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Tifad is a framework to deal with Natural Gas (NG) dispatching for thermoelectrical generation networks. Project blog can be browsed here: https://tifadframework.wordpress.com/
MathJax is a modular javascript framework for including mathematics in web pages. It can take input in various formats, like TeX and MathML, and can produce output in various forms, such as MathML or HTML-with-CSS. Components are loaded as needed.
PheMaDB is a web-based data management system to store and analyze OmniLog Phenotype Microarray data. The manuscript can be accessed here: http://www.biomedcentral.com/1471-2105/12/109. Chang WE et al. BMC Bioinformatics. 2011 Apr 20;12(1):109.
VI Compute Server (VICS) is a collection of grid-enabled bioinformatics tools with HTTP (browser) and Web Services (scriptable) interfaces. JCVI VICS is licensed under the Perl Foundation Artistic License 2.0.
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A database and a web front end for physiologic data on animal feeding, developed with PostgreSQL and Django at NESCent (http://www.nescent.org) for Mammalian Feeding Working Group (http://www.feedexp.org).
Current development of the codebase is on Github at http://github.com/NESCent/feedingdb.
Biomedical Information Management System (BIMS) is a modular multilayer object - oriented software architecture, which provides a flexible computational solution to capture and manage a heterogeneous biomedical data: textual and visual information.
Geomajas is a web mapping GIS software with full vectorial editing capabilities, and support for custom attribute relation models in the browser. It has built-in support for any type of query, selection, filtering, snapping, printing, ...
HELEN is a flexible framework to support the computer-based management of Clinical Practice Guidelines (CPG). It covers the whole life-cycle of a guideline, providing methods and tools for each step (from development to clinical use).
The GPDE is a biological protein database based on the PRIDE xml format. It combines proteomics experiments based on the investigated cell type and creates a biological meta-analysis. Try it out at http://www.meduniwien.ac.at/proteomics/database.
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The Dragon Fire compiler takes a new, 21st century, look at the Dragon (i.e. Dragon Book). No longer impenetrable to the programmer, this compiler is open and available to them. You control the Dragon, and get Dragon insight into your programs.
VarPlan is a web application to visualize and manage variants as tree like graph view. The approach is to keep the overview on hundreds of variants with their meta informations.
Fast search using a standard SQL on Oracle or PostgreSQL database. The package includes the database creator, loader and web application. It supports SMILES and SMARTS substructure searches, similarity search, stereochemistry.
Conference Information System Stuttgart (ConfISS) is a conference management system to host conferences. It helps conference chairmen to administrate their conferences, reviewers to write their reviews and authors to easily submit their papers.
Free software tools released by the Virtual Institute for Microbial Stress and Survival, including WIST (a toolkit for LIMS development) and PCAPStore (a file repository for LIMS).
CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74
Basic Electronical Medical Management (BEMM) is an application to control medical data of a set of patients. It is built on top of open source technologies, to provide an integration skeleton of mvn, Datanucleus, Spring, Vaadin, Acceleo technologies.
Aigaion is a php/mysql based multi-user system for managing annotated bibliographies. It allows the user(s) to order publications in a self-chosen (overlapping) topic structure, offers BibTex and RIS import and export and has an intuitive user interface.
Currently looking for contributors and co-maintainer(s) to handle planned upcoming releases. Check http://www.aigaion.de for more.
Support and Documentation can be found at http://www.aigaion.de.
Connecting Historical Authorities with Links, Contexts and Entities. CHALICE is a historic placename gazetteer for the UK, published as Linked Data and linked to other widely-used sources of placename reference information on the semantic web.
Ciclope Astro is a Web 2.0 application to control an astronomical observatory (telescopes, cameras, domes, etc.). It contains other tools as album (folksonomy & votes), forum, news (RSS), karma system. Developed using the Google Web Toolkit framework.
EXTE recognizes temporal expressions in a text. Temporal expressions are any references to the TIME e.g.: "today", "12th march 2006", "as soon as he woke up". This analyzer will recognize three languages: Spanish, English and French.
tXtFL is a strategy-based football simulator. Teams can be created from real stats on the web, built through custom designed plays, and then used to coach games or predict scores. Note that as of 2010, all new development is taking place at http://textflex.com/txtfl.
EHR/EMR cross-platform electronic medical record application
EHR/EMR cross-platform software for the design, implementation and use of autonomous, open, database models for multilingual medical knowledge management systems from primary care to continuing care.
Example-based Modeling (EMO) is an tool to create data models, with examples, using a web interface. You interactively create a web-accessible database of models and samples for those models. A white paper describes the underlying assumptions.