Search Results for "command-line kill linux" - Page 52
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Showing 2578 open source projects for "command-line kill linux"
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FluxY
FluxY – a processing tool set for stable isotope label MS data
FluxY is a command line based high-throughput processing tool set for stable isotope labelled mass spectral data used for metabolic flux analysis. To get started simply download and unzip the FluxY.zip file and follow the getting started document in the Instructions folder. -
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tek
LaTeX Makefile Generator
tek generates a Makefile from a set of .tex files. It automatically converts images to the correct formats, pre-processes included files (for example, converts .gnuplot files into graphs), and handles latex options (such as bibtex). Gentoo .ebuilds are available. tek uses pconfigure to build https://sourceforge.net/projects/pconfigure/ -
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RMol : SD/Molfile information in R
RMol: Transforming SD/Molfile structure information into R Objects
RMol is an R script with a collection of functions to link information of SD/Molfile structure databases with powerful graph analysis packages in R. -
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PyPedal is a Python module that provides tools for the manipulation of pedigrees, simple visualization of pedigrees, and the calculation of measures of genetic diversity from pedigrees.
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This project is a collection of utilities to boot and flash various TI DaVinci and OMAP processors, including DSP-only, ARM-only, and ARM+DSP devices.
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CDNSimulator provides several libraries for ns2 simulator to extend it with content delivery networks (CDN).
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Phage_Finder is a heuristic computer program written in PERL that uses BLASTP data, HMM results, and tRNA/tmRNA information to find prophage regions in complete bacterial genome sequences.
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QDC (quick direct-method controlled) is an optimized exact implementation of the Gillespie's direct-method. It is designed for biochemical simulations when there is the need of dynamic parameters whose values can change during the simulation.
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SmithWaterman
Fast local sequence alignment for the masses!
MOVED TO GITHUB: https://github.com/noporpoise/seq-align An implementation of the Smith-Waterman local sequence alignment algorithm. See our sister project global alignment using Needleman-Wunsch: http://sourceforge.net/projects/needlemanwunsch/ -
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aeon-framework
AEON is an Evolutionary Computation framework written in C++.
AEON is an evolutionary framework written in C++, completely object-oriented. AEON is based on a plugin architecture to allow easy integration of new Evolutionary Algorithms (EA) and encodings, and to facilitate sharing of experiments among researchers. Experiments are developed and compiled separately with respect to the main framework. AEON can be easily configured using text files to use different encodings and/or EAs on the same experiment. The framework currently supports... -
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Development and support of OCFA have been discontinued. the code has moved to these github repositories: https://github.com/DNPA/OcfaLib https://github.com/DNPA/OcfaArch https://github.com/DNPA/OcfaJavaLib https://github.com/DNPA/OcfaModules https://github.com/DNPA/OcfaDoc If you are interested in contributing to ongoing work on the creation of a community maintained OCFA inspired computer forensic framework, please join the Mattock/MattockFS community page on...
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compeo++
compeo++ - Manage Flytec/ Bräuniger Instruments
compeo++ is a light-weight command line tool for GNU/ Linux to interact with flight instruments made by Bräuniger/ Flytec (5020, 5030, 6020, 6030, Competino, Compeo, Competino+, Compeo+). It comes as a portable C++ application with no dependency on any other program (except the GNU/ Linux platform libraries). It aims at being easy to install, easy to run and easy to use. -
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SOCS
SOCS is a SOLiD read mapper with bisulfite sequencing support.
SOCS performs ungapped alignment of SOLiD (color space) sequencing reads against reference sequences. Modes are available for detecting short sequence-space variants (such as SNPs) and for detecting unlimited numbers of bisulfite-induced nucleotide substitutions for 5mC methylation studies. -
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Dedalo
dedalo is a 2d cad drawing software written in python3.
dedalo is a 2d cad drawing software written in python3. It is licensed under the GPLv3. Dedalo features: layers, snaps (endpoint, intersection, midpoint), line, polyline, rectangle, delete, polygon, rectangle, arc, circle, points, text, spline, freehand drawing. Move, scale, rotate, offset, cut, extend, hatch, dimension, copy. English, italian languages SVG read-write. Not all features all fully supported. For more information a user manual is provided(pdf format, italian). -
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Software for making Clusters of Orthologous Groups (featuring the new EdgeSearch algorithm). Latest ref: Kristensen DM, Kannan L, Coleman MK, Wolf YI, Sorokin A, Koonin EV, Mushegian A. Bioinformatics 2010.
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wt210tocsv
Converts Yokogawa WT210 output to easily chartable CSV format
The Yokogawa WT210 outputs a CSV file through its GPIB-USB interface. The CSV is not easily chartable in Excel/Libreoffice. This will parse the CSV in a way that makes it more easily charted. -
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Fast Alignment Search Tool for di-base reads (color-space; AB SOLiD). A complementary program for the popular Illumina read mappers mrFAST and mrsFAST.
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CRFSharp
CRFSharp is a .NET(C#) implementation of Conditional Random Field
CRFSharp(aka CRF#) is a .NET(C#) implementation of Conditional Random Fields, an machine learning algorithm for learning from labeled sequences of examples. It is widely used in Natural Language Process (NLP) tasks, for example: word breaker, postagging, named entity recognized, query chunking and so on. CRF#'s mainly algorithm is the same as CRF++ written by Taku Kudo. It encodes model parameters by L-BFGS. Moreover, it has many significant improvement than CRF++, such as totally... -
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WordSegment
wordseg project is a word segment module implemented by C#
wordseg project is a word segment module implemented by C#. It is used to segment text into tokens and to label token's attribute according its context and semantic by front-maximum matching and CRF algorithms. The following are some sentences need to be segmented: 张晓晨和付仲恺一起坐在家（西坝河东里社区）里的沙发上看非诚勿扰。 百度公司的名字源于“众里寻他千百度”这诗句。 After above sentences be segmented by wordseg, the result as follows for each sentence: 张晓晨[PER] 和 付仲恺[PER] 一起 坐 在 家 （ 西坝河东里社区[LOC] ） 里 的 沙发[PDT] 上 看 非 诚 勿扰 。... -
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Powersim
Energy Estimation in SystemC.
Power/Energy simulation in SystemC. Powersim is a SystemC class library aimed to the calculation of power and energy consumption of hardware described at system level. To this end C++ operators are monitored and different energy models can be used for each data type. Powersim does not require any change in the application source code. Current version is 0.3.0. -
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Command-line tool to calculate error propagation. Generates the error formulas and applies them to the data.
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jaf_Utils
A C++ library for Statistical Language Processing tasks.
A C++ library for Statistical Language Processing tasks. -
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RNAseqR
RNA-seq expression analysis tool
RNAseqR is designed for expression analysis of RNA-seq data, and is best suited for analysis of multiple, unreplicated libraries. It is a C++ coded program currently compiled for Linux systems. With GUI and command line interfaces, it can do log, PPM, and/or RPKM (if lengths provided) transformations, as well as, statistical analysis for differential expression, using the negative binomial cumulative distribution function (CDF) or the R test statistic introduced for EST analysis by Stekel, et al. Output allows for decisions based on CDF probabilities, top R values, or comparison of R values with randomized data. ...