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MOLGENIS can be used to generate databases for life science experiments (micrroarray, mass spectrometry, genomics) having a web user interface, csv exchange format, and programmatic interfaces (web services, rest, and r-project). See NatRevGen 8.
MIMES is a suite of dynamic ecological economic computer models specifically aimed at integrating our understanding of ecosystem functioning, ecosystem services, and human well-being across a range of spatial scales.
ManFieLd is an easy-to-use framework to develop filtering applications for Distributed System, relieving the burden of the developer to write the support code for the filtering methods.
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Ouroborus is an artificial life framework for mobile agents on a background of cellular automata. It can be used to teach and research topics such as population genetics, ecology and evolution. The demo includes a curses view and live Csound audio.
jQuantum is a Java program to simulate a quantum computer, to design quantum circuits, and to visualize the execution of quantum algorithms. Another main purpose, however, is to create images in your head, and thereby - understanding.
SynBioLib -- your toolkit for synthetic biology applications. SynBioLib aims to establish a platform on which the Synthetic Biology community can develop and share code that is common to many tasks and programs.
A high-performance and ease-of-use implementation of the Modbus protocol written in Java by Infinite Automation Systems Inc.. Supports ASCII, RTU, TCP, and UDP transports as slave or master, automatic request partitioning and response data type parsing.
For commercial licenses see www.InfiniteAutomation.com
Get the most recent code here: https://github.com/infiniteautomation/modbus4j
For support: http://infiniteautomation.com/forum/category/11/modbus4j-general-discussion
*** There is now an active effort to include a QT-only (no KDE) based IDE for Octave that is part of the main Octave sourcecode. I recommend that you build and test that version of an IDE, as it will be the most supported option going forward. ***
The octavede is a development environment for the Octave mathematical software package. Octave normally is run in a terminal. Octavede provides an GTK/X11 application that provides functionality similar to other mathematical software packages.
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IBIS - Interactive Biodiversity Informatics Software - is software to identify species or other taxa. Intended users range from school children or citizen scientists to ecologists or taxonomists. The identification keys can be embedded in CMS or Wiki
The Blue Obelisk is a group of scientists driven by a belief in Open Source, Open Standards and Open Data, expressed in code, data, algorithms, specifications, tutorials, demonstrations, articles and anything that helps get the message across.
GEZEL is a cycle-based hardware description language. The GEZEL tools offer stand-alone - and cosimulation, and code-generation into VHDL code. User-defined library-block extensions in C++ allow to add new cosimulation/cosynthesis interfaces.
C++ template headers for linear algebra manipulations. These are designed for ease of use in writing human readable code. Follows a similar syntax to MATLAB.
An open source interactive computer program for Continuum Mechanics, Image analysis, Signal processing and System Identification. Target usage: Bioengineering application of finite element analysis, boundary element and collocation techniques.
aLice - ALice is likely the most Inefficient Code Ever written for boundary elements It is a c++ multi-platform code (tested on MAC-OS X 10.5, Win32, Ubuntu linux 9.04) for BEM analysis of steady and time dependent problems (in progress)
Sandia National Laboratories’ (SNL) environmental assessment modeling tool helps optimize the design of MHK-turbine array layouts within ocean, tidal, and river systems to balance energy generation efficiency with environmental considerations. The new tool, SNL-EFDC, is an augmented version of US EPA’s Environmental Fluid Dynamics Code (EFDC) and includes; (1) a new module that simulates energy conversion (momentum withdrawal) by MHK turbine-like devices including commensurate changes in the...
An Interactive Fiction Player written for Java Virtual Machine. It implements the Z-machine and Glulx specifications and can be used either standalone or as an applet. The Z-Code/Glulx interpreter runs adventures made by Infocom and contemporary Inte
The openLBMflow is an fast fluid flow solver based on Lattice Boltzmann Method. Main future are 2D and 3D code, single and multiphase models, Output data in VTK format can be directly open in Paraview. Download Windows or Linux binary version now.
With the "xix" library, GATE functionality is available in XQuery (via an MXQuery extension). OpenCalais invocation is supported, too. -- Sourcecode at http://sgv-jenkins-01.ethz.ch/job/xixlib/ws/-- "Show project details" for instruction
1. Create an object-oriented python script that can represent mathematical concepts and their properties. 2. Represent all numeric values exactly. 3. Provide a variety of formats to export or embed representations of the mathematical concepts.
ACRASH is an open implementation of the CRASH Monte-Carlo continuum radiative transfer scheme presented in Ciardi et al. 2001 and Maselli et al. 2003. This code solves the radiative transfer equation for any geometry in 3D using a Monte-Carlo scheme.
This project will be a Java Application for the Parallax Microntrollers, It will eventualy implement Code Snippets, and javadocs when completed. If you are experianced and interested in Java, please help this project.
OSGB Web Map Tools is a set of software code and installation instructions that will enable web developers to produce dynamic mapping web sites using Ordnance Survey map data on the internet.