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GODASM is the brief of ".Gff Organized Data Analysis System for Microarray Studies". Private programs, GODA system, had been successful developed in 2008 at CGMH,Taiwan. Now the project will transfer GODAs to open-source based system.
The application for tracking a mobile devices, similar to google mobile maps but enhanced about many additional new features including a web service where
a user will be able to track registered mobile devices from a web browser.
HATS (Haplotype Amplification in Tumor Sequences) is a tool that calls the amplified alleles, and thus amplified haplotype, in copy number aberration regions in next generation sequencing tumor data. The amplified haplotype may reveal gene variants.
Numerical math is tool that demonstrates numerical math methods. It includes following areas: interpolation, numerical differentiation, numerical integration, root finding, linear systems, non-linear systems, differential equations.
CSGCAD is a CAD application written in Qt/C++ that renders 3D graphics using a constructive solid geometry engine based on GLSL. This application is still far from completion, help is welcome
Tifad is a framework to deal with Natural Gas (NG) dispatching for thermoelectrical generation networks. Project blog can be browsed here: https://tifadframework.wordpress.com/
SWARD (System for Weapon Allocation Research and Development) is a testbed for benchmarking weapon allocation algorithms against each other. It is intended for researchers within operations research, information fusion, and related areas.
Enrich and query corpora in the TEI-XML vocabulary. CorpusReader manage very large corpora and corpora containing milestone annotation. It provides tools for enriching corpora with output of linguistic parsers, and for extracting quantitative information
TagSEA is a framework for tagging locations of interest within Eclipse. Visit our project page for more information - including downloads and documentation: tagsea.sourceforge.net
A program to calculate and create lists of possible variations (permutations) and selections (combinations) of a given set of elements. Creating the cartesian product of two sets is also possible.
Cougar Squared is a new Java library for machine learning and data mining research, supporting research needs of the community. It is written by researchers for researchers. It extends the WEKA and YALE machine learning frameworks.
TMAJ is software for Tissue MicroArrays (TMA's). Patients, specimens, blocks, slides, cores, images, and scores can all be stored and viewed. Features include advanced security, custom dynamic fields, and an image analysis program.
The system searches synonyms (and related words) in Wikipedia. WikIDF generates index database of Wikipedia (for Russian, English, and German). The continuation of this project is "wikokit" at code.google.com
This is my first attempt at building a reusable framework for 3D applications (not an engine!), primarily for educational purpose and also because none of the already existing tools did satisfy me. No longer maintained.
Java based multi-agent platform built on an organizational model (agent, group, role). MadKit provides general agent facilities (lifecycle management, message passing, distribution, ...), and allows high heterogeneity in agents.
Editor for formal grammars. Attempts to be universal – customizable for any grammatical formalism and any syntax. Provides features such as syntax checking and highlighting, transformations (refactoring) and advanced rule editor.
VI Compute Server (VICS) is a collection of grid-enabled bioinformatics tools with HTTP (browser) and Web Services (scriptable) interfaces. JCVI VICS is licensed under the Perl Foundation Artistic License 2.0.