Search Results for "java profiler windows" - Page 52
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Showing 4115 open source projects for "java profiler windows"
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BioGenie
BioGenie is presented as a complete package for Biological solutions.
Bioinformatics as an emerging research area spreads out many challenges to both the Bioinformaticists and the Bioinformaticians. BioGenie is presented as a complete package for tackling these challenges. Accommodating all three platforms, that is, a desktop application, a web application and a mobile (android-based) application, BioGenie outperforms all existing softwares engineered to assist heavy and complex computations. The GUI is very well-designed guiding the user technically with ease. -
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Ferox
Ferox - Sequence Alignment with Fuzzy K-mers
Ferox is a DNA sequence alignment application that uses fuzzy k-mers to quickly and accurately align sets of sequence reads against a reference genome. Ferox can also be used to align whole genomes. The seeding mechanism used by Ferox is highly configurable, allowing custom fuzzy seeds to be created declaratively in an XML configuration file. -
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An open source common API tasks to query existing ontology resources in local files (OWL and OBO) as well as public repositories (Bioportal, OLS) using a standardised, uniform interface.
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CySBGN
Cytoscape plug-in that enables handling SBGN maps
CySBGN adds support to Cytoscape to import, export, visualize and analyse System Biology Graphical Notation (SBGN) maps. -
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Seurat
A sequence analysis tool for normal/tumor DNA and RNA data.
THIS IS NO LONGER THE HOME FOR SEURAT. PLEASE GO TO https://sites.google.com/site/seuratsomatic/ --- Seurat is an sequence analysis program for somatic mutation and allelic imbalance discovery in paired tumor and normal genome and transcriptome data. -
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Open RVC-CAL to HDL (ORC2HDL) is an Eclipse Plugin which uses the Open RVC-CAL Compiler (ORCC) and the openForge HDL Synthesizer. This plugin gives the ability to generate HDL code from a RVC-CAL model.
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Tools for mass spectrometry, especially for protein mass spectrometry and proteomics: Quantification tools, converters for Applied Biosystems (Q Star and Q Trap), calculation of in-silico fragmentation spectra, converter for Mascot result files
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JGridMap
Java project for fast and easy visualisation of objects in a grid.
- Scroll/Zoom - Object dragging - ... -
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Decision Table Preprocessor
Ccide is a Decision Table preprocessor.
Ccide reads a source program, in one of several programming languages, expands all embedded decision tables, and generates the new, expanded source. Ccidew processes C language programs directly. The script, ccide, uses ccidew and m4, to process BASIC, JAVA, CC, C++, BASH, QB, VB, and EX(euphoria), source files containing embedded decision tables. Ccide checks all conditions once and only once, avoiding side effects. Ccide checks tables for conflicts and other... -
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JOSM plug-in for importing of map data from Cadastral portal of Slovak Republic. Vector data can used for corrections of Openstreetmap for Slovakia.
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Dutch sentiment analysis engine
Een module om de sentiment van een stuk Nederlandse tekst to bepalen
This application was developed by Incentro to satisfy requests by clients for a sentiment analyser for the Dutch language. It is currently in it's alpha stage and we expect to have a beta release by November 2012. If you would like to help with the development or testing of this product please contact us at +31[0]15 76 40 750 - of info {at} incentro.com. Deze applicatie is ontwikkeld door Incentro om te voldoen aan klantaanvragen voor een sentimentanalyse module voor de Nederlandse taal.... -
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Black Hole Cortex
Sphere surface layers of visual cortex approach maximum info density
Near the surface (even horizon) of a black hole, there is maximum information density in units of squared plancks (and some translation to qubits). Similarly, our imagination is the set of all possible things we can draw onto our most dense layer of visual cortex in electricity patterns. Bigger layers have more neurons to handle those possibilities. A Black Hole Cortex is a kind of visual cortex that has density of neuron layers similar to density at various radius from a black hole. What we... -
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OpenHIS - Modul Pendaftaran Pesakit Luar
Outpatient Registration Module
Outpatient Registration Module for OpenHIS Project -
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This project provides an interface to Java expression evaluator software. It does not itself provide expression capabilities but instead provides a common interface.
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The Research Geographic Information Kernel developed by Charles Ehlschlaeger and team. NOTE: Project code has moved to https://github.com/chuckre/DigitalPopulations Documentation is at http://digitalpopulations.pbworks.com/w/page/26034597/FrontPage
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Concierge OSGi is an OSGi (Open Service Gateway Initiative) R3 framework implementation optimized for resource-constrained devices like mobile and embedded systems.
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Olorin is an interactive filtering tool for next generation sequencing data coming from the study of large complex disease pedigrees.
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XNavigator - OpenStreetMap Globe
XNavigator is a Virtual Earth browser and viewer for http://osm-3d.org
XNavigator is the online viewer for the OpenStreetMap Globe at http://osm-3d.org and much more. It is an interactive 3D viewer and integrated client for exploring virtual city and landscape models. A wide range of interaction and navigation possibilities makes it easy to visualize and analyze very detailed virtual urban environments. XNavigator is the first application that supports the Web3DService (W3DS) service interface. -
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Convert GPS-Tracks to KML
Convert GPS-Tracks user-saved tracks to KML files for Google Earth.
...The GPS-Tracks iPhone application is available from the App Store or from http://www.gps-tracks.com . It can save recorded GPS tracks to the iPhone storage. This little Java applet provides the functionality to convert these saved tracks to KML files, for use with Google earth. Under Windows, it uses the synced files from the iTunes phone files backup, and extracts the tracks from there. Under Linux, it uses the virtual file system provided by libgpod (which provides an iPhone-gvfs-bridge) and gvfs-fuse (which offers gvfs virtual filesystems as Linux FUSE filesystems). ... -
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openBmap
a free and open map of wireless communicating objects
openBmap collects data and provides open maps and statistics of all communicating objects: cellular antennas, wifi hotspots. All softwares from back-end to client are open-source under AGPL v3 license. -
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Jnomics
Jnomics is a collection of cloud-scale DNA sequence analysis tools
Jnomics is a collection of cloud-scale DNA sequence analysis tools -
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MoonPlanner
Moon calendar: shows moon's phase, signs and relatives plant's part
MoonPlanner is a Java calendar that allow to view moon's phases, moon's signs (constellations in which the moon is), and show the part of the plant corresponding to each sign (flower, fruit, leaf or root). For every calendar's day the user can attach notes (that are stored in a persistent database). At the startup the program will remind you if there will be notes for current day. Timezones and localizations (En, IT) are supported by the application. This calendar is usable between 1900... -
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CUO
Codon Usage Optimizer
CUO is a GUI-based multiplatform software written in Java. It is open source and built with a user/developer-friendly structure. The main function of the software at the current development stage is to optimize genes to be transformed into the Chlamydomonas reinhardtii chloroplast genome although it can be used to optimize genes into other hosts as well. The main tool in CUO, Moptimizer, introduces a semi-automatic way of gene optimization which provides more flexibility and accuracy during... -
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TextComparer
Small Java program to compare two texts
Small Java program to compare two texts, originally designed to be used to find quotations in a Byzantine anthology. It can quite likely be used to detect plagiarism between two texts as well Graphical interface which allows easy navigation between corresponding parts in the two different texts. Uses the http://software.jessies.org/salma-hayek/ Java TextArea for this. Probably very much can be done to improve this program and the algorithm which it uses.
