Showing 1469 open source projects for "compiler python linux"

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  • 1
    PortOpt

    PortOpt

    A portfolio-optimizer using Markowitz(1952) mean-variance model

    PortOpt [Portfolio Optimizer] is a C++ program (with Python binding) implementing the Markowitz(1952) mean-variance model with agent's linear indifference curves toward risk in order to find the optimal assets portfolio under risk. You have to provide PortOpt (in text files or - if you use the api - using your own code) the variance/covariance matrix of the assets, their average returns and the agent risk preference. It returns the vector of assets' shares that composes the optimal...
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  • 2
    iMSAT
    iMSAT represents a full update of the vcf2MSAT program. This command line python program allows for a user to use the polymorphism data generated using SAM- and BAM-tools and a .fasta alignment file to search for polymorphic microsatellite markers (MSATs or STRs). By identifying polymorphic makers, rather than simple repeat regions as previous programs have done, iMSAT greatly increases the speed at which polymorphic MSATs that can be identified -- saving researchers precious time and...
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  • 3

    Hydraulic(fluid power) programs

    Python programs for various hydraulic(fluid power) calculations

    General hydraulic calculations. Cylinder selection and calculations. Multiple cylinder sequencing with graph output. Tubing selection and calculations. Viscosity graphing for various oils. DC Valve flow vs. pressure drop calculations.
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  • 4

    SAT-Assembler

    Scalable and accurate targeted gene assembly for large-scale NGS data

    SAT-Assembler is a scalable and accurate gene assembly tool for large-scale RNA-Seq and metagenomic data. It recovers genes from gene families of particular interest to biologists with high coverage, low chimera rate, and extremely low memory usage compared with exiting gene assembly tools. Moreover, it is naturally compatible with parallel computing platforms.
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  • 5

    ViennaCL

    Linear algebra and solver library using CUDA, OpenCL, and OpenMP

    ViennaCL provides high level C++ interfaces for linear algebra routines on CPUs and GPUs using CUDA, OpenCL, and OpenMP. The focus is on generic implementations of iterative solvers often used for large linear systems and simple integration into existing projects.
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    Downloads: 14 This Week
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  • 6
    PyRadmon Reborn

    PyRadmon Reborn

    PyRadmon, a Python script to use on both Linux and Windows.

    PyRadmon Reborn. This project started after the original programmers quit supporting it. The project now contains support for audio*, has a version that supports two Geiger counters** and a cleaner, more stable code. * = PyAudio is used as library for the audio support. ** = The two counters both run in their own thread. UPDATE-2015-2: * Added timeouts to sockets to prevent crashing of the script. * Updated some comments. UPDATE-2015-1: Since there have been some passed time...
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  • 7
    SyMAT

    SyMAT

    Old SyMAT releases

    This is an archive of old releases of SyMAT. The latest version is found at the official website.
    Downloads: 0 This Week
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  • 8
    RoiView
    Explore InSAR data and more
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  • 9
    Python Control Systems Library

    Python Control Systems Library

    Feedback control system analysis and design

    The Python Control Systems Library, python-control, is a python module that implements basic operations for analysis and design of feedback control systems. This homepage for this project is at http://python-control.org and the code base in maintained at https://github.com/python-control/python-control. Information on this page is out of date, but left here for posterity.
    Downloads: 2 This Week
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  • 10
    SPIW - Scanning Probe Image Wizard

    SPIW - Scanning Probe Image Wizard

    Scanning Probe Image Wizard - MATLAB Toolbox

    SPIW is a MATLAB toolbox, for automated processing of scanning probe microscope images. Tools are applicable to all SPM images, but the main focus is on images with atomic or molecular resolution. SPIW is primarily a MATLAB toolbox with functions designed to be called in a user's own script. SPIW also has a very basic GUI for browsing and exporting images. For information on SPIW's performance see our publication ( http://dx.doi.org/10.1063/1.4827076 ) in the Review of Scientific...
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  • 11
    This project concerns the development of human language technology resources, based on the approach to share or recycle resources between closely related language. http://gerhard.pro/closely-related-languages/
    Downloads: 0 This Week
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  • 12

    ENLY

    Bioinformatic tool to improve draft genome assemblies by closing gaps

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  • 13
    Orfeo ToolBox

    Orfeo ToolBox

    OTB is an open-source C++ library for remote sensing images processing

    The Orfeo Toolbox is a C++ library for high resolution remote sensing image processing. It is developped by CNES in the frame of the ORFEO program. More information is available at www.orfeo-toolbox.org It is based on the medical image processing library ITK and offers particular functionalities for remote sensing image processing in general and for high spatial resolution images in particular. Targeted algorithms for high resolution optical images (SPOT, Quickbird, Worldview, Landsat,...
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    Downloads: 5 This Week
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  • 14
    NiftyRec
    This project, developed at UCL London, provides code for tomographic reconstruction. NiftyRec is written in C and has Python and Matlab extensions. Computationally intensive functions have a GPU accelerated version based on CUDA.
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  • 15

    autodiff

    Python class for automatic differentiation

    Python automatic differentiation class for forward mode automatic differentiation using operator overloading and reimplemented math functions. Single and partial derivatives are supported. Supported operators: +, -, *, /, **, +=, -=, *=, /=, **= Available functions: sin, cos, tan, asin, acos, atan, sqrt, exp, log, log10, sinh, cosh, tanh, asinh, acosh, atanh See README file for usage examples.
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  • 16
    pyQPCR
    pyQPCR is a GUI application written in python that deals with quantitative PCR (QPCR) raw data. Using quantification cycle values extracted from QPCR instruments, it uses a proven and universally applicable model to give finalized quantification resu
    Downloads: 5 This Week
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  • 17
    ASPI Kit
    # ASPI Kit - Adaptive Identification and Control Software This software is under development by the ASPICC group. Its purpose is to allow users to learn and experiment the use of Neural Networks (NN's) and related Computational Intelligence algorithms on their own data. Users can upload their own data and experiment with various algorithms of various setups to see how the algorithms performs on their data. Users can also investigate and familiarize themselves with the Python code of...
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  • 18
    ChIP-RNA-seqPRO

    ChIP-RNA-seqPRO

    ChIP-RNA-sequencing-processing (ChIP-RNA-seqPRO)

    ChIP-RNA-seqPRO: A strategy for identifying regions of epigenetic deregulation associated with aberrant transcript splicing and RNA-editing sites. Runnable python scripts packaged together with customized annotation libraries, demo data input and README guide. 9/26 : v1.1 Updated MAIN_IV to debug error thrown by python pandas no longer supporting 'subset'. This code will no longer be actively maintained/updated here. A cloud-based resource for comparative analysis of epigenetic,...
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  • 19
    SteppedStateMachine

    SteppedStateMachine

    Creates and operates a stepped state machine

    Implements a stepped state machine, i.e. a state machine which executes a single state transition at a time. Because of this, no data, e.g. state data, can be stored between executions. Instead, any such data must be stored in persistent storage between executions. This permits operation of the state machine as a CGI program in a web server. A WSGI or fastCGI or other such web server is not required. Received symbols may be received from sources outside the state machine, or may be...
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  • 20
    ASN.1 library for Python
    ASN.1 types and codecs (BER, CER, DER) implementation in Python programming language. A collection of various ASN.1-based protocols data structures is supplied in a dedicated Python package. Project moved to GitHub: https://github.com/etingof/pyasn1
    Downloads: 0 This Week
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  • 21
    ExSTraCS

    ExSTraCS

    Extended Supervised Tracking and Classifying System

    This advanced machine learning algorithm is a Michigan-style learning classifier system (LCS) developed to specialize in classification, prediction, data mining, and knowledge discovery tasks. Michigan-style LCS algorithms constitute a unique class of algorithms that distribute learned patterns over a collaborative population of of individually interpretable IF:THEN rules, allowing them to flexibly and effectively describe complex and diverse problem spaces. ExSTraCS was primarily developed...
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  • 22

    PyRate

    Bayesian Estimation of Speciation and Extinction from Fossil Data

    PyRate is a Python program to estimate speciation, extinction, and preservation rates from fossil occurrence data using a Bayesian framework. The method was described by D Silvestro, J Schnitzler, LH Liow, A Antonelli, and N Salamin in Systematic Biology (http://sysbio.oxfordjournals.org/content/early/2014/02/08/sysbio.syu006.abstract). *Please download the most up-to-date code from the "PyRate code" tab on this page or from: https://github.com/dsilvestro/PyRate * *An updated manual...
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  • 23

    Point Cloud Skinner for Blender

    Python script (addon) for Blender to skin point cloud (verts to face).

    What is Point Cloud Skinner? This is a Python script for Blender 2.6x or later and allows you to create a surface from just a cloud of vertices. You can get a complete 3D mesh with faces on it out of just a point cloud that has only vertices and no faces. Please watch the video to get the idea of what the script can do for your artwork. Features: This script, Point Cloud Skinner can skin a cloud of vertices, which means to create a 3D surfaced mesh out of just a cloud of vertices...
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    Downloads: 46 This Week
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  • 24
    Analysis software for Nbody/SPH or SPH simulations (e.g. performed with Gadget II). See http://sourceforge.net/apps/wordpress/hyplot/about and http://sourceforge.net/apps/trac/hyplot/wiki for more information.
    Downloads: 0 This Week
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  • 25
    The General Hidden Markov Model Library (GHMM) is a C library with additional Python bindings implementing a wide range of types of Hidden Markov Models and algorithms: discrete, continous emissions, basic training, HMM clustering, HMM mixtures.
    Downloads: 6 This Week
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