Showing 307 open source projects for "abc-map"

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  • Red Hat Enterprise Linux on Microsoft Azure Icon
    Red Hat Enterprise Linux on Microsoft Azure

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  • 1

    Protein Contact Matrix Generator

    Command line application to generate contact matrix from proteins (3D)

    A protein contact matrix is 2D representation of the distances between amino acid residues in a 3D protein structure. Protein Contact Map Generator (PCMGen) is a command line tool which takes protein 3D structures (PDB format files) as input and computes contact distances between two chains (from single or two different proteins). These matrix files can be further visualised as Contact Maps using other visualization tools/ programs (like R-heatmaps). Contact Maps can be used to understand...
    Downloads: 0 This Week
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  • 2
    Gene Studio is a free tool for modelling of DNA manipulation. It will allow to work with vectors, to design primers, to clone molecules and provide user friendly intewrface.
    Downloads: 16 This Week
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  • 3
    QuickNXS

    QuickNXS

    Polarized ToF reflectivity raw data analysis tool

    Data evaluation tool for the magnetism reflectometer at the spallation neutron source (BL-4A@SNS). Reads raw nexus files (HDF5) of histogrammed or event mode data to create reflectivity curves and 2D Q-maps.
    Downloads: 0 This Week
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  • 4
    Gen3D

    Gen3D

    A tool for 3D genome and chromosome structural model construction

    Gen3D is an application designed to determine three-dimensional genome and chromosome models. It uses chromosomal contact data to construct three-dimensional conformations. This method can generate three-dimensional chromosomal models satisfying a large portion of chromosomal contacts. The software is developed in Prof. Jianlin Cheng's Bioinformatics, Data Mining and Machine Learning Laboratory in the Computer Science Department at the University of Missouri - Columbia, USA. The project...
    Downloads: 1 This Week
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  • 5
    CPS Wildfire Management Tool

    CPS Wildfire Management Tool

    A wildfire decision support system and visualization tool from Emxsys.

    The Wildfire Management Tool (WMT) predicts the potential fire behavior of a wildland fire. WMT incorporates a 3D terrain viewer, the tenets of the Campbell Prediction System (CPS) and the Rothermel fire spread equations to depict fire behavior. WMT is used to adjust tactics & strategies to ensure the safety of firefighters and the effective use of firefighting resources. Requires Java 8 (included) - http://www.java.com/download
    Downloads: 4 This Week
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  • 6
    A mapping application written in Java that displays Ordnance Survey maps downloaded from OS's getamap website or maps from the OpenStreetMap project. It is possible to add new map sources or extra functionality through plugins.
    Downloads: 1 This Week
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  • 7
    QMapControl is a Qt widget which enables your applications to use map data from different sources on desktop or mobiles. Maps can be enriched by custom objects which will be drawn into the map.
    Downloads: 1 This Week
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  • 8
    PhyloTrack

    PhyloTrack

    PhyloTrack, D3.js and JBrowse for phylogeny and positioning of samples

    PhyloTrack is a JavaScript--based software tool that integrates the D3.js library for data visualization with the JBrowse tool for genome browser representation. It requires a phylogenetic tree of the common Newick data format as input, as well as three meta data files for samples, clade-defining nodes and clade color definitions - all in tab delimited format. Functionality within PhyloTrack shows the informative markers at each node in the phylogenetic tree, therefore highlighting...
    Downloads: 2 This Week
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  • 9

    GUItars

    GUItars is designed for the analysis of high throughput RNAi data.

    ... replicates as well as with replicates. For comparison purposes, non-SSMD-based methods such as percent activity, z-score, and t-test are also provided as scoring options. Version 2.1 released: several bugs fixed. Version 3.0 released for Windows and Mac: experiment-wise analysis option, map to all samples option (no hit cut-off needed), percent activity for replicates option and .ai output format are added
    Downloads: 0 This Week
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  • 10

    Safira Digitizer

    Free image and chart digitizer

    Safira Digitizer is free software built to help everybody on digitizing image (chart, map, etc.) to become number / numeric to be used for further calculations. Safira Digitizer is available for both Windows and Linux. For more information please go to www.firagiel.com
    Downloads: 0 This Week
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  • 11
    MDcons(Molecular Dynamics consensus)

    MDcons(Molecular Dynamics consensus)

    Interpretation of Biomolecular MD simulations

    MDcons is a tool to analyze conserved contacts during Molecular Dynamics (MD) simulations of Protein, Rna, Dna & Ligand based complexes. The input is either a Molecular Dynamics trajectory or a set of snapshots. The input can also be a single snapshot. The outputs are (1) map of most/less frequently conserved contacts during MD (2) a list of most/less frequently conserved contacts during MD.
    Downloads: 0 This Week
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  • 12
    MapFramer

    MapFramer

    Create cartographic map frames from an XML template

    mapframer is a commandline program that reads a map frame specification from an XML-file and outputs a map frame to a PDF-file.
    Downloads: 0 This Week
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  • 13
    IRK! Infrared Remote USB Keyboard

    IRK! Infrared Remote USB Keyboard

    Control your computer with an IR remote

    This is an open-hardware Infrared Remote Controlled USB keyboard, without keys, implemented using a PIC micro-controller and MikroC. IRK! enables you to use your LEARNING remote control to control any system that you can plug a USB keyboard into (Windows, Linux, Mac). Great for controlling a home theatre system such as MythTV, XBMC or Media Center. No drivers are required. You can program *any* USB keyboard function (with or without Control, Alt, Shift and GUI modifiers) to a button on...
    Downloads: 0 This Week
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  • 14

    ojmapcoloring

    Map Coloring Plugin for OpenJump

    This is a map coloring plugin intended for OpenJump. It uses the Five Color Theorem to color an OpenJump layer with five colors such that no two adjacent features have the same color.
    Downloads: 0 This Week
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  • 15
    trafalgar.map

    trafalgar.map

    Open Street Map (OSM) tools, OSM/XML parser, tag extractor

    This is going to be a set of tools which is intended to be used with huge OSM files like the planet files in XML format. The parser reads directly from packed *.gz files and it is not needed to unpack the OSM/XML data files to the local disk. Now in 0.3.0: osm_tags: tag analyzer (like tag watch) osm_split: split osm file in single files for nodes, ways and relations and collect some meta information (will be used as input for other tools). osm_cut: create rectangular...
    Downloads: 0 This Week
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  • 16

    phpBathymetry

    Using PHP-CLI to parse NMEA data to generate depth maps with GD

    Using PHP-CLI to parse NMEA data to generate depth maps with GD. As fishing is a passion of mine,and it got me to consider using the NMEA formatted data output from my Lowrance 5-DSI Elite to generate a bathymetric map of the lake at my cottage. It is currently very crude, just a bunch of CLI scripts that record NMEA data, and the other parses the stored data and builds a depth, water temperature and sample frequency map.
    Downloads: 0 This Week
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  • 17
    Mushrooms

    Mushrooms

    See you and your friends on a map

    (Former project name was Geo5.) It was never easier to share your position with friends. Just open http://jfellow.net/geo5/ and see you and your friends on a map. (http://jfellow.net/geo5/ is a test server. You can download and install your own server. It's open source.) - Build groups, all group members see each other automatically. - No registration, no installation, no spyware. - Advanced: Tracks, routing (planned). It's about privacy. Reclaim the internet from authorities...
    Downloads: 1 This Week
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  • 18
    SnowMicroPyn

    SnowMicroPyn

    Python based reader for SnowMicroPen® .pnt measurements

    SnowMicroPyn is an opensource reader for SnowMicroPen® files in binary .pnt format. The reader is Python based and published as source code as well as compiled executable for Windows, Linux and Mac. The software is preliminary, thus please report bugs. For further information, please read the Readme.txt in the download section. The SnowMicroPen® (SMP) is developed by the WSL Institute for Snow and Avalanche Research, Davos. The SMP is the first high-resolution snow penetrometer. It is...
    Downloads: 0 This Week
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  • 19

    Truncated power series algebra

    Truncated power series algebra

    This project consists of two object-oriented implementations of truncated power series (TPSA) for arbitrary order and number of variables. Addition, subtraction, multiplcation, division, and exponentiation are all implemented in the algebra as overloaded operators. They can also compute with maps, a map being an array of TPSA objects representing a mapping of a space into itself. They are implemented as arrays of TPSA objects equal in number to the number of variables of the algebra. One...
    Downloads: 0 This Week
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  • 20
    Gpsdrive is a car (bike, ship, plane) navigation system. Displaying your position on a map and a lot of other functions are implemented. It works with vector maps from http://www.OpenStreetMap.de/
    Downloads: 0 This Week
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  • 21
    GpsTicker2

    GpsTicker2

    GT2 combines online and offline navigation for hikers and cyclists

    The lightweight and compact App GpsTicker2 combines online and offline navigation for hikers and cyclists. Offline route calculation is possible for all federal states of Germany and many other regions. Online route calculation can be done at home with available internet connection, saved routes and pois can be used outdoor without mobile network. Maps can be easily downloaded with the integrated download manager. GpsTicker2 is free of advertisement (AdMob). Try the new version...
    Downloads: 0 This Week
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  • 22

    Quadriga

    Quadruple Network Management System

    ... repository, allowing users to select items stored in the repository for annotation. Quadriga can use standard graphs to map quadruples onto conventional semantic graphs that can be submitted to a triple store, and used for interactive websites and visualizations.
    Downloads: 0 This Week
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  • 23
    A Matlab toolbox for calibrating the Kinect Sensor. It provides functions to jointly calibrate the depth sensor with a color camera as well as to generate a depth map for the color image and reproject the points in metric coordinates.
    Downloads: 4 This Week
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  • 24
    wafimpa
    WAFIMPA is the abbreviation of "WArped FIsh-eye Mirror Projection Adjuster". This is small GUI application. It helps to setup spheric mirror projection systems that frequently used in small planetariums (generates warp-map and mplayer ppm files).
    Downloads: 0 This Week
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  • 25
    msBayes allows complex and flexible phylogeographic inference. More specifically, you can test the simultaneous divergence (TSD) of multiple population (species) pairs. It uses approximate Bayesian computation (ABC) under a hierarchical model.
    Downloads: 0 This Week
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