Showing 2 open source projects for "gift card algorithm"

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  • 1
    GSvit

    GSvit

    Fast FDTD solver with graphics card support

    Fast FDTD solver with graphics card support. Optimized for nanoscale optics - scanning near field optical microscopy, rough surface scattering and solar cells. Uses CUDA environment for graphics card operation.
    Downloads: 5 This Week
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  • 2
    Swift Sequence Alignment Program

    Swift Sequence Alignment Program

    GPU-based DNA sequence alignment program using Smith-Waterman

    Swift is a DNA sequence alignment program that produces gapped alignment using the Smith-Waterman algorithm. It takes in a query file (FASTA format) and a reference file (FASTA format) as input. It outputs the reference name, read name, gapped alignment, alignment score, alignment start and end positions, and alignment length. I gave a talk on Swift in the GPU Technology Conference 2012. The talk can be accessed at...
    Downloads: 0 This Week
    Last Update:
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