Showing 1359 open source projects for "sql command line"

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  • 1
    openGPS
    Open Source Implementations for 3D-Surface Characterisation Algorithms according to ISO 25178 (Geometric Product Specification) in verifiable pseudocode (MATLAB). Implementation of an XML-based file exchange format according to upcoming ISO 25178-72.
    Downloads: 0 This Week
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  • 2

    slycat

    Web-based data science analysis and visualization platform.

    This is Slycat - a web-based data science analysis and visualization platform, created at Sandia National Laboratories. The goal of the Slycat project is to develop processes, tools and techniques to support data science, particularly analysis of large, high-dimensional data.
    Downloads: 0 This Week
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  • 3

    JUnit Execution & Report Generation Tool

    Runs JUnit Test cases and generate HTML report, keeps past run history

    This tool pulls all JUnit testcases from the class path and run them all. After completion of test case execution it populates the result in database tables. A report tool fetch the result data from database and produce an HTML report. Highlights of this tool - No coding effort is required from developer to integrate existing JUnit test cases. They just need to put their test case folder to the class path - Since it keep the test result data in a database, it can keep history of...
    Downloads: 0 This Week
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  • 4
    vipR is a program to screen for sequence variants (SNPs, deletions) in sequence data generated by high-throughput-sequencing platforms. Information on this and other projects can be found on: http://www.altmann.eu
    Downloads: 0 This Week
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  • 5

    modDFS

    Find whether a KEGG module is complete in a proteome

    Given module definitions and reaction information based on a KEGG database, modDFS does a depth first search to find whether a set of KOs are sufficient for completion of a module. For cases where only 1 absent KO would've been enough for module completion, that module is reported to be complete(only lenient). For cyclic modules, completion is defined as having all the module reaction steps present. Again, lenient completion cases are reported. Also, all absent reactions are reported so that...
    Downloads: 1 This Week
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  • 6
    Pulse Programmer
    A programmable signal generator and RF synthesizer for scientific experiments, especially quantum computing and quantum information processing. It includes hardware, firmware, software, and documentation, all under an open source license.
    Downloads: 0 This Week
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  • 7
    GTfold
    A Scalable Multicore Code for RNA Secondary Structure Prediction
    Downloads: 0 This Week
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  • 8
    Tab2MAGE uses a flexible spreadsheet format for MIAME annotation of microarray experiments. Tab2MAGE spreadsheets may be submitted directly to ArrayExpress, or used to generate MAGE-ML for data exchange.
    Downloads: 0 This Week
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  • 9
    Graph-RAT
    Graph-RAT is a database abstraction layer designed to make it easy to use a large library of graph-analysis routines on a database as well as add new kinds of algorithms to data mining.
    Downloads: 0 This Week
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  • 10
    The MAGE-TAB Utilities project provides a simple Perl SDK for parsing, manipulating, visualizing and exporting data in MAGE-TAB format. All file releases are now being made via CPAN.
    Downloads: 0 This Week
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  • 11
    PatchCatcher

    PatchCatcher

    Software for Patchwriting Detection

    PatchCatcher uses suffix arrays to detect common types of patchwriting among scientific papers.
    Downloads: 0 This Week
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  • 12

    dl141th

    Configure / read out the DL-141TH data logger

    The DL-141TH temperature/humidity data logger comes with a proprietary software which has a quite large footprint and is only available for Windows, but not for Linux. This project provides - a description of the USB/serial protocol - a python script to configure / read out the DL-141TH data logger which can be used at least from Windows and Linux
    Downloads: 0 This Week
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  • 13

    Average

    Command-line calculator of basic statistics.

    Average is a simple and fast command-line Perl utility for calculating basic statistics on a list of numbers (one number per line). It works as a traditional Unix filter and can be used as part of those greatly useful chains of piped commands. It calculates average (arithmetic mean), standard deviation, median, total sum, minimum and maximum values present, and shows the number of processed numbers.
    Downloads: 0 This Week
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  • 14

    x2fasta

    Tools for reformatting common sequence formats into fasta

    A collection of tools to transform common biosequence formats (e.g. EMBL, SWISS-PROT, UniProtKB, GenBank and RefSeq) into the fasta sequence format.
    Downloads: 0 This Week
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  • 15
    This is a simple software for performing various statistical and mathematical operations on single ASCII data-files. Entire file is read into an array, which is then analyzed. Number of columns is detected automatically.
    Downloads: 0 This Week
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  • 16
    SPADE

    SPADE

    A toolkit for developing and deploying protein structure algorithms.

    The Structural Proteomics Application Development Environment is a Python tool kit for developing and deploying bioinformatics applications. Handles graphics, analysis, and modeling of protein sequence and structure. Source and Win installers available. SPADE source code can be cloned from http://www.github.com/deaconjs/SPADE.
    Downloads: 2 This Week
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  • 17
    yorick

    yorick

    scientific programming language and graphics

    Yorick is an interpreted programming language for scientific simulations or calculations, postprocessing or steering large simulation codes, interactive scientific graphics, and reading, writing, or translating large files of numbers.
    Downloads: 3 This Week
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  • 18
    IRPF90
    WARNING: Project moved to http://github.com/scemama/irpf90 IRPF90 is a Fortran90 preprocessor written in Python for programming using the Implicit Reference to Parameters (IRP) method. It simplifies the development of large fortran codes in the field of scientific high performance computing.
    Downloads: 0 This Week
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  • 19
    The National Library of New Zealand's Metadata Extraction Tool automatically extracts preservation-related metadata from digital files, then output that metadata in XML formats. It can be used through a graphical user interface or command-line interface. Please take the latest code from 'https://github.com/DIA-NZ/Metadata-Extraction-Tool.git'. The code on source forge will not be updated henceforth as it is moved to github.
    Downloads: 2 This Week
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  • 20
    Fast Finite Element Method implementation in native MATLAB.
    Downloads: 0 This Week
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  • 21
    Phylogenetic software that implements the algorithms "Fast Computation of Distance Estimators" and "Fast Neighbor Joining".
    Downloads: 0 This Week
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  • 22
    Graphical Grammar Studio

    Graphical Grammar Studio

    An user friendly grammar tool for natural language processing tasks

    Full documentation with tutorials is included in the download package. Graphical Grammar Studio is a tool for applying grammars which behave as words acceptors/consumers and annotators. GGS grammars can be used to find and annotate sequences of words which respect certain conditions, in a given input. Its purpose is for creating NLP tools like phrase chunkers, named entity finders, pronoun co-reference solvers etc. A grammar is represented by a state machine which can be visualized, edited...
    Downloads: 0 This Week
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  • 23
    PHDL

    PHDL

    An HDL alternative to PCB graphical schematic capture tools.

    ...The language is compiled into a pcb netlist which can then be imported into a layout tool. We are currently on version 2.1 of the tool. We have created an eclipse plugin version of the tool as well as a standalone command-line based version. Both function identically and output a netlist that can be imported into a pcb layout tool. VHDL revolutionized how FPGA designs and digital logic circuits have been designed and captured and overcame many of the difficulties associated with the use of schematic editing tools. We believe the use of an HDL is also the way of the future when it comes to PCB design. ...
    Downloads: 0 This Week
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  • 24

    datadensityplot

    Creates a data density plot of a 2 dimensional data distribution.

    Shows the data density of a 2 dimensional distribution. The problem of showing data density visually is not mathematically well defined, and there are several methods. The program uses sum of reciprocal squared distance to calculate density at each point, with a smear factor to prevent points going to infinity. The smear factor also controls the amount of clustering. There are several options for colour output. Input is via a csv (comma-separated values) file. Now there's a nice GUI...
    Downloads: 0 This Week
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  • 25
    A collection of software made by Milos Rancic.
    Downloads: 0 This Week
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