Showing 379 open source projects for "java file transfer"

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  • 1

    Quadriga

    Quadruple Network Management System

    Quadriga is a web-application that acts as a clearing-house for text annotations -- in the form of contextualized triples, or “quadruples,” that form complex graphs -- generated with the Vogon desktop application (https://sourceforge.net/projects/gobtan/), and as an environment for managing text-annotation projects. It relies on a central authentication system for user authentication, a dictionary service (Wordpower) and an authority file service (Conceptpower). Quadriga can connect to a...
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  • 2

    obstbaumpate

    Obstbaum Verwaltung

    Mit dem Obstbaumpaten lassen sich einfach Obstbäume an Wegesrändern verwalten.
    Downloads: 0 This Week
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  • 3

    Cost-sensitive Classifiers

    Adaboost extensions for cost-sentive classification

    Adaboost extensions for cost-sentive classification CSExtension 1 CSExtension 2 CSExtension 3 CSExtension 4 CSExtension 5 AdaCost Boost CostBoost Uboost CostUBoost AdaBoostM1 Implementation of all the listed algorithms of the cluster "cost-sensitive classification". They are the meta algorithms which requires base algorithms e.g. Decision Tree Moreover, Voting criteria is also required e.g. Minimum expected cost criteria Input also requires to load an arff file and a...
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  • 4
    This package contains code for use with Short Read DNA Sequencing technologies, and includes packages for ChIP-Seq, Whole Transcriptome Shotgun Sequencing, Whole Genome Shotgun Sequencing, SNP Detection, Transcript expression and file conversion.
    Downloads: 4 This Week
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  • 5
    An easy-to-use simulator for decentralized distributed scheduling in Clusters, Grids, and Cloud ecosystem MaGate 2.0 is now available from github! https://github.com/huangye177/magate
    Downloads: 0 This Week
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  • 6
    Framework for text mining, data integration and data analysis. Keywords: ontology and graph alignment, relation mining, warehouse, semantic database integration, bioinformatics, systems biology, microarray, Java.
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  • 7

    Cylindrical BLAST Viewer

    Alignments in Rotating Cylinder / 3D

    3D viewer which arranges BLAST hits and other bioinformatics-related alignments in a rotating, cylindrical display. Feedback appreciated. NOTE: requires Java3d installation. Superceded by Cylindrical Alignment App
    Downloads: 0 This Week
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  • 8
    AJT is a set of utility classes for Java for handling some bioinformatics data, graphics file export, GUI widgets, and classes that should long have been added to the official Java API.
    Downloads: 0 This Week
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  • 9
    gannu

    gannu

    Java API and tools for performing NLP and other AI tasks

    Java API and tools for performing a wide range of AI tasks such as: word sense disambiguation (released), optimization (5 Evolutionary Algorithms Implemented ETA February 2014), opinion mining (ETA November 2014) and text wikification (ETA July 2014). Gannu includes some graphical interfaces for scientific purposes. When using Gannu please cite: *Jiménez, F.
    Downloads: 0 This Week
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  • 10
    Unsupervised TXT classifier

    Unsupervised TXT classifier

    Classify any two TXT documents, no training required - JAVA

    This program is made to address two most common issues with the known classifying algorithms. First, over-training and second, shortage of data for a training of categories. Instead, each TXT file is a category on its own, rather than an assigned category. In a way, this is similar to clustering but not really a clustering algorithm since there is some training involved. The summarizer from Classifier4J has been adjusted to accept two inputs (lets call them A and B). Then, the summarizer...
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  • 11
    E.N.M.L. means Environmental Noise Model Language. The target of the project is the definition of a XML specification model mainly devoted to electronic acoustic data exchange. ENML aims to format ANY kind of noise measurement.
    Downloads: 0 This Week
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  • 12

    Systems Glycobiology

    Glycosylation Network Analysis Toolbox (GNAT)

    GNAT is an open source, platform-independent MATLAB based toolbox. It is written in MATLAB and Java. It has been tested in Windows (Windows 7), Linux (Ubuntu), and Mac OS (X Lion) platforms. The original GNAT package (file GNAT.zip) provides functions for reading, writing, manipulation, visualization and simulation of glycan structures and glycosylation reaction networks (citation [1]). The second version of this software (GNATv2beta.zip) upgrades the original GNAT program with additional features that are geared towards incorporating glycan-structure experimental data into the simulation environment. ...
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  • 13
    Specview is a Java GUI_based application for 1-D spectral visualization and analysis of astronomical spectrograms generated by a variety of observatories and instruments. Note that we no longer provide file distributions of this software. You are encouraged to visit the specview web site download page: http://www.stsci.edu/institute/software_hardware/specview/download to retrieve an installer appropriate for your platform.
    Downloads: 2 This Week
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  • 14

    ORIPA S

    A drawer for origami crease pattern

    ORIPA S is a drawing tool specifically designed for a origami crease pattern. It is derived from ORIPA which is developed by MITANI Jun. New features by ORIPA S are: - save current crease pattern as a image file (jpeg, png) not only original project file. - while pasting, select a point on pattern to be matched against destination point. - Some considerable bugs are fixed (i.e., wrong undo behavior on ORIPA v0.35). This program is free software: you can redistribute it and/or...
    Downloads: 6 This Week
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  • 15

    FishingCNV

    Copy number variation (CNV) detection in exome sequencing data

    FishingCNV, a software tool developed at McGill University, is a tool for comprehensive analysis of rare copy number variations in high-throughput exome sequencing data. The inputs are standard coverage files produced by Genome Analysis ToolKit (GATK), and the output is a file containing putative CNVs. The program comes in 2 different releases * GUI version (FishingCNV_X.X.X.zip) * Command line version (FishingCNV_X.X_pipeline) Browse through our files to find the different releases.
    Downloads: 0 This Week
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  • 16
    RouteConverter is another route conversion tool. It helps me and I hope it could help you.
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  • 17
    Myrtle

    Myrtle

    A simple programmable spreadsheet for learning statistics.

    Myrtle is a simple programmable spreadsheet and statistical analysis software specifically designed for learning statistics. It provides the standard spreadsheet functionality one would expect like multiple tabbed sheets, relative and absolute row and column referencing in formulas, and a large catalog of built-in functions. Functions specific to logic and computer science, mathematics, probability, and statistics are available. Student's can easily create, customize, and update plots and...
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  • 18

    MSTParser

    MSTParser is a non-projective dependency parser that searches for maxi

    MSTParser is a non-projective dependency parser that searches for maximum spanning trees over directed graphs. Models of dependency structure are based on large-margin discriminative training methods. Projective parsing is also supported. mstparser 0.5.1 is now available via Maven Central. If you use Maven as your build tool, then you can add it as a dependency in your pom.xml file: <dependency> <groupId>net.sourceforge.mstparser</groupId> <artifactId>mstparser</artifactId> ...
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  • 19

    GComb

    GComb is a gCode viewing tool with an interior focus

    GComb is an open-source quick and easy Java tool intended to ease the lives of all 3D printing hobbyists by providing a look inside a “sliced” GCode file and a better view of what is going to be printed, before it is printed. It works by parsing GCode files and producing an image for each layer of the printed object, any of which can then be viewed. GComb was originally written on Mac OS X using Eclipse with Java version 1.7.0_25, and was made for a Makerbot™ The Replicator Dual printing Skeinforge 50-generated GCode files. ...
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  • 20

    OMR Reader

    OMR Sheets Data Retrieval Software

    OMR Reader is an application to read data from scanned images of OMR sheets. You can first create a template for a particular form and save it as a .omr file. To create a template, use a form with all filled marks. The program will automatically detect the marks. Now choose the marks for a group, and name the group. Do this for all the option groups on the form. Now save the info of these groups in a .omr file. For different forms, you can have different .omr files. These files can later be...
    Downloads: 5 This Week
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  • 21

    SMLEditor

    Prototype editor for the SDEM Mapping Language

    The Gateways Team of the Live-Virtual-Constructive Architecture Roadmap Implementation (LVCAR-I) effort is developing a set of tools that will support the gateway community. One of these tools is the Simulation Data Exchange Model (SDEM) Mapping Language (SML) Editor. The tool provides the ability to import two SDEMs in their native language and subsequently view the entities that need to be mapped between the two SDEMs. The SDEM Editor also allows the user to create these mappings and...
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  • 22

    MiniKakofonix

    Asterix UDP multicast recorder

    This program is capable of subscribing to an UDP multicast feed containing (live) radar data in Eurocontrol Asterix format. The received UDP frames are stored in a recording file. A new (raw) Asterix recording file can be created every x minutes. The previously recorded Asterix filename contains date and timestamp. This tool can be used to do continuous 24/7 Asterix multicast recordings.
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  • 23
    Fast Decimals to Fractions
    This is the downloadable JAVA version of Fast Decimals to Fractions, so you no longer need to log on to convert your decimals. Must have JAVA to run the .JAR file.
    Downloads: 0 This Week
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  • 24
    PIVOT

    PIVOT

    PIVOT is a simple yet flexible visualization data tool

    PIVOT is a simple yet flexible visualization tool based on Circos (Krzywinski et al., 2009), which offers a fast and aesthetical visualization of data and information. The Protein Interaction Visualization and Observation Tool (PIVOT) was developed specifically for the visualization of protein interaction. It is difficult to spot the proteins that have an interaction when given a large list of proteins but with PIVOT, it is easy to identify the them at a glance. PIVOT displays an image...
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  • 25

    DeNovoCheck

    DeNovoCheck: Inheritance analysis for NGS trio data

    DeNovoCheck is intended to be used for inheritance analysis in NGS tio data. For rare dominant Mendelian diseases, patient-parent trios are often used to reduce the number of candidate variants. The algorithm bases the inheritance prediction on the data available in the parental BAM files and allows for a fast and reliable selection of potential de novo variants.
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