Search Results for "linux file parser" - Page 18
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Showing 1604 open source projects for "linux file parser"
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Kinannote
Protein Kinase Identification and Classification
Kinannote identifies and classifies protein kinases in a user-provided fasta file using an HMM derived from serine/threonine protein kinases, a position specific scoring matrix derived from the HMM, and comparison with a local version of the curated kinase database from kinase.com. If the user inputs a complete proteome, additional modules evaluate the completeness of the kinome and place it in context with reference kinomes. Kinannote runs on a unix command line and depends on local hmmer 2... -
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stellarics
Inverse Compton emission from heliospheres of sun and stars
Cosmic ray electrons scatter on the photon fields around stars, including the sun, to create gamma rays by the inverse Compton effect. This program computes the spectrum and angular distribution of this emission. The software also includes general-purpose routines for inverse Compton scattering on a given electron spectrum, for example for interstellar or astrophysical source modelling. For further information see these publications: http://arxiv.org/abs/astro-ph/0607563,... -
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SoundRuler is a tool for acoustic analysis, graphing and teaching. It interactively recognizes and measures 35 temporal and spectral properties of each sound in a file. It also features several measurement, graphing and didactic modules.
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BelgradeGlory
Printable .stl file of the Belgrade Glory gun 2016
.stl file download for 3D printing Go artgun.me for more info -
Enterprise-grade ITSM, for every businessFreshservice is an intuitive, AI-powered platform that helps IT, operations, and business teams deliver exceptional service without the usual complexity. Automate repetitive tasks, resolve issues faster, and provide seamless support across the organization. From managing incidents and assets to driving smarter decisions, Freshservice makes it easy to stay efficient and scale with confidence.
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Burris Numerical System
A Numerical System controlled by algorithms.
BNS - Burris Numerical System was written to store the last digit of a number in 3 dimensional space but store the rest of the number mathematically in the 4th dimension of space. The result is that no matter how long the number is you can write it down on a piece of paper and put it in your pocket. The software can be used to retrieve the number. This can be used to save computer files. The only limit with BNS is how much time the user has. The software nor the numerical system has no... -
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Project 2306 IDE Rad MacOS MCU DeveR
Electronic design and programming tools suite like Eagle, MpLab
Currently Only MacOS is Present, PreAlpha means not Ready to use, Application is provided Without Strict Garantee, License not OSI. All others platform Windows, Linux, HaikuOS STILL under TEST, Dummy "Hello world" is provided instead Project2306 IDE : Application pour la programmation de Microcontroleurs et d' Application Electronique Project2306 IDE : for All whom want to Create and Develop on Embed Platform Software as Programming Tools suite and PCB Design Planned... -
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ISVASE
identification of sequence variant associated with splicing event
To generate correct mature mRNAs, the exons must be identified and joined together precisely and efficiently by RNA splicing mechanism. It is to be noted that about one third or a half of all disease-causing mutations effect RNA splicing. However, there is little bioinformatics tools to directly identify sequence variants associated with splicing events (SVASE) based on RNA-seq data. We developed ISVASE, a simple and convenient tool for identifying SVASE directly using RNA-seq data.... -
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The Maltcms - Modular Application Toolkit for Chromatography Mass-Spectrometry is a JAVA API for preprocessing, alignment, analysis and visualization of data stored in open file formats used in Proteomics and Metabolomics research.
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freehealth
Free and open source Electronic Health Record
What is FreeHealth EHR? A free and open source electronic health record Who can benefit from FreeHealth EHR? healthcare centers hospitals clinics medical doctors nurses physiotherapists allied health professionals FreeHealth EHR is coded in C++ / Qt5. Supported OS: * GNU/Linux: Debian, Ubuntu * Mac OS: 10.9 Mavericks (64 bit), 10.10 Yosemite, 10.11 El Capitan * Windows: Windows 7 (32 bit & 64 bit), Windows 8, Windows... -
Build Agents and Models on One PlatformGemini Enterprise Agent Platform is Google Cloud's comprehensive platform for developers to build, scale, govern, and optimize agents and models. Choose from Google's most advanced models and third-party models like Anthropic's Claude Model Family.
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Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, biochemistry, or related areas
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Priority Estimation Tool (AHP)
PriEsT is a decision making tool for Analytic Hierarchy Process (AHP).
Priorty Estimation Tool (PriEsT) is a decision analysis tool. You can use it for ranking the options you have, or alternatively, you may use it for resource allocation (budgeting) problems. In PriEsT, you enter a list of available options and then define your criteria for prioritization. After defining criteria, PriEsT allows you to enter your judgements against each criterion, which are then used to calculate the final ranking (or weights). Please cite this if you find it... -
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yb Medical Dictionary User Customizable
java8 based yb (creator's name) medical mini dictionary with text file
As a medical blogger, I felt that there is a need for platform-independent medical dictionary. Hence 'java 8'. The dictionary must be customizable ie. user should be able to add, delete words. Hence, the use of text file for medical data, instead of xml or some database or sql or some hard-to-understand things. Java 8 can be invoked even from usb pen drives. We have used only one .java file which contains the main class. Compiling it yielded only two classes. Thus simplicity is... -
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MITP
MITP - conserve & novel miRNA identification & target prediction tool
miRNA is a widely known small non-coding RNA which can mediate gene regulation of most important biological processes in plants and animals. Therefore, identification conserve and novel miRNA and their target genes in model and new sequenced species are inevitable. MITP is designed to identify miRNA easily and faster based on sequence mapping result from any mapping software which producing SAM format output result, blast result (default output result) or blat result (default output result).... -
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PB-sQF_BacterialTyping
Bacterial Typing from either assembled or raw short reads file
Probability Binning - signature Quadratic Form, PB-sQF, types unknown sequence to one of the 628 bacterial library genomes which gives the smallest test statistics thus most similar library strain. The input file is the k-mer counts of the unknown assembled genome sequence or raw short reads file in decimal format generated by KAnalyze developed by P. Audano et al. (https://sourceforge.net/projects/kanalyze/). The download included the library index, the library name and sample unknowns. -
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Condor GUI
GUI for managing and working with one or more HTCondor pools.
...It was developed at the Otto von Guericke University Magdeburg, Germany, to support the daily work using HTCondor. Version History: Version 0.9.3: - QDarkStyleSheet is an optional package now Version 0.9.2: - New layout of job file editor - Keyword arguments in job file editor - Linux compatibility -
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TER implements the CCSDS Recommendation for Image Data Compression (CCSDS 122.0-B-1). TER also adds new features to the Recommendation. TER is designed and programmed with the aim to provide a good basis to test and develop the CCSDS Recommendation.
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Fidelity Platform Satellite Emulator
Satellite Emulator
Fidelity Satellite Emulator Description It’s a GPS / GLONASS / GALILEO / BAIDU satellite signal simulator. * Up to 128 satellites simulation; * Selection coordinates on map; * NMEA 0183 output format; * Simulation packets GGA, GSA, GSV, RMC, VTG, ZDA, GLL, HDT; * 2 methods packet generation; * Output to serial; * Output to file; COM port emulator This application tested on com0com emulator. Can be downloaded hear http://sourceforge.net/projects/com0com Libraries If you have... -
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ICE (Interval Calculator for Engineer)
Interval Calculator for Engineer
ICE is a simple mathematical calculator with very useful shortcuts for Engineer: works natively with tolerance, can run Monte Carlo analysis, uses engineer notation, includes most of the day by day functions used by engineers. -
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converts a SAM file to fasta file. SAM file is a file output from bwa alignment software. It outputs aligned fasta file.
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TraceMetrics
TraceMetrics is a trace file analyzer for Network Simulator 3 (ns-3).
TraceMetrics is a trace file analyzer for Network Simulator 3 (ns-3). The main goal is to perform a quick analyzis of the trace file produced by ns-3's simulations and calculate useful metrics for research and performance measurement. Such tool is needed because a research simulation may generate a trace file with thousands of lines, becoming dificult to analyze manually. Due to this, this tool can be handy in case someone needs a metric that the tool already support. TraceMetrics is... -
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PAGC is a command line and web service C library for performing postal address geocoding. A postal address geocoder takes a sufficiently detailed postal addresses and produces a digital map that displays the spatial location of those addresses.
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Leave A Trace Tools
Tools for reading the track data of the project "Leave a Trace"
The art project "Leave a Trace" (LAT) records an displays people movement in real time. It is installed as a permanent exhibition within the Charité in Berlin, Germany. Please find more Details about LAT here: https://leave-a-trace.charite.de/action This sourceforge project provides python tools to read the raw XML data produced by LAT. The data reading module works with python2 and python3. LAT XML Data can be downloaded... -
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Combustion analysis of internal combustion engine in-cylinder pressure data. For use in the development, calibration and modelling of internal combustion engines. Compatible with data recorded with AVL Indiwin/Indimaster/Indiset I-File format. Go to www.catool.org to download the latest version
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VirtualDNA
Make your own flowers
virtualDNA is a Processing3 game with an Android APK file in it. You can make your own flowers by crossing a flowerpool. There is a gamelike feature where you have to make a flower that ressembles a given one. -
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hexcompare
console-mode visual binary diff
hexcompare is a curses-based utility to compare and identify differences between two binary files. These differences are then represented visually with an interactive block diagram.
