Search Results for "open source assembly software source code" - Page 25
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Showing 3104 open source projects for "open source assembly software source code"
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MANTIS R Package
Multi-locus ANTIgenic Simulator R-package for multi-strain pathogens
This repository contains the most updated code version of MANTIS, the Multi-locus ANTIgenic Simulator R-package. MANTIS is developed and maintained by the Evolutionary Ecology of Infectious Disease (EEID) research group at the Department of Zoology, University of Oxford, UK. For theoretical background please refer to 'MANTIS: an R package that simulates multilocus models of pathogen evolution' (https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0598-9 OPEN ACCESS) At the moment, MANTIS is not available on CRAN. ... -
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Accent Tool Suite
Accent interfaces and controls systems through goals and policies
Accent (Advanced Component Control Enhancing Network Technologies) is a comprehensive tool suite that interfaces a variety of communications systems and allows these systems to be controlled through goals (high-level user aims) and policies (lower-level system rules). Accent has been applied to the domains of: o Call Control: for telecommunications, particularly call control in Internet telephony o Home Care: for home automation and telecare, particularly for domestic appliances... -
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OpenEmergency
"OpenEmergency - Open source helping you save lives!"
The goal of OpenEmergency is to provide software for organizations that typically are unable to afford commercial level software (i.e. volunteer organizations or small providers). keywords: ambulance, dispatch, EMS, 911, police, fire, emergency, ambulanc -
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Terra Incognita
GPS mapping and management software
Program for downloading web source maps or local files maps for various programs or GPS devices. Terra Incognita™ main features: navigating through map by simple clicking generating OziExplorer, Kmz, JNX, GPSdash or TrekBuddy calibrated map file possibility to use many web map sources Google Maps™, Bing™, Open street map ... managing of waypoints or tracks saved in gpx and many other formats selected user defined map area for saving simplified and easy user... -
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Eclipse Verilog editor is a plugin for the Eclipse IDE. It provides Verilog(IEEE-1364) and VHDL language specific code viewer, contents outline, code assist etc. It helps coding and debugging in hardware development based on Verilog or VHDL.
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GDL - GNU Data Language, a free IDL (Interactive Data Language, see http://ittvis.com/idl/) compatible incremental compiler.
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TimescapeGlobal
a space-time interpolation geostatistical tool
This software is a time-aware geostatistical tool. Including time variability adds further issues to the already complicated field of geostatistical interpolation. On the other hand, most of the distributions of variables used in Earth and environmental sciences show patterns of change over time, not only in space. This tool is a free, open-source software, based on a generalization of the Inverse Distance Weighted algorithm. -
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D-Tailor
D-Tailor: automated analysis and design of DNA sequences
Recent advances in DNA cloning and synthesis technologies afford high throughput implementation of designed sequences into living cells. However, our ability to design sequences to interrogate multifactorial biological processes and further engineer biological functions is lagging behind. DNA-Tailor (D-Tailor) is a fully extendable software framework for biological sequence analysis and multi-objective sequence design. D-Tailor permits the seamless integration of an arbitrary number of... -
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CSBB-v3.0
CSBB - Computational Suite for Bioinformaticians and Biologists
CSBB is a command line-based bioinformatics suite to analyze biological data acquired through varied avenues of biological experiments. CSBB is implemented in Perl, while it also leverages the use of R, java, python and ruby in background for specific modules. Major focus of CSBB is to allow users from biology and bioinformatics community, to get benefited by performing down-stream analysis tasks while eliminating the need to write programming code. CSBB is currently available on Linux,... -
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MScheme
Scheme Interpreter implemented in Java
MScheme is a Scheme interpreter implemented in Java. The project goals are to fully comply with the "Revised^5 Report on Scheme" and a clean and modular design. -
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A shell for using the methods of Contextual Logic to do qualitative data analysis, mathematical research on the theory underlying Conceptual Knowledge Processing, or learning Formal Concept Analysis. It uses the framework provided by the Tockit project..
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CSBB-v2.1 [CSBB-v3.0 is now available]
Computational Suite For Bioinformaticians and Biologists
CSBB is a command line based bioinformatics suite to analyze biological data acquired through varied avenues of biological experiments. CSBB is implemented in Perl, while it also leverages the use of R, java and ruby in background for specific modules. Major focus of CSBB is to allow users from biology and bioinformatics community, to get benefited by performing down-stream analysis tasks while eliminating the need to write programming code. CSBB is currently available on Linux, UNIX and... -
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WireFactory Simulator
Small factory simulator for control logic test purpose
Wire Factory Simulator (WFS) is a free software to simulate the control of a factory, mainly controlled by IEC 61499 applications. You can build your own factory and controller. The controller can be implemented on any programming language. WFS was originally built to simulate the action of an IEC 614999 application. So, the devices in the factory are easily connected to IEC 61499 applications. The WFS were mainly tested with FBDK (http://www.holobloc.com/). Wire Factory has been... -
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BWTT
BIOTACT Whisker Tracking Tool
The BWTT is an artefact of the EU Framework 7 Project BIOTACT 215910. It is an extensible software framework that runs under Matlab (Mathworks, TM) providing for the computation of whisker tracking algorithms for small mammal observation. Other tracking algorithms (e.g. snout tracking) can also be included. The software is released with a number of algorithms included, allowing rapid whisker tracking with no other software required (other than Matlab). -
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Mapyrus is software to plot Geographic Information System data to PostScript, PDF, SVG and web image files. Mapyrus combines a BASIC-like scripting language, reading GIS datasets and running as either a utility program, a Java Servlet, or as a webser
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SleepyHead
Open Source CPAP Research and Review Software
Open-source, cross platform, sleep tracking software with a focus on monitoring CPAP treatment. Please see http://sleepyhead.jedimark.net for official release information and latest downloads. -
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ProteoWizard development moved to GitHub in 2018. The ProteoWizard Library is a set of software libraries and tools for rapid development of proteomics data analysis software. The libraries are cross-platform and built from the ground up using modern C++ techniques.
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Palette Designer
A color-code design tool
Palette Designer facilitates designing color codes for electronic visual displays that comply with established human factors usability principles. It calculates colorimetric figures of merit for a user-specified color set and flags colors and color combinations that may be problematic. It also draws figures that help users visualize important characteristics of the color set and find ways to improve it. It can be used by itself or in conjunction with software that uses aesthetic... -
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This site hosts the source code for C++ version of the Broker for SBW, NOM module, advanced simulation suite, analysis applications and model editors.
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transitfeed
Tools for reading, validating & writing transit schedule info in GTFS
transitfeed helps to make public transit information projects more successful for agencies and other interested parties. It provides a library to help you parse, validate, and generate General Transit Feed Spec (GTFS) feed files. It contains several parts, including TransitFeed (Python package for reading, writing, and validating feeds); Feedvalidator (command line tool that checks a GTFS feed for problems); ScheduleViewer (application for exploring a feed on a map) and more; each with their... -
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owfs and owhttpd
Project moved to https://github.com/owfs/owfs/
Please note that OWFS source code, and all Issue/Tickets/merge requests have now been moved to https://github.com/owfs/owfs/. Developer mailing lists will still be kept at Sourceforge. ---- OWFS -- 1-Wire file system. Use the Dallas 1-Wire and iButton chips with standard filesystem commands. Create temperature loggers. Monitor everything. OWHTTPD -- same system, only used as a light weight web server. OWFS is also ported to embedded routers, Mac OSX and Windows. Basically you can use... -
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The Teachingbox uses advanced machine learning techniques to relieve developers from the programming of hand-crafted sophisticated behaviors of autonomous agents (such as robots, game players etc...) In the current status we have implemented a well founded reinforcement learning core in Java with many popular usecases, environments, policies and learners. Obtaining the teachingbox: FOR USERS: If you want to download the latest releases, please visit:...
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HIGH-THROUGHPUT TABULAR DATA PROCESSOR (HTDP) is Java application that is intended to facilitate data exploration and reduction tasks in large text files resulting from high throughput technologies, e.g. massively parallel sequencing or microarrays. The software has been optimized for microarray and deep parallel sequencing data, however it can accept any character delimited tabular data sets. HTDP can also import, process and convert Variant Call Format (VCF) files ver. 4.0, 4.1 and 4.2...
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macosx_gpib_lib
Porting of linux-gpib to Mac os x
This project aims to provide some missing GPIB function to Mac Os X. It focuses only on unsupported 82357 GPIB adapter but can be extended to other USB boards if there is a need for that in the future. The code is mainly based on linux-gpib and includes also code from fxload for mac project. This project generates a dynamic library which can be linked against any kind of application which support dylib. It also comes with a python wrapper. macosx_gpib_lib is not a kernel extension... -
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Finita
Package for solving PDE systems numerically
Finita is a software package for solving complex algebraic/differential systems of equations numerically using various grid methods.