Showing 14874 open source projects for "engineering"

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  • 1
    A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin) for Unix, Linux, MacOSX and MS Windows.
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    Downloads: 88 This Week
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  • 2
    ScaffCC

    ScaffCC

    Compilation and optimization framework for the Scaffold language

    ScaffCC is a compiler and scheduler for the Scaffold programing language. It is written using the LLVM open-source infrastructure. It is for the purpose of writing and analyzing code for quantum computing applications. ScaffCC enables researchers to compile quantum applications written in Scaffold to a low-level quantum assembly format (QASM), apply error correction, and generate time and area metrics. It is written to be scalable up to problem sizes in which quantum algorithms outperform...
    Downloads: 0 This Week
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  • 3

    DMRG-MPO

    Density Matrix Renormalization Group to a general MPO

    Ground state and dynamics of a Matrix Product Operator
    Downloads: 0 This Week
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  • 4
    Autshumato MTWS

    Autshumato MTWS

    Autshumato Machine Translation Web Service

    Web service providing access to the Autshumato Machine Translation (MT) and other Moses Statistical MT systems. Functionality includes: - Automatic sentence, document, web page translation. - Improvements for translations. - Reviewer requests and interface to review improvements - Connection to the latest version of the Autshumato ITE, Post Edits done on inserted automatic translations are automatically submitted to the MTWS. - Administration interface to add users, reviewers and MT...
    Downloads: 0 This Week
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  • 5
    Python4Proteomics Course

    Python4Proteomics Course

    Python course for Proteomics analysis

    Python course (in Spanish) for Proteomics analysis using basically Jupyter NoteBooks. For more information, you can have a look at the readme.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/p4p/code/ci/default/tree/readme.md
    Downloads: 0 This Week
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  • 6
    NOVA

    NOVA

    Analysis and visualization of complexome profiling data.

    NOVA is a program designed to analysis complexome profiling data (Heide et al., 2012). A graphical user interface (GUI) provides various visualization tools, such as heat maps and 2D plots. Several hierarchical clustering algorithms (e.g., single linkage, average linkage, Wards linkage), different distance measures (e.g., Euclidean distance, Manhattan distance, Pearson distance), and various normalization techniques are implemented. Many additional functions like zooming, searching for...
    Downloads: 5 This Week
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  • 7
    openSUSE Education - discontinued

    openSUSE Education - discontinued

    Li-f-e: Linux for Education

    For the latest releases see: https://sourceforge.net/projects/cyberorg-home/files/Li-f-e/
    Downloads: 3 This Week
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  • 8

    FastaTools

    Performs several operations to Fasta protein databases

    FastaTools performs several operations to Fasta protein databases. For more information, you can have a look at the README.md file in the source code tree: https://sourceforge.net/p/lp-csic-uab/fastatools/code/ci/default/tree/README.md Or you can download the Documentation an Tutorial PDF file in the Files section: https://sourceforge.net/projects/fastatools.lp-csic-uab.p/files/FastaTools%20Documentation%20and%20Tutorials.pdf - Gallardo, Ó., Ovelleiro, D., Gay, M., Carrascal, M.,...
    Downloads: 0 This Week
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  • 9

    Time Ephemerides

    Calculate time ephemerides in convenient form

    Project to calculate and distribute the general relativistic corrections to clock rates for the surfaces of various solar system bodies. These corrections are also known as time ephemerides.
    Downloads: 0 This Week
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  • 10

    AstroPictureSimulator

    Simulate sensor output of astro pictures taken by telescope

    This project aims at visualizing what a picture of a star will look like, depending on telescope, seeing conditions, settings of your astro camera etc. It simulates taking exposures of stars over a range of magnitudes and stacks them.
    Downloads: 0 This Week
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  • 11
    Directional drilling Calculator
    Computes the true vertical depth, horizontal deviation at the end of build, total measured depth and the various angles and radius given the kick-off point, build-up rate and other required data
    Downloads: 1 This Week
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  • 12
    This project is moved to github: https://github.com/sokirko74/aot
    Downloads: 0 This Week
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  • 13
    Crystalsim -  XRD hkl simulation

    Crystalsim - XRD hkl simulation

    X-ray diffraction (XRD) analysis for hkl simulation of any crystal.

    Crystalsim is a simple freeware program with a neat graphical user interface for X-ray diffraction (XRD) data analysis . It can simulates all possible {hkl} planes data for the selected crystal. Crystallographic Information File (.cif) can also be used. Analyze both powder diffraction and single crystal data . Indexed at International Union of Crystallography (IUCR). Crystalline lattice parameters such as ‘a’, ‘b’, ‘c’ as well as interfacial angles such as alpha, beta,...
    Downloads: 4 This Week
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  • 14
    Small Qt/Qwt program to display an analemma diagram of the sun. This is the curve representing the sun's angular height above the horizon. The program shows one curve per full hour (the real analemma) and one for every first day of a month.
    Downloads: 0 This Week
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  • 15
    Cppfunct implements run-time C++ function objects, with creation, invocation, manipulation, and combination. The function object concept abstracts ways to parameterise other classes beyond simple static values.
    Downloads: 0 This Week
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  • 16
    Jack LIRE (Linked Record)

    Jack LIRE (Linked Record)

    Quantum universal object system with referencing and genetics

    Jack LIRE (Linked Record) is a quantum database-backed life-long text record diary with referencing (linking) between records, and a data library for life-long keeping of files such as documents, photographs, music and more. The diary records are fully searchable. Files can be mentioned in diary records to preserve memories, document knowledge and ideas, and more. Massive numbers of diary records and files can be permanently kept. A database located on one computer can be accessed from...
    Downloads: 0 This Week
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  • 17
    LymPHOS2

    LymPHOS2

    LymPHOS2 Web-App

    LymPHOS2 is a web-based Application at www.LymPHOS.org containing peptidic and protein sequences and spectrometric information on the PhosphoProteome of human T-Lymphocytes. - Nguyen, TD., Vidal-Cortes, O., Gallardo, Ó., Abian, J., Carrascal, M., LymPHOS 2.0: an update of a phosphosite database of primary human T cells. Database 2015, 2015. DOI: 10.1093/database/bav115 - Carrascal, M., Ovelleiro, D., Casas, V., Gay, M., Abian, J., Phosphorylation analysis of primary human T lymphocytes...
    Downloads: 0 This Week
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  • 18

    MaxBin

    An automatic tool for binning metagenomics sequences

    MaxBin is a software for binning assembled metagenomic sequences based on an Expectation-Maximization algorithm. Users could understand the underlying bins (genomes) of the microbes in their metagenomes by simply providing assembled metagenomic sequences and the reads coverage information or sequencing reads. For users' convenience MaxBin will report genome-related statistics, including estimated completeness, GC content and genome size in the binning summary page. Users could use MEGAN or...
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    Downloads: 7 This Week
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  • 19
    HyLiTE

    HyLiTE

    Hybrid Lineage Transcriptome Explorer

    HyLiTE (Hybrid Lineage Transcriptome Explorer) analyzes high-throughput transcriptome data from allopolyploid species. Allopolyploidy describes the formation of a new hybrid organism from the union of two or more different parents. Allopolyploid species carry multiple copies of each gene (homeologs), which often exhibit unusual expression patterns. Homeolog expression levels can technically be determined from next generation sequencing data (RNA-seq), but in practice, assigning reads to...
    Downloads: 0 This Week
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  • 20
    silico

    silico

    Libraries and scripts for molecular modelling written in Perl

    A perl molecular toolkit designed to assist in general molecular modelling activities. Silico provides file format conversion, molecular manipulation and analysis and a simple way to write wrapper scripts around other preexisting software packages.
    Downloads: 0 This Week
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  • 21
    BioModels Database is a data resource that allows biologists to store, search and retrieve published mathematical models of biological interests. Models presented are annotated and linked to relevant data resources and are available in various format
    Downloads: 0 This Week
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  • 22
    ZanyBlue
    ZanyBlue: Ada libraries towards a finite element framework
    Downloads: 0 This Week
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  • 23
    Tux Math Scrabble

    Tux Math Scrabble

    12÷16×3=9÷4

    Latest version 0.9.1 runs on Python3. Date: June 15, 2023 Online/touch-screen version: https://www.asymptopia.com/tuxmathscrabble Encourages kids to construct compound equations and consider multiple abstract possibilities.
    Downloads: 2 This Week
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  • 24
    Java Neural Network Framework Neuroph
    Neuroph is lightweight Java Neural Network Framework which can be used to develop common neural network architectures. Small number of basic classes which correspond to basic NN concepts, and GUI editor makes it easy to learn and use.
    Downloads: 23 This Week
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  • 25

    distlink

    Library to compute distance between elliptic orbits (MOID)

    This C++ library allows to compute the Minimal Orbital Intersection Distance (MOID) between two elliptic confocal orbits using the method by Kholshevnikov & Vassiliev (1999), Cel. Mech. Dyn. Astr., 75, 75. The implementation of the method is described in (Baluev & Mikryukov 2019), Astronomy & Computing, 27, 11. It employs numeric error control and deals carefully with nearly degenerate cases (like almost circular and almost coplanar orbits). Library also includes auxiliary...
    Downloads: 0 This Week
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