Showing 1604 open source projects for "linux file parser"

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  • 1
    It is a software to program ISP based 8051 controllers(89SXX) on Linux. The software decodes the hex file entered from the command line and send it to controller's flash memory using PC's parallel port.The hardware connections are very minimal.
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  • 2
    E.N.M.L. means Environmental Noise Model Language. The target of the project is the definition of a XML specification model mainly devoted to electronic acoustic data exchange. ENML aims to format ANY kind of noise measurement.
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  • 3
    Unsupervised TXT classifier

    Unsupervised TXT classifier

    Classify any two TXT documents, no training required - JAVA

    This program is made to address two most common issues with the known classifying algorithms. First, over-training and second, shortage of data for a training of categories. Instead, each TXT file is a category on its own, rather than an assigned category. In a way, this is similar to clustering but not really a clustering algorithm since there is some training involved. The summarizer from Classifier4J has been adjusted to accept two inputs (lets call them A and B). Then, the summarizer...
    Downloads: 0 This Week
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  • 4
    Census2
    Census is a comprehensive cross-platform project manager and integration hub for NONMEM, the gold standard tool for model-based pharmacometric data analysis.
    Downloads: 0 This Week
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  • 5
    Easy Equations

    Easy Equations

    Hand Written Equation Creator

    Easy Equations is a utility using which one can write the mathematical equations. The focus of this utility is to provide user friendly access to write mathematical equations which is helpful for students, lecturers, mathematicians and Research persons who prefer using mathematical equations in a document, PowerPoint or web sites. Works on Windows as well as Linux platforms. Software Requirements: JDK 7 or higher. Linux Platform with kernel version 2.7 or higher.(for Linux users).python...
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  • 6
    Nuclei

    Nuclei

    Feature rich GUI for nuclear decay schemes

    Nuclei is a software tool for the displaying of nuclear decay schemes and estimated energy spectra, the calculation of angular γ emission anisotropies, and the automated search for appropriate decay cascade properties. It uses the Evaluated Nuclear Structure Data Files (ENSDF). A description of Nuclei's functionality and results obtained using its search method was published in Nuclear Instruments and Methods in Physics Research, Section A: M. Nagl, et al., NIM A 726 (2013),...
    Downloads: 2 This Week
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  • 7
    openDICOM.NET - DICOM library, console tools, DICOM viewer/browser for Mono/.NET and Beagle Desktop Search Plugin. The project supports ACR-NEMA and DICOM file formats and provides transcoding to XML. It is written in C# and licensed under (L)GPL.
    Downloads: 1 This Week
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  • 8

    OrthoRBH

    Rapidly identify orthologous cDNA sequences in related species

    OrthoRBH is a tool/pipeline designed to identify families of protein coding transcripts/genes in related species using a reciprocal blast method. It can search through databases of full-length cDNAs, ESTs or mRNA-seq data. Optional assembly of candidate sequences allows assembly of contigs. It is suited to handling a mixture of EST and mRNA-seq sequence data. It performs batch blast searches, so it is ideal for large multi-gene families. After collecting candidate sequences, it performs...
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  • 9

    GeekCode

    Python script for GC

    GeekCode Generator. Object - oriented python script, which allows You to generate GeekCode Block from natural english language symbols. All instructions are in program. Enjoy and please report bugs or anything else for improve this script. This is my first full object-oriented program.
    Downloads: 0 This Week
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  • 10
    TF-IDF.jar is a Java Archive file to measure TF-IDF of each document in a document collection (corpus). The jar can be used to (a) get all the terms in the corpus (b) get the document frequency (DF) and inverse document frequency (IDF) of all the terms in the corpus (c) get the TF-IDF of each document in the corpus (d) get each term with their frequency (no. of presence), term frequency (TF) and TF-IDF in every document
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  • 11
    next generation sequencing workflows
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  • 12

    c4nhanes

    command line tools for processing tab delimitted statistics

    The national health and nutrition examination survey (NHANES) is done by the center for national health statistics. Data is made available for public use by this group for research; however, it is in a format that is not universible accessible. This provides the data in a simple format as well as a set of tools to manipulate the data. It can interface with open office and libreoffice using their csv filter.
    Downloads: 0 This Week
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  • 13
    Askbot for php

    Askbot for php

    An open-source Question and Answer plattform software

    An open-source Question and Answer plattform software, written in php, mysql. Based on the original Project by askbot.org
    Downloads: 0 This Week
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  • 14
    AJT is a set of utility classes for Java for handling some bioinformatics data, graphics file export, GUI widgets, and classes that should long have been added to the official Java API.
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  • 15
    Plinko was originally an experiment with Prefix Trees and log parsing. The general concept is to have a single end point you can send any data to, in a "fire and forget" fashion. Plinko should identify and parse the data completely without the sending system caring what it sent. The latest version supports named fields in the STL files for tagging data parsed in the Prefix Tree and anonymous functions for parsing dynamic message payloads. We now output JSON objects and I'm working on HBase...
    Downloads: 0 This Week
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  • 16

    Introminer

    Extracts intronic information from annotated genomic sequence

    Created by Julie Shay and Claudio Slamovits. Introminer reads a sequence file with genomic data that contains sequence and intron positions in genbank format. It extracts positional and sequence data as well as the intronic sequences and other important parameters to study gene architecture and intron evolution at a genome-wide scale.
    Downloads: 0 This Week
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  • 17

    gcr_convert

    converts cosmic-ray files from GALPROP for viewing / plotting.

    The GALPROP program (http://galprop.stanford.edu) computes cosmic-ray propagation in the Galaxy, in 2D or 3D. The ouput cosmic-ray distribution is in the form of FITS files which however are not convenient for viewing or plotting with the standard ftools program fv, since the files have 4 or 5 dimensional arrays (due to the momentum and species axes) while fv handles only 3 dimensional arrays. This program converts to fv-compatible FITS files, either from 2D to (R,z) or from 3D to (x,z) at...
    Downloads: 0 This Week
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  • 18
    Gebabbel

    Gebabbel

    A frontend for gpsbabel

    Gebabbel is a GUI for the famous gpsbabel, a command line tool to convert various GPS file formats back and forth. Thanks to gpsbabel, you cannot only convert files but also exchange data with your GPS device (e.g. Garmin and Magellan) directly.
    Downloads: 0 This Week
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  • 19

    Systems Glycobiology

    Glycosylation Network Analysis Toolbox (GNAT)

    GNAT is an open source, platform-independent MATLAB based toolbox. It is written in MATLAB and Java. It has been tested in Windows (Windows 7), Linux (Ubuntu), and Mac OS (X Lion) platforms. The original GNAT package (file GNAT.zip) provides functions for reading, writing, manipulation, visualization and simulation of glycan structures and glycosylation reaction networks (citation [1]). The second version of this software (GNATv2beta.zip) upgrades the original GNAT program with additional features that are geared towards incorporating glycan-structure experimental data into the simulation environment. ...
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  • 20

    tagfs

    Tag based file manager CLI

    A Tag based file management system. Command line interface. User can add tags for files (individually or for the folder). Allows search by tags.
    Downloads: 0 This Week
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  • 21

    MSTParser

    MSTParser is a non-projective dependency parser that searches for maxi

    MSTParser is a non-projective dependency parser that searches for maximum spanning trees over directed graphs. Models of dependency structure are based on large-margin discriminative training methods. Projective parsing is also supported. mstparser 0.5.1 is now available via Maven Central. If you use Maven as your build tool, then you can add it as a dependency in your pom.xml file: <dependency> <groupId>net.sourceforge.mstparser</groupId> <artifactId>mstparser</artifactId> <version>0.5.1</version> </dependency>
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  • 22

    ORIPA S

    A drawer for origami crease pattern

    ORIPA S is a drawing tool specifically designed for a origami crease pattern. It is derived from ORIPA which is developed by MITANI Jun. New features by ORIPA S are: - save current crease pattern as a image file (jpeg, png) not only original project file. - while pasting, select a point on pattern to be matched against destination point. - Some considerable bugs are fixed (i.e., wrong undo behavior on ORIPA v0.35). This program is free software: you can redistribute it and/or...
    Downloads: 3 This Week
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  • 23

    SunlightDPD

    Open source codes related to dissipative particle dynamics

    SunlightDPD provides a home for open source codes related to the dissipative particle dynamics (DPD) simulation method. Currently the file release contains the HNC integral equation code.
    Downloads: 0 This Week
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  • 24
    Specview is a Java GUI_based application for 1-D spectral visualization and analysis of astronomical spectrograms generated by a variety of observatories and instruments. Note that we no longer provide file distributions of this software. You are encouraged to visit the specview web site download page: http://www.stsci.edu/institute/software_hardware/specview/download to retrieve an installer appropriate for your platform.
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  • 25
    Hy3S uses advanced MPI parallelized hybrid stochastic simulation methods to quickly compute the dynamics of biochemical networks with thousands of species/reactions. Many features included (see Home Page). An easy-to-use GUI (Matlab req) is included.
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