Search Results for "gnu assembler 8086"
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Showing 39 open source projects for "gnu assembler 8086"
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QSMM
An adaptive state model development framework.
QSMM, a recursive acronym for "QSMM State Machine Model", is a framework for learning finite automatons that perform goal-directed interaction with entities which exhibit deterministic or stochastic behavior. The learning process can be carried out in real time together with the interaction process. A basic building block for supporting state models of finite automatons is adaptive probabilistic mapping, which for an argument from its domain returns more often results that maximize or... -
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GCBASIC is an open-source BASIC compiler for 8 bit Microchip PIC, Atmel AVR legacy, AVRDx and LGT microcontrollers. See https://ko-fi.com/post/The-Story-of-GCBASIC-Making-Microcontroller-Progr-D1D319SJ72 for story of GCBASIC. This is a continuous release project. The latest release is always available. This will give you the most complete development toolchain to create and program 8-bit PIC, AVR and LGT microcontrollers. We have added new capabilities that make GCBASIC the...
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GenSeed-HMM
Progressive assembly tool using DNA, protein or profile HMMs as seeds.
GenSeed-HMM is a program for seed-driven progressive DNA assembly. It differs from the previously published GenSeed in many aspects, but more pointedly by being able to use an HMM profile as seed. Basically, GenSeed-HMM performs three operations, repeatedly: - recruit reads by matching them to a seed - assemble the recruited reads (including previously assembled contigs) - generate new seeds (for the next round of progressive assembly) from the extremities of all generated... -
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Integrated Development Environment for some microcontrollers based on 8051(e.g. AT89S8253). Supported languages are Assembly and C. It has its own simulator, assembler, editor and many other tools. See the project web site for more details and the newest updates.
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MIRA V5 is available only on GitHub! The V4 version released here on SourceForge stay up as some automated release fetching packages rely on V4. MIRA - Sequence assembler and sequence mapping for whole genome shotgun and EST / RNASeq sequencing data. Can use Sanger, 454, Illumina and IonTorrent data. PacBio: CCS and error corrected data usable, uncorrected not yet.
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haikuVM
A Java VM for ARDUINO and other micros using the leJOS runtime.
HaikuVM has been started for hobbyists who develop applications for ARDUINO to open the world of JAVA and leJOS. Yes, you can program an ARDUINO with JAVA! HaikuVM is so small that it even runs on an atmega8 (and the ASURO robot). And yes, you can program an ASURO robot with JAVA! And since version 1.4.0 the RCX lego brick. -
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Meraculous-2D
Eukaryotic Genome Assembler
---------------------------------------- IMPORTANT: Meraculous-2D has been superseded by the HipMer assembler, available here: https://sourceforge.net/projects/hipmer/ ----------------------------------------- Meraculous-2D is a whole genome assembler for NGS reads (Illumina) that is capable of assembling large, diploid genomes with modest computational requirements. Features include: - Efficient k-mer counting and deBruijn graph traversal - Two modes of handling of diploid... -
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GNUSim8085 is a simulator and assembler for the Intel 8085 Microprocessor. For downloading latest release please head to the website - https://gnusim8085.github.io/ For source code - https://github.com/GNUSim8085/GNUSim8085
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Celera Assembler (CA) is a whole-genome shotgun (WGS) assembler for the reconstruction of genomic DNA sequence from WGS sequencing data.
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EV3Utils
LEGO EV3 Utilities and Assembler
EV3Utils are Communication and Assembler utilities written in JAVA for working with the LEGO Mindstorms EV3 from Linux. A command line interface is provided which can be used to up- or download projects as well as assemble new bytecode files. Communication with the brick is currently limited to USB-only, but other transports should be easy to add. The assembler supports all of the functionality of the one provided by LEGO, but uses a slightly different syntax and supports far more... -
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SPA
SPA: a short peptide assembler for metagenomic data
The metagenomic paradigm offers the opportunity to study protein families, and therefore the metabolic and functional potential, of the constituent microbes in a community. A nucleotide assembly-based strategy does not fare much better since metagenomic assemblies are typically very fragmented and also leave a large fraction of reads unassembled. We present a method for reconstructing complete protein sequences directly from NGS metagenomic data. Our framework is based on a novel Short... -
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SOAPdenovo-Trans
A de novo transcriptome assembler.
Latest Codes on GitHub: https://github.com/aquaskyline/SOAPdenovo-Trans SOAPdenovo-Trans is a de novo transcriptome assembler inherited from the SOAPdenovo2 framework, designed for assembling transcriptome with alternative splicing and different expression level. The assembler provides a more comprehensive way to construct the full-length transcript sets compare to SOAPdenovo2. -
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OpenSOC86
Open implementation of the x86 architecture
OpenSOC86 is an open implementation of the x86 architecture in Verilog. The current version only implements the 16-bit part (real mode). The processor is a pipelined architecture clocked at 100 MHz in a Cyclone II speed grade -6. Therefore it can be seen as similar to a 486 in real mode. Several peripherals are also implemented in a somewhat minimalistic way, but enough to be able to boot an IBM PCXT compatible bios and MSDOS 6.22. The current implementation is only proven to boot the... -
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PASHA: Parallelized Short Read Assembly
One of the fastest parallel short read assemblers for large genomes.
PASHA is a parallel short read assembler for large genomes using de Bruijn graphs. Taking advantage of both shared-memory multi-core CPUs and distributed-memory compute clusters, PASHA has demonstrated its potential to perform high-quality de-novo assembly of large genomes in reasonable time with modest computing resources. Our evaluation using three small real paired-end datasets shows that PASHA is able to produce better assemblies with comparable genome coverage and mis-assembly rates... -
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lilpM32 is a MIPS-like processor designed in Logisim, assembler program and documentation for them. Complete assembler and fully functional instruction set with I/O and subroutines features allow to write full-blown complicated programs.
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LabMonkey Embedded Automation Platform
Create networks of embedded devices for data logging/automation tasks.
LabMonkey is a collection of designs for embedded devices which can be networked together to provide a range of automation, data logging and signal processing functions. A key design objective is to use as little dedicated hardware as possible for communication between nodes in the network, and to be able to adapt the network topology in real-time so as to minimize the occurrence of collisions between packets. To achieve this, a protocol has been designed specifically for the task, and... -
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This is an attempt to write a CPU emulator in Trolltech QT 4.4. Basic Functionality: - 8 bit registers - Self-composed instructoin set (in progress) - Data and Assembler Editor / parser (not started) - Text and graphical input / output (not started
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Iterate function viewer for Windows and Linux. It has built in 14 different iterate {Mandelbrot) functions. Many possibilities for changing parameters, saving as bitmap or small file. windows-32. Linux 32 - 64bit. Low level written in assembler.
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The `Turing Machine Compiler Collection' (tmcc) contains a virtual machine which emulates a Turing Machine such as an assembler and a C-like compiler which assemble/compile the written code into the delta-notation.
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side4linux is a simple IDE intended for source code programming in C, G-code and AVR/ARM Assembler with an emphasis on developing manufacturing and embedded applications. It will be developed to include simulators, PCB software, compilers etc.
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VCAKE is a genetic sequence assembler capable of assembling millions of small nucleotide reads even in the presence of sequencing error. This software is currently geared towards de novo assembly of Illumina's Solexa Sequencing data.
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Simple 8085 assembler and disassembler for educational use. The 8085asm generates the map file and intel hex file. It support the directives EQU, ORG, DB, DS and END.
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The Distributed Genetic Programming Framework is a scalable Java genetic programming environment. It comes with an optional specialization for evolving assembler-syntax algorithms. The evolution can be performed in parallel in any computer network.
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JSim8086 is platform-independent Assembly Language Simulator of the Intel 8086 CPU. It was designed to be a learning tool (CAL) for first year Computing students who are learning Computer Systems Organisation and Assembly Programming.
