Search Results for "graphs"
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Showing 134 open source projects for "graphs"
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Build Agents and Models on One PlatformGemini Enterprise Agent Platform is Google Cloud's comprehensive platform for developers to build, scale, govern, and optimize agents and models. Choose from Google's most advanced models and third-party models like Anthropic's Claude Model Family.
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Algebraic graphs
Algebraic graphs
Alga is a library for algebraic construction and manipulation of graphs in Haskell. See this Haskell Symposium paper and the corresponding talk for the motivation behind the library, the underlying theory and implementation details. We can give semantics to the constructors in terms of the pair (V, E) of graph vertices and edges. Alga can handle graphs comprising millions of vertices and billions of edges in a matter of seconds, which is fast enough for many applications. ... -
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PyTorch Geometric
Geometric deep learning extension library for PyTorch
It consists of various methods for deep learning on graphs and other irregular structures, also known as geometric deep learning, from a variety of published papers. In addition, it consists of an easy-to-use mini-batch loader for many small and single giant graphs, a large number of common benchmark datasets (based on simple interfaces to create your own), and helpful transforms, both for learning on arbitrary graphs as well as on 3D meshes or point clouds. -
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Dagger.jl
A framework for out-of-core and parallel execution
Dagger.jl is a framework for out-of-core and parallel computing in Julia that allows users to construct and execute dynamic task graphs. It is designed for large-scale, distributed, and memory-efficient computations. Dagger supports lazy evaluation and scheduling across multiple threads or machines, enabling high-performance workflows for data processing, scientific computing, and machine learning. -
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SuiteSparseGraphBLAS.jl
Sparse, General Linear Algebra for Graphs
A fast, general sparse linear algebra and graph computation package, based on SuiteSparse:GraphBLAS. -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Benchee
Easy and extensible benchmarking in Elixir
...Benchee allows you to compare the performance of different pieces of code at a glance. It is also versatile and extensible, relying only on functions. There are also a bunch of plugins to draw pretty graphs and more! Benchee runs each of your functions for a given amount of time after an initial warmup, it then measures their run time and optionally memory consumption. It then shows different statistical values like average, standard deviation etc. The aforementioned plugins like benchee_html make it possible to generate nice-looking HTML reports, where individual graphs can also be exported as PNG images. first runs the functions for a given warmup time without recording the results, to simulate a "warm"/running system. ... -
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PyTorch Geometric Temporal
Spatiotemporal Signal Processing with Neural Machine Learning Models
The library consists of various dynamic and temporal geometric deep learning, embedding, and Spatio-temporal regression methods from a variety of published research papers. Moreover, it comes with an easy-to-use dataset loader, train-test splitter and temporal snaphot iterator for dynamic and temporal graphs. The framework naturally provides GPU support. It also comes with a number of benchmark datasets from the epidemiological forecasting, sharing economy, energy production and web traffic management domains. Finally, you can also create your own datasets. The package interfaces well with Pytorch Lightning which allows training on CPUs, single and multiple GPUs out-of-the-box. ... -
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GPXSee
GPS log file viewer and analyzer
GPS log file viewer and analyzer with support for GPX, TCX, KML, FIT, IGC, NMEA, SLF, SML, LOC, GPI, GeoJSON and OziExplorer files. -
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Digraph3
A collection of python3 modules for Algorithmic Decision Theory
...Technical documentation and tutorials are available under the following link: https://digraph3.readthedocs.io/en/latest/ The tutorials introduce the main objects like digraphs, outranking digraphs and performance tableaux. There is also a tutorial provided on undirected graphs. Some tutorials are problem oriented and show how to compute the winner of an election, how to build a best choice recommendation, or how to linearly rank or rate with multiple incommensurable performance criteria. Other tutorials concern more specifically operational aspects of computing maximal independent sets (MISs) and kernels in graphs and digraphs. -
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JGraphT is a free Java class library that provides mathematical graph-theory objects and algorithms. JGraphT supports a rich gallery of graphs and is designed to be powerful, extensible, and easy to use.
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Minsky
System dynamics program with additional features for economics
Minsky brings system dynamics and monetary modelling to economics. Models are defined using flowcharts on a drawing canvas (as are Matlab's Simulink, Vensim, Stella, etc). Minsky's unique feature is the "Godley Table", which uses double entry bookkeeping to generate stock-flow consistent models of financial flows. Minsky is good for demonstrating mathematics too, with the most "math-like" interface in system dynamics. Sign up to Minsky's Patreon page (for as little as $1 a month) at... -
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Euler Math Toolbox
Numerical and Symbolic Math Tool
Euler is a powerful all-in-one numerical software and includes Maxima for seamless symbolic computations. Euler supports Latex for math display, Povray for photo-realistic 3D scenes, Python, Matplotlib and C for scripting, and contains a full programming language. Features include libraries for numerical algorithms, optimization, plotting in 2D and 3D, graphics export, a complete help system, tutorials and examples. Euler runs in Windows natively, or in Linux via Wine. It is completely... -
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In addition to computing co-expression clusters, Maccu fishes potential co-expressed genes for a given bait set. All results can be further processed via graph-level operations so that we can compare graphs based on different reference data.
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Tempico software
Software to control and analyze Tausand Tempico timing data
Tempico Software is designed to control the Tausand Tempico TP1004 and TP1204 devices, a time-to-digital converter that captures temporal differences from a common start signal across multiple channels. The software generates histograms from captured data, supports lifetime measurements via single-photon correlation (SPC), and displays real-time graphs with adjustable fitting options. It includes a 'Counts Estimation' panel to estimate count rates per channel over time, and a 'Time Stamping' feature to record timing of events. Users can view, configure, and control the device directly from the application, as well as save both raw data and graphical results for later analysis. ... -
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GeigerLog
Python program for Geiger counters and Environmental Sensors
...Continues to support Geiger counters like GQ Electronic's GMC-300/500/600 , RadMon, RadPro, Gamma-Scout, audio-click and other low-cost Geiger counters, IoT devices, I2C based sensors, GQ EMF devices. GeigerLog reads data from devices, saves them to databases, prints to screen and plots as auto-updated, customizable graphs. Quality control using Statistics, Scatter, Poisson, FFT & Autocorrelation, and more. Gamma Spectra - can be displayed, calibrated, and evaluated in GeigerLog! The Raspberry Pi 4, 5 qualify as GeigerLog hosts. -
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JaxoDraw
JaxoDraw: Feynman Diagrams made easy!
JaxoDraw is a tool to generate Feynman diagrams in a mouse click-and-drag fashion. Graphs can be exported to a variety of graphics formats and arbitrary latex code can be used for labels to produce high-quality publishing-style figures. -
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Foucault Analyzer 2.0
automation tool to analyze Foucault test results of parabolic mirrors
This software is a remake of Foucault Test Image Analyzer created by Dejan Vucinic and published on SourceForge at 2002 (https://sourceforge.net/projects/foucault/). "If you are an amateur telescope maker, this software can take the tedium out of measuring the shape of your mirror." -
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Abacus software
Software to control and analyze Tausand Abacus coincidence devices
Abacus Software is a specialized tool for controlling and analyzing Tausand Abacus devices (AB1002, AB1004, AB1502, AB1504, AB2502, and AB2504). It enables precise measurement of temporal coincidences with up to 2-nanosecond resolution, and real-time visualization of count data from one, two, or three channels simultaneously. The software includes advanced features such as adjustable line width, sampling time configuration, direct device settings control, and the ability to save both raw... -
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UnBBayes
Framework & GUI for Bayes Nets and other probabilistic models.
UnBBayes is a probabilistic network framework written in Java. It has both a GUI and an API with inference, sampling, learning and evaluation. It supports Bayesian networks, influence diagrams, MSBN, OOBN, HBN, MEBN/PR-OWL, PRM, structure, parameter and incremental learning. Please, visit our wiki (https://sourceforge.net/p/unbbayes/wiki/Home/) for more information. Check out the license section (https://sourceforge.net/p/unbbayes/wiki/License/) for our licensing policy. -
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TAVIA
Open statistics and scientific graphing
TAVIA is a desktop application for structured data analysis, visualization, reporting, and reproducible research workflows. It combines spreadsheet-style data handling with statistical tools, publication-ready graphs, confidence intervals, project files, encrypted storage, audit trails, workflow automation, and extensible plugins. The application includes CSV, TSV, XLSX, and SQLite import and export, customizable chart styles, confidence bands, error bars, report generation, generated analysis scripts, parameter sweeps, and a documented plugin API with a starter template. ... -
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PlateEditor
PlateEditor, a free web application to work with multi-well plates
PlateEditor is a free web application to work with multi-well plates, from creation of layouts to data visualization and aggregation. It is primarily designed as a tool to help scientists working in the field of biology to simplify and fasten the process of data analysis. It is fully client-side: files are never transferred to the server, ensuring complete security and privacy of research data. It doesn't require any installation. - PlateEditor is available at this... -
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Statistics101 - Resampling Statistics
Use simulation to perform statistical analyses.
Statistics101 is an Integrated Development Environment (IDE) that uses a simple, powerful language called “Resampling Stats” to develop Monte Carlo programs to analyze and solve statistical problems. The original Resampling Stats language and computer program were developed by Dr. Julian Simon (https://www.juliansimon.com/) and Peter Bruce (https://www.scientificamerican.com/author/peter-bruce/) as a new way to teach Statistics to social science students. Of course, social science students... -
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GNU Gluco Control (GGC) is diabetes management application. It helps managing user's daily data, food data. Has graphs, statistics, printing, diabetes devices support (meter, pump, CGMS). It works on any platform supporting at least Java 5 (1.5). Our repo moved to GIT (click on tab Git Code), Lowest supported Java now is 1.8 and project code base is in process of redesign (updating libraries and ways how application is built and run). IMPORTANT: Project was moved to GitHub: https://github.com/andyrozman/ggc on 4th April 2024
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SGraph
Create charts by retrieving data from Stata on-the-fly
SGraph is a web application that interacts with Stata for creating graphs. It is a demo application that demostrates how to exploit SWire for creating web applications that communicate with Stata. SGraph is an open source project and you can download the code from the project web site web site or try the app on-line here: http://sgraph-with-swire.sourceforge.net/ The source project is hosted in GitHub: https://github.com/lomagno/sgraph -
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Funiter (FUNction ITERation) is developed for educational purposes, generating graphs of several types for iteration of real and complex functions with comfortable switching between related types of graphs.
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FastQC
A quality control analysis tool for high throughput sequencing data
FastQC is a quality control analysis tool designed to spot potential problems in high throughput sequencing datasets. Its goal is to provide a simple way by which to check the quality of raw sequence data coming from high throughput sequencing pipelines. It does this by running a modular set of analyses on one or more raw sequence files in fastq or bam format. It then produces a report summarizing the results, and highlighting any areas where the library may appear unusual. This should then...
