Search Results for "labeling"
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Showing 25 open source projects for "labeling"
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Segments.ai
Segments.ai Python SDK
Multi-sensor labeling platform for robotics and autonomous vehicles. The platform for fast and accurate multi-sensor data annotation. Label in-house or with an external workforce. Intuitive labeling interfaces for images, videos, and 3D point clouds (lidar and RGBD). Obtain segmentation labels, vector labels, and more. Our labeling interfaces are set up to label fast and precise. -
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H9A
H9A counts how many times a digit appears in any range, instantly.
H9A is an installable Python package that counts how many times a given digit appears in a range of numbers (by default: the digit 9 between 1 and 100). It provides both a h9a command-line tool and an importable library, and it prints each step of the calculation — the per-place counts and the combined total — as styled, colorized output. It is built with rich for console formatting, pyfiglet for an ASCII-art banner, and Pillow for optional terminal-style screenshots. -
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iElectrodes
intracranial electrodes localization toolbox
iElectrodes is a free and open-source Matlab® toolbox to obtain intracranial electrode coordinates from MRI and CT images. Precise and reliable localization can be achieved fast and in a semiautomatic way with minimal user intervention. The toolbox works with ECoG (subdural grids and strips) and SEEG (depth) electrodes. The new GridFit algorithm can precisely localize high-density electrodes (up to 3mm). Brain parcellations (atlas) and surfaces can be imported to aid 2D and 3D... -
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GraficaFunzioni
mathematical function plotting and real-time analysis
...Built with Swing without heavy external libraries, it features a custom recursive parsing engine that respects operator precedence (+,-,*,/). Features: dynamic Cartesian graphing, adaptive grid zooming/labeling, numerical differentiation (plots the 1st derivative in blue), and definite integration (Riemann sums with text output and transparent blue geometric shading under the curve). Includes angle unit toggle (Rad/Deg) and a portable stand-alone version with bundled JRE. [IT] GraficoAR è un'app Java leggera per lo studio e il tracciamento di funzioni matematiche 2D. ... -
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MANTI
MANTI - Mastering Advanced N-Termini Interpretation
MANTI is a one-stop shop N-termini annotation & evaluation solution. MANTI was previously (un)known as muda.pl ahead of v3.7, the project was renamed to MANTI.pl with v3.7 on 2019-06-24. It congregates information from different MaxQuant or DiaNN/MSFragger output files into a master file suitable explicitly for protein neo-termini analyses. The central anchor for the data congregation is the modificationSpecificPeptides.txt or diann-output.pr_matrix.tsv file - additional data is inferred... -
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Tranalyzer
Tranalyzer flow generator packet analyzer moved to: tranalyzer.com
...A packet based "tshark mode" for detailed header and content inspection is improved for troubleshooting and security purposes. Flow based and packet based content inspection and extraction, better reporting, geo and organisation labeling, forensics support and encapsulation support such as ethip, teredo, anything in anything, SCTP, etc are new features of the 0.8.14. Checkout the tutorials: https://www.tranalyzer.com/tutorials -
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Semantic Segmentation Editor
Web labeling tool for bitmap images and point clouds
A web-based labeling tool for creating AI training data sets (2D and 3D). The tool has been developed in the context of autonomous driving research. It supports images (.jpg or .png) and point clouds (.pcd). It is a Meteor app developed with React, Paper.js, and three.js. -
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MANTI.pl / muda.pl
muda.pl - MQ unified data assembler
-------- ATTENTION START: RENAMING muda.pl was renamed to MANTI.pl with v3.7, project development can be tracked on the MANTI project page on sourceforge.net. Old versions remain here for archival purposes. -------- ATTENTION END muda.pl is an evaluation script (written in Perl) without great dependencies. It congregates information from 4 different MaxQuant output files into a master file suitable explicitly for protein neo-termini analyses. The central anchor for the data... -
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TaxOnTree
A program for associating taxonomic information in a phylogenetic tree
...Input can be a Fasta formatted file to be used in a BLAST search or a list of sequences represented by their identifiers (UniProtAC or NCBI gi), if a cluster is already available. Also, a newick file produced with user software and specific settings can be used to proceed with the taxonomic labeling. TaxOnTree turns its user into an expert on taxonomy. TaxOnTree also corrects for the absence of some taxa in NCBI taxonomy. Command line program is easy to set up and can be coupled to several bioinformatics tools, producing a colored tree in PDF format. TaxOnTree is available as a web tool in http://biodados.icb.ufmg.br/taxontree for low demanding jobs. -
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MetaErg
Metagenome Annotation Pipeline
MetaErg is a stand-alone and fully automated metagenome and metaproteome annotation pipeline published at: https://www.frontiersin.org/articles/10.3389/fgene.2019.00999/full. If you are using this pipeline for your work, please cite: Dong X and Strous M (2019) An Integrated Pipeline for Annotation and Visualization of Metagenomic Contigs. Front. Genet. 10:999. doi: 10.3389/fgene.2019.00999 The instructions on configuring and running the MetaErg pipeline is available at GitHub... -
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groundcad
CAD 2D for Land Surveying and Civil
Operating System : Windows - Linux - Mac OS Drawing 2D Point Line Polygon Rectangle Circle Ellipse Text,Image with thickness,color,hatch... Drawing commands : rotation,scale,explode... Labeling Point Line Polygon Rectangle Circle (Name Code Comment XYZ Length Angle Area Radius ...) Area Calculation by points or by object. Import-Export module : Image bmp,jpg,png CSV TXT SVG DXF R12 SOKKIA SDR33 TOPCON FC4 GTS7 XML LANDXML LEICA GSI8 GSI16 -
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BioRec:Bird Census field data annotation
Recognizing biological data from a notebook.
This project helps to digitize field data for a certain Bird Census method. Namely, bird census based on personal inspection or small (~10 km^2) regions with recording birds' position and behaviour on paper. This project makes it easy to annotate such field data and to make this data available for statistical analysis. -
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The Camellia library is an open source and cross-platform image processing library, written in plain C. It includes a lot of speed-optimized imaging functions (filtering, morpho, labeling, motion detection, warping, color conversion, project/backproject)
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bnf2xml
simple BNF parser makes xml markup of matches
bnf2xml a simple BNF parser that takes text as input, searches according to a BNF query file, and outputs text marked up by the xml labels that show context. bnf2xml is as simple to use as any text binary ie, awk(1) grep(1). bnf2xml does not require C API because it outputs simple xml labeling. README is visible on file dl page. EXAMPLE: $ echo "hi" | bnf2xml patternfile <word><alph>h</alph><alph>i</alph></word> or <gas>hydrogen iodide</gas> patternfile says how to find needle in haystack and what to show, ie: <alph> ::= a | b | c | d ... <word> ::= <alph>+ bnf2xml is a top down recursive parser. ... -
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OpenFlux2 is an extended version of OpenFLUX (https://sourceforge.net/projects/openflux/) - the modern MATLAB-based modelling software for 13C flux analysis (MFA). The following features were implemented in OpenFLUX2, which were not present in original software: integrated support for calculation and analysis of parallel labeling experiments (PLE), extended statistical analysis of parameter estimation results, calculation of fluxes and measurements correlation, structural identifiability analysis and elements of experimental design.
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GroundCAD 0.2
CAD 2D for Land Surveying,Civil and more
Operating System : Windows - Linux - Mac OS Drawing CAD 2D Point Line Polygon Rectangle Circle Ellipse Texte Labeling Point Line Polygon Rectangle Circle (Name Code Comment XYZ Length Angle Area Radius ...) Area Calculation by points or by object. Import-Export module : Image bmp,jpg,png CSV TXT SVG DXF R12 SOKKIA SDR33 TOPCON FC4 GTS7 XML LANDXML LEICA GSI8 GSI16 -
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IQuant
A pipeline for quantitative proteomics based upon isobaric tags
IQuant is an automated pipeline for quantitative proteomics based upon isobaric tags. It integrates post-processing tool of protein identification and advanced statistical algorithms to process the MS/MS signals generated from the peptides labeled by isobaric tags for quantification. IQuant can run from a graphical user interface (GUI) as well as a command-line interface and work with both Windows and Linux system. This website contains the IQuant software, an example data labeled by... -
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PHN/LAB file format converter
Convert the format of speech label files
Research in speech processing requires labeling and segmentation of speech signals, i.e., label files. Two useful formats for label files are the CSLU format (.phn extension) and the HTK format (.lab extension). This program converts speech label files from any of these two formats to the other one. Do this: 1- Provide the source directory (directory where the original label files are). 2- Provide the destination directory (directory where the new label files will be placed). 3- Select the operation, either phn->lab or lab->phn. 4- Press the Process! ... -
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Pocket CRF is a modified version of CRF++, it maintains the simplicity of CRF++ and is able to use high order features. Pocket M3N is a simple Max Margin Markov Networks package for sequence labeling tasks.
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CRF++ is a simple, customizable, and open source implementation of Conditional Random Fields (CRFs) for segmenting/labeling sequential data. CRF++ is designed for generic purpose and will be applied to a variety of NLP tasks.
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The UI Nav Test Tool is a web based application for testing the usability of labeling and organization for navigation systems. The test tool presents tasks to a research participant and collects data as they interact with a proposed navigation system.
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FlexCRFs: A Flexible Conditional Random Fields Toolkit for Labeling and Segmenting Sequence Data (this includes a parallel implementation of CRFs called PCRFs to support training CRF models on massively parallel computer systems).
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Yabman is a tool for managing bibliographic references. Its key features are a quality user interface, a carefully designed data model, and sophisticated three-state hierarchical reference labeling. It is currently usable but in a pre-alpha stage.
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A Mass Spectrometer B and Y ion labeling software for proteomics researchers. Peptide sequences can be read from a library and b and y ions will be calculated and sequence can be manipulated by the user (chem. mod. or amino acid mod.)
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