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RADAR stands for Rapid Automatic Detection and Alignment of Repeats in protein sequences. RADAR identifies gapped approximate repeats and complex repeat architectures involving many different types of repeats.
Radar has moved to github (https://github.com/AndreasHeger/radar)
ConDEnSE (Confidential Data Enabled Statistical Exploration) will be a web-based environment for statistical analysis of confidential data from various database sources, based on Plone and R, and using the Jackknife method of confidentiality protection.
A simple project which attempts to emulate real life in the launching of a trebuchet. Requires a python compiler, and the python modules for math, gtk, pygame, random, and numpy. Please note: this is an early version and is in alpha.
Spyse is a software framework for building multi-agent systems. It allows Python developers to build distributed intelligent systems of multiple cooperative agents based on FIPA, OWL, SOA and many others. Spyse is designed for ease-of-use and fun.
OmicBrowse, developed with Flash and Java, is a highly evaluated genome browser integrating omics knowledge ranging from genomes to phenomes and is especially appropriate for positional-cloning purposes.
A web-based system for upoading, managing, sharing, and analyzing bioinformatic data. The system is primarily written in python, and runs on both linux and MacOs.
A colorized interactive dotplot program designed for pair-wise comparisons of RNA & DNA. The original idea was from the mind of late Prof. William J. Dreyer of Caltech. The idea is to be able to see the "tapestry" of life, which comes alive with color.
FociCounter is a simple and user-friendly program for analysis of gamma-H2AX foci. It allows to determine the number of foci in a single cell, a foci intensity as well as a cell intensity.
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Bauteile Manager ist eine Webanwendung zur Verwaltung für elektronische Bauteile! Die Modifikationen von Michael Steinsträßer DD4MS beruhen auf der unter GPL veröffentlichten "part-db 0.1c" von Christoph Lechner!
phpMyVisites is a Web traffic analyzer with very detailed reports and advanced graphics. It is not an Apache log analysis tool. phpMyVisites creates its own logs, and it allows access to more complete statistics. phpMyVisites provides information about v
MATmute is a MATLAB code mutation system targeted at developers of scientific software. The package includes a mutator, a MATLAB function to call the mutator and run the mutants, and some examples to demonstrate how to use the system.
Use SASSIE to generate and manipulate large numbers of molecular structures and then calculate the SAXS, SANS, and neutron reflectivity profiles from atomistic structures. Use for intrinsically disordered proteins. We need alpha-testers and developers.
Everyday Software for the Researcher of Restricted Means: This project is intended to offer scientists and students with small budgets advanced versions of aqua-built desktop-editing, graphics and statistical applications for MacOSX.
Website plugin that plots visitors counts from various cities on a Google Earth element. This product includes GeoLite data created by MaxMind, available from http://maxmind.com/
Use of USB to Serial and USB to Parallel BUS CONVERTERS available from ElectronicBRICKS at http://electronicbricks.blogspot.com/search/label/usb-Brick.
The scikits.timeseries python module provides classes and functions for manipulating, reporting, and plotting time series of various frequencies. The focus is on convenient data access while leveraging the existing functionality in numpy.
IMathAS is a web-based math assessment and homework system. It is a course/learning management system (CMS/LMS/VLE) and testing system featuring algorithmic questions, similar to WebWork, Webassign, and publisher systems like iLrn, MathXL, etc.
This is a reference implementation of snoBAC, a Bayesian Classifier designed to predict box H/ACA snoRNAs in Caenorhabditis nematode genomes. For details of algorithm and data, see Wang and Ruvinsky (2009) RNA in press.
pyOBD-II (a.k.a. "pyobd2") is a Python library for communicating with OBD-II vehicles. Its goal is to make writing programs for vehicle diagnostics and monitoring vehicle data as easy as possible. Relies on pySerial to communicate with ELM scanners.
Geographic information system to register and classify illegal waste dumping sites.
Goals:
- Make the mapping process easy and fun;
- Provide real-time information on web.
This software is a GIS, they permit contextualize the information and the extrapolation of knowledge. Permit to calculate the distribution of blood donors and cross reference this with the places of collect.