Showing 186 open source projects for "clip-4-win"

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  • 1
    The purpose of this program is to provide the user with a convenient algorithm for automatic Independent Component (IC) selection with respect to the contributions of the ICs to a certain event-related brain potential (ERP). www.jan-wessel.de
    Downloads: 0 This Week
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  • 2
    MAT-MECAS

    MAT-MECAS

    Cell impedance analysis software.

    MAT-MECAS is used for calculation of impedance parameters of a cell from recorded current responses elicited by bipolar voltage stimuli in a whole-cell patch-clamp experiment. The calculations are based on a FFT deconvolution procedure and on approximation of the reconstructed currents with a theoretical function. The impulse response of the signal path is necessary for the calculations. Read manual first! For testing MAT-MECAS we provide a sample data along with sample stimulation protocols.
    Downloads: 0 This Week
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  • 3

    BioRec:Bird Census field data annotation

    Recognizing biological data from a notebook.

    This project helps to digitize field data for a certain Bird Census method. Namely, bird census based on personal inspection or small (~10 km^2) regions with recording birds' position and behaviour on paper. This project makes it easy to annotate such field data and to make this data available for statistical analysis.
    Downloads: 0 This Week
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  • 4

    AnalyzeNNLS

    MRI Multiple Echo T2 Analysis

    Users load multiecho MRI data and draw ROIs. AnalyzeNNLS creates a T2 distribution from the averaged decay data. Regional fractions and geometric T2 times can be determined. Please reference: Bjarnason TA, Mitchell JR. JMR 206:200-4 (2010). Temporal Phase Correction included in version 2.5. If you use this functionality, please reference: Bjarnason TA, Laule C, Bluman J, Kozlowski P. JMR 232:22-31 (2013).
    Downloads: 2 This Week
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  • 5

    Tensiomet

    A MATLAB compatible library for surface stress measurements

    Tensiomet is a library of MATLAB functions and procedures that helps to conduct pendant drop measurements and to post process acquired data. Its focus is elastomery, to recover material parameters of elastic interfacial layers.
    Downloads: 7 This Week
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  • 6

    diauxic growth model ensemble

    An ensemble of models showing diauxic growth behavior

    ... be categorized according to regulatory, stoichiometric, and physiological constraints and differ from each other on only a single aspect. We distinguish four groups of models: (1) flux balance models that only define reaction kinetics for substrate uptake and by-product excretion, (2) kinetic models without and (3) kinetic models with regulation on the metabolic and/or genetic level, and (4) resource allocation models.
    Downloads: 0 This Week
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  • 7

    detectMITE

    Detection of Miniature Inverted Repeat Transposable Elements

    ... and Imperfect Inverted Repeats Using Complex Numbers and Vector Calculation. PLoS ONE 9(11): e113349. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0113349 [3] detectMITE user manual Please visit the Wiki page of this website. [4] detectMITE Q&A For Q&A, please visit the Blog page of this website. [5] Update history To see the update history, go to https://sourceforge.net/p/detectmite/wiki/UpdateHistory/
    Downloads: 0 This Week
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  • 8
    SoundRuler is a tool for acoustic analysis, graphing and teaching. It interactively recognizes and measures 35 temporal and spectral properties of each sound in a file. It also features several measurement, graphing and didactic modules.
    Downloads: 3 This Week
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  • 9

    GPMfit

    Gaussian Process Model Fitting

    Gaussian Process model for fitting deterministic simulator output. Establish efficient and reliable likelihood optimization through hybridized DIRECT-BFGS and multi-start BFGS algorithms. Programming Language: Matlab.
    Downloads: 0 This Week
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  • 10
    TraceX

    TraceX

    MatLab App for calculating fitting isotopic exchange profile data

    MatLab App for calculating fitting isotopic exchange profile data. Developed for measuring self-diffusivity and effective surface exchange coefficient of ion conducting materials. Requires MatLab image processing toolbox If you use this tool for you research, please cite my PhD thesis: Cooper, S. J. Quantifying the Transport Properties of Solid Oxide Fuel Cell Electrodes. (Imperial College London, 2015). @phdthesis{SJCooper2015, author = {Cooper, S. J.}, number =...
    Downloads: 0 This Week
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  • 11
    Volterra2.0

    Volterra2.0

    Volterra series Identification Tool

    ... of Volterra series identified with a cross-correlation method. DOI:10.1007/s11071-014-1631-7. pp.2861-2869. In NONLINEAR DYNAMICS - ISSN:0924-090X vol. 78 (4) 2014.
    Downloads: 0 This Week
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  • 12
    This project houses software to analyze data acquired from electrophysiology experiments. Currently, we have an Octave/MATLAB program to analyze electroneurogram traces of coupled oscillators, and a Perl library for the analysis of voltage trace data
    Downloads: 0 This Week
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  • 13
    Density-ratio based clustering

    Density-ratio based clustering

    Discovering clusters with varying densities

    This site provides the source code of two approaches for density-ratio based clustering, used for discovering clusters with varying densities. One approach is to modify a density-based clustering algorithm to do density-ratio based clustering by using its density estimator to compute density-ratio. The other approach involves rescaling the given dataset only. An existing density-based clustering algorithm, which is applied to the rescaled dataset, can find all clusters with varying...
    Downloads: 0 This Week
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  • 14
    Mass-based dissimilarity

    Mass-based dissimilarity

    A data dependent dissimilarity measure based on mass estimation.

    This software calculates the mass-based dissimilarity matrix for data mining algorithms relying on a distance measure. References: Overcoming Key Weaknesses of Distance-based Neighbourhood Methods using a Data Dependent Dissimilarity Measure. KDD 2016 http://dx.doi.org/10.1145/2939672.2939779 The source code, presentation slide and poster are attached under "Files". The presentation video in KDD 2016 is published on https://youtu.be/eotD_-SuEoo . Since this software is licensed...
    Downloads: 0 This Week
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  • 15
    VibroToolbox is a tool for research and education in vibrometry. Test your audio equipment, describe responses to vibratory stimulation and analyze directionality. It works with precision i/o hardware or simple sound cards, various sensors and speakers.
    Downloads: 0 This Week
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  • 16
    RAFTS3

    RAFTS3

    Rapid Alignment Free Tool for Sequences Similarity Search

    RAFTS3 can perform high-speed protein search comparisons locally using a desktop computer or laptop. RAFTS3 performed searches many times faster than those with BLASTp against large protein databases such as NR and Pfam, with a small loss of sensitivity depending on the similarity degree of the sequences. RAFTS3 is a new alternative for fast comparison of protein sequences, genome annotation and biological data mining. Preprint: http://dx.doi.org/10.1101/055269 Precomputed databases...
    Downloads: 0 This Week
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  • 17
    Yet Another Audio Feature Extractor is a toolbox for audio analysis. Easy to use and efficient at extracting a large number of audio features simultaneously. WAV and MP3 files supported, or embedding in C++, Python or Matlab applications.
    Downloads: 1 This Week
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  • 18
    OpenSegSPIM

    OpenSegSPIM

    OpenSegSPIM

    OpenSegSPIM
    Downloads: 0 This Week
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  • 19
    SPIW - Scanning Probe Image Wizard

    SPIW - Scanning Probe Image Wizard

    Scanning Probe Image Wizard - MATLAB Toolbox

    SPIW is a MATLAB toolbox, for automated processing of scanning probe microscope images. Tools are applicable to all SPM images, but the main focus is on images with atomic or molecular resolution. SPIW is primarily a MATLAB toolbox with functions designed to be called in a user's own script. SPIW also has a very basic GUI for browsing and exporting images. For information on SPIW's performance see our publication ( http://dx.doi.org/10.1063/1.4827076 ) in the Review of Scientific...
    Downloads: 0 This Week
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  • 20
    MATAA (Mat's Audio Analyzer) is a flexible and versatile audio analysis system based on Matlab or GNU Octave. MATAA was removed from SourceForge. Please visit https://github.com/mbrennwa/mataa for further information.
    Downloads: 0 This Week
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  • 21
    NiftyRec
    This project, developed at UCL London, provides code for tomographic reconstruction. NiftyRec is written in C and has Python and Matlab extensions. Computationally intensive functions have a GPU accelerated version based on CUDA.
    Downloads: 2 This Week
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  • 22
    lasYmat provides a set of Matlab routines for reading and writing LAS files. LAS is a world wide Oil & Gas industry standard for distribution of Well Log data.
    Downloads: 0 This Week
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  • 23
    IDL2Matlab is an Automatic translation tool from an IDL program into Matlab and Scilab code. We do not guaranty a 100% conversion efficiency.
    Downloads: 6 This Week
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  • 24

    EyeBallGUI

    a tool for interactively viewing & marking multi-channel biosignals

    EyeBallGUI: a tool for interactively viewing and marking multi-channel bio-signals for artefacts. The purpose of EyeBallGUI is to facilitate the eyeballing of multi-channel biosignals for the purpose of artefact rejection (or any other binary grouping). EyeBallGUI displays a set of time-series signals in a MATLAB Figure window, allowing the user to visually inspect and interact with the data via the mouse and keyboard in order to mark data as bad/rejected. The tool can be used to...
    Downloads: 0 This Week
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  • 25

    SCRalyze

    A matlab environment for model-based psychophysiology

    SCRalyze is a powerful tool for model-based analysis of psychophysiological signals, using linear convolution models and dynamic causal modelling. A flexible import interface and many utilities make this software a standalone tool. IMPORTANT: As of 04.11.2019, the official code repository for PsPM (formerly SCRalyze) has been moved to https://github.com/bachlab/PsPM . In order to check the latest releases, discussion and bug reports, please refer to our new repository. Although this...
    Downloads: 1 This Week
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