Search Results for "gnu/linux" - Page 82
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Showing 14867 open source projects for "gnu/linux"
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selectseq
Get specific sequences from a FASTA or FASTQ file.
A command-line utility to manipulate biological sequences from a FASTA or FASTQ file. It can, given a list of identifiers, get only a subset of the sequences (or their complement, i.e., sequences NOT in the list). Can also get sequence number N only. Compressed sequences files are supported if readable by zcat. -
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haikuVM
A Java VM for ARDUINO and other micros using the leJOS runtime.
HaikuVM has been started for hobbyists who develop applications for ARDUINO to open the world of JAVA and leJOS. Yes, you can program an ARDUINO with JAVA! HaikuVM is so small that it even runs on an atmega8 (and the ASURO robot). And yes, you can program an ASURO robot with JAVA! And since version 1.4.0 the RCX lego brick. -
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This is a Python-based efficient implementation of several semantic similarity measures. The target is to enable fast and easy calculation of similarity between proteins and genes using the Gene Ontology (GO).
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SIVIC is an open-source, standards-based software framework and application suite for processing and visualization of DICOM MR Spectroscopy data. Through the use of DICOM, SIVIC aims to facilitate the application of MRS in medical imaging studies.
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Alevin2
Tool for the evaluation of ALgorithms for Embedding VIrtual Networks
ALgorithms for Embedding VIrtual Networks Software to evaluate Virtual Network Embedding Algorithms. -
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Free_Balistic
Input physical measures, calculate and show ballistic curve chart.
This application is intended to give abilities of calculating physical measures and draw charts, related to the aspect of the movement of sphere - shaped projectiles, ejected to reach some range. With the help of FreeBalistic you can fast calculate such measures as: height of bullet after specified time, height for given range, max height of bullet, range after given time, range to get max height, range to the end of move, time to get given range, time to get max height, time to get end of... -
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Arabic Corpus
Text categorization, arabic language processing, language modeling
The Arabic Corpus {compiled by Dr. Mourad Abbas ( http://sites.google.com/site/mouradabbas9/corpora ) The corpus Khaleej-2004 contains 5690 documents. It is divided to 4 topics (categories). The corpus Watan-2004 contains 20291 documents organized in 6 topics (categories). Researchers who use these two corpora would mention the two main references: (1) For Watan-2004 corpus ---------------------- M. Abbas, K. Smaili, D. Berkani, (2011) Evaluation of Topic Identification Methods on... -
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panFMP is a generic framework suitable for harvested XML metadata that is searchable through Apache Lucene without any additional RDBMS. Fields can be defined by XPath allowing for full text queries on all types of fields including numerical ranges. The code was moved to Github: https://github.com/pangaea-data-publisher/panfmp
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C++ BigInt class
C++ BigInt class enables to work with arbitrary precision integers
C++ BigInt class that enables the user to work with arbitrary precision integers. Latest Version: 10.3 (2019-03-06) -
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Gerbv is an open source Gerber file (RS-274X only) viewer. Gerbv lets you load several files on top of each other, do measurements on the displayed image, etc. Besides viewing Gerbers, you may also view Excellon drill files as well as pick-place file
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Our idea is to deploy a society of computational agents that collaborate in order to achieve the shared goal of decrypting a chunk of ciphertext or recovering a password from an hash by means of a dictionary-based attack.
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concordia
Powerful search library, best suited for computer-aided translation
Concordia - Roman goddess of agreement. Concordance searcher - tool for translators who need their translations to "agree" with one standard. Concordia is a C++ library for fast text lookup in large corpora. It uses a RAM stored index, which takes up approximately 600MB of memory for a corpus of 2 million sentences. It is based on the idea of a suffix array, enhanced by the presence of other auxiliary data structures. The effects are stunning - Concordia is able to do simple substring... -
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AntibiogramJ
AntibiogramJ is a Java program for the reading of antibiogram-images
AntibiogramJ is a Java program for the identification, measurement and categorisation of inhibition zones in antibiogram images captured with any device that incorporates a camera (including digital cameras and mobile phones). Citing AntibiogramJ: A. Alonso, C. Domínguez, J. Heras, E. Mata, V. Pascual, C. Torres, and M. Zarazaga. AntibiogramJ: a Tool for Analysing Images from Disk Diffusion Tests. Computer Methods and Programs in Biomedicine 143:159-169. 2017. DOI:... -
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Gaol: NOT Just Another Interval Library Gaol is a C++ library for interval arithmetic. It is supposed to be a fast and easy to use/modify library for anyone interested in assessing interval arithmetic merits or using it on a regular basis. WARNING: starting October 2016, the new location for GAOL is http://frederic.goualard.net/#research-software. Sourceforge and the Sourceforge Subversion repository will no longer be used.
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The ChIP-Seq software provides methods for the analysis of ChIP-seq data and other types of mass genome annotation data. The most common analysis tasks include positional correlation analysis, peak detection, and genome partitioning into signal-rich and signal-depleted regions.
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Brains is a generic plataform to construct arbitrarily complex artificial neural networks, allowing for parallelizide computing, inter-machine communication, on-flight configuration and on-flight control.
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TreeGraph
Information Manager(split/analyze/compare/combine).
For Homepage, Blog, Family Tree, Database, C#|hjt|js|chm Editor. Convert hjt2xml, (c#)cs2xml, chm2xml, js2xml, xml2cs, xml2js, xml2hjt, cs2hjt, hjt2cs, cs2chm, hjt2chm. IE/Opera/Firefox/PocketPC supported. -
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RigolDso
Rigol (DS1052E) HMI
...You can show data and parameters about measures save them in CSV files or (in future) bitmap, pdf, ps. I don't wish to control the DSO but read, manipulate and save data. It is a java application but at this moment it work on linux only, but I think it should be easy get it working for M$W. It works but it is a beta version, your linux user has to be able to read and write on "/dev/usbtmc0" (see readme.txt" file). -
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Hammurabi Code
Astrophysical magnetic fields simulator
Hammurabi is a HEALPix-based tool for simulating observables such as polarized synchrotron and thermal dust emission from models of physical inputs such as magnetic fields, dust and electron distributions, etc. It is a modular C++ framework into which you can add your own models easily and then use it to perform the line-of-sight integration to compute the observables. See the wiki for installation and usage information. Please cite the original Waelkens et al. (2009) paper if you use... -
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NanoR
R package built to analyze and compare Nanopore data
NanoR is a package for the statistical language and environment R, tested on Unix, MacOSX and Windows, that allows user-friendly analysis and comparison of 1D MinION and GridION X5 sequencing data within acceptable time frames. -
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DiagramaBarra
Graphical interface to create and simulate OpenDSS projects
C# graphical interface for power distribution simulation. Based on OpenDSSDirect library. Project founded by UDESC to improve education and learning. -
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AnharmoniCAOS
Cagliari-Orsay model for anharmonic molecular spectra in 2nd order PT
Given dynamical coefficients and/or derivatives of the ionic potential with respect to normal (harmonic) vibrational modes, compute anharmonic energies and electric dipole-permitted transitions and intensities using nearly-degenerate perturbation theory (i.e. properly accounting for Fermi and Darling-Dennison resonances). -
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MaRC (Map Reprojections and Conversions) is a C++ library and program designed to produce map projections of bodies thay may be represented as oblate spheroids from digital images (e.g. FITS images) or computed values (e.g. incidence and emission angles).
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The DREAM Toolbox
The DREAM toolbox is a free open source acoustic field simulation tool
The DREAM (Discrete REpresentation Array Modelling) toolbox is a free open source toolbox, for both Matlab and Octave , for simulating acoustic fields radiated from common ultrasonic transducer types and arbitrarily complicated ultrasonic transducers arrays. The DREAM toolbox enables analysis of beam-steering, beam-focusing, and apodization for wideband (pulse) excitation both in near and far fields. The code in the svn repository # svn co...
