Showing 3935 open source projects for "java projects on linux"

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  • 1

    TEESer

    Tool for Engineering Emergent Selforganizing bEhavioR

    Teeser is a java-based integration framework for engineering emergent self-organizing behavior in distributed systems. It contains tools for analysis, tuning, macroscopic probing and simulations of distributed systems. Library of tools can be extended and everybody is encouraged to provide and share its tools with the community. The main idea is to provide application designers ability to seamlessly use tools which are helpful to design self-organizing behavior. Designers can continue to...
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  • 2
    medSLT - The Medical Speech Translator
    Downloads: 0 This Week
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  • 3
    QualityControlForRadiology

    QualityControlForRadiology

    QC tests and patient doses from radiodiagnostic XRay equipment

    This software performs various quality control tests for XRay devices used in radiography, mammography, fluoroscopy and CT such as: HVL/tube filtration, high voltage, exposure time, tube output, MTF calculations, film sensitometry, AEC devices and more. It also compute patient doses using an external program based on the GEANT4 simulation toolkit. This program is found here: https://sourceforge.net/projects/doseinhumanbody/ Read the "README" file for details. Source code and...
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  • 4
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  • 5
    DACO-algorithm

    DACO-algorithm

    A novel transcription factor complex prediction algorithm.

    Eukaryotic gene expression is controlled through molecular logic circuits that combine regulatory signals of many different factors. Complexation of transcription factors and other regulatory proteins is a prevailing and highly conserved mechanism of signal integration within critical regulatory pathways and enable to infer controlled genes as well as the exerted regulatory mechanism. We developed DACO (domain-aware cohesiveness optimization), a novel algorithm that combines...
    Downloads: 11 This Week
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  • 6

    Ghawwas_V4

    An open source system for Arabic corpora processing

    Ghawwas (previously known as Khawas) is an open source system for Arabic corpora processing. Ghawwas V4.0 provides the following main functions: a. Frequency list for single word and N-Grams b. Concordance c. Collocation (MI, CHI Squared, LL, T-Score, Z Score, Dice, Log Dice, Weirdness Coefficient) d. Lexical patterns search e. Two corpora frequency profile comparison based on MI, CHI, LL, T-Score, Z Score, Dice, Log Dice, Weirdness Coefficient f. Accept Windows and UTF-8 character...
    Downloads: 5 This Week
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  • 7
    An implementation of the INDI protocol in Java
    Downloads: 0 This Week
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  • 8

    mirplant

    miRPlant: An Integrated Tool for Identification of Plant miRNA

    please cite: An J, Lai J, Sajjanhar A, Lehman ML, Nelson CC: miRPlant: an integrated tool for identification of plant miRNA from RNA sequencing data. BMC bioinformatics 2014, 15(1):275. We will create index for you if you tell us your interested plants (j.an@qut.edu.au).
    Downloads: 7 This Week
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  • 9

    my 3D Projects

    A number of DIY 3D projects

    Here you will find a number of projects that compliment my other sites, as well as new stuff. I have tried to combine electronic circuits with 3D printing and easy to build DIY projects. STILL UNDER CONSTRUCTION At present the following 3D projects can be found here -ESP3D A DIY project that adds Wifi capability to the Tevo Tarantula. -myLogicProbe A DIY project that is a logic probe useful for testing digitial circuits. -myMotorDesigns Currently 3 DIY projects using common...
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  • 10
    DrawWKT

    DrawWKT

    View your WKT geometries

    Small and powerful! Write one or several WKT geometries on the text box, and visualize them in a click. Alternatively, draw the geometries in the drawing panel and you will have the WKT in the text box. You can also write your geometry readers and import your geometries in any format.
    Downloads: 0 This Week
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  • 11
    GMOL

    GMOL

    A tool for 3D genome structure visualization

    GMOL is an application designed to visualize genome structure in 3D. It allows users to view the genome structure at multiple scales, including: global, chromosome, loci, fiber, nucleosome, and nucleotide. This software was built upon the pre-existing Jmol package by Prof. Cheng's group. The software is developed in Prof. Jianlin Cheng's Bioinformatics, Data Mining and Machine Learning Laboratory in the Computer Science Department at the University of Missouri - Columbia, USA. The project...
    Downloads: 1 This Week
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  • 12
    seqMINER
    A genome wide mapping data interpretation platform for NGS(ChIPSeq). A tutorial can be found at: http://genomeast.igbmc.fr/wiki/doku.php?id=training:seqminer
    Downloads: 4 This Week
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  • 13
    PatientKAPRecords

    PatientKAPRecords

    KAP evaluation and patient records in radiodiagnostic

    This program tries to help radiologists to keep track of patients which receive radiation doses (measured, or computed, free in air) from radiodiagnostic examinations. It performs computation of KAP (kerma-area-product if it is not recorded by a dedicated DAP-meter) and record the patient information. The program also generates elegant reports which can be converted as pdf, xls etc. Source code included in jar files. Also, available on GitHub: https://github.com/ZiliasTheSaint/PatientRxRecord.git
    Downloads: 0 This Week
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  • 14
    JBotSim is a multipurpose dynamic network simulator that allows to quickly prototype a distributed algorithm and test its behavior on a set of static or mobile nodes. If mobile, the nodes can be controlled by the mouse or by program.
    Downloads: 0 This Week
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  • 15
    Jenetics: Java Genetic Algorithm Library
    The source code has been migrated and is now hosted on Github: https://github.com/jenetics/jenetics Jenetics is an advanced Genetic Algorithm, Evolutionary Algorithm and Genetic Programming library, respectively, written in modern day Java. It is designed with a clear separation of the several algorithm concepts, e. g. Gene, Chromosome, Genotype, Phenotype, Population and fitness Function. Jenetics allows you to minimize or maximize the given fitness function without tweaking it. In...
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  • 16
    Effectopedia
    Effectopedia is open knowledge aggregation and collaboration tool that provides a means of describing adverse outcome pathways in encyclopedic manner.
    Downloads: 0 This Week
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  • 17
    JLibModbus - Java Modbus Library

    JLibModbus - Java Modbus Library

    A modbus library implemented in Java.

    JLibModbus is an implementation of the Modbus protocol v1.1b in java language. The library supports the most popular communication libraries (jssc, rxtx, jSerialComm, purejavacomm, java comm api); Maven dependency: <dependency> <groupId>com.intelligt.modbus</groupId> <artifactId>jlibmodbus</artifactId> <version>1.2.9.7</version> </dependency> Implemented MODBUS functions: 0x01 Read Coils 0x02 Read Discrete Inputs 0x03 Read Holding Registers 0x04 Read Input...
    Downloads: 10 This Week
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  • 18
    Mavscript

    Mavscript

    Calculations in a text document

    Mavscript allows the user to do calculations in a text document. Plain text, LaTeX and OpenOffice Writer files (.odt) are supported. The calculation is done by the algebra system Yacas (default), Jasymca or by the Java interpreter BeanShell.
    Downloads: 0 This Week
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  • 19
    OpenStreetMap Website Viewer

    OpenStreetMap Website Viewer

    Shows local Websites from OpenStreetMap

    The OSM Website Viewer shows a Map. With + and - Button you zoom in and out. Clicking on the Map moves the clicked Point to the middle of the Map. The @ Button open your Browser an show a List of local Websites
    Downloads: 0 This Week
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  • 20

    Fudaa

    https://gitlab.com/fudaa

    Official site: https://fudaa-project.atlassian.net/wiki/spaces/FUDAA/overview Sources moved to GitLab: https://gitlab.com/fudaa
    Downloads: 0 This Week
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  • 21
    Active Intelligence Server

    Active Intelligence Server

    Reporting, Dashboarding, Analytic, Self-service BI, Ad-hoc reporting

    Active Intelligence Server 2 (AIS) is a data visualization tool and fully featured reporting server which enable users from open source community to host any reports created using BIRT, Jasper and Pentaho community edition allowing organization to leverage open source technologies and enable them to use AIS as a reporting server to deploy their existing and new reports seamlessly onto AIS for secure sharing the information in different file formats and schedule to make system automation and...
    Downloads: 0 This Week
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  • 22
    RadiationHelper

    RadiationHelper

    Alpha, Beta, Gamma measurements and Nuclide exposure

    RadiationHelper is a data analysis tool for : 1. gross alpha and beta radiation measurement and detector calibration using experimental data (counts acquired by alpha-beta devices). 2. gamma spectroscopy measurements and detector calibration using experimental data (spectra acquired by acquisition software such as Assayer, Gamma Vision, Maestro) 3. gross alpha,beta, gamma detector efficiencies and gamma peak efficiency can be theoretical computed using Monte-Carlo simulation technique...
    Downloads: 0 This Week
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  • 23
    openCONFIGURATOR

    openCONFIGURATOR

    An Open Source POWERLINK network configuration toolkit

    ...For XDD tooling and validation support within eclipse please visit: https://goo.gl/NBytgg Please use the update site to install the plugin in your eclipse environment: http://sourceforge.net/projects/eclipse-plugin.openconf.p/files/update-site/ KNOWN ISSUE WITH THE UPDATE SITE DUE TO SOURCEFORGE ENCRYPTION POLICIES: https://goo.gl/kVr2ZZ Install via Eclipse marketplace: http://goo.gl/vweJ9h User Manual: https://goo.gl/viGd5P For Linux distributions with Boost 1.54.0 please use: https://goo.gl/hMRTss For Linux distributions with Boost 1.61.0 please use: https://goo.gl/ZSvW7C
    Downloads: 18 This Week
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  • 24
    SMSD

    SMSD

    SMSD is a Java based software library for calculating MCS.

    SMSD is a Java based software library for calculating Maximum Common Subgraph (MCS) between small molecules. This will help us to find similarity/distance between two molecules. MCS is also used for screening drug like compounds by hitting molecules, which share common subgraph (substructure).
    Downloads: 0 This Week
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  • 25
    BEAST

    BEAST

    BEAST is a tool dedicated to assess political goals of woody bioenergy

    The BioEnergy Allocation and Simulation Tool (BEAST) is a tool dedicated to assess political goals of woody bioenergy production in the context of available biomass potentials and corresponding economic and ecological criteria on a regional level. It is a useful tool in participative decision making processes by iterative simulation and visualization of complex issues. BEAST is a data- and model-driven Decision Support System (DSS) evaluating woody biomass potentials from forests, hedges...
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