Showing 52 open source projects for "python web crawler"

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  • 1
    iCn3D

    iCn3D

    Web-based protein structure viewer and analysis tool

    "I see in 3D" (iCn3D) Structure Viewer is not only a web-based 3D viewer, but also a structure analysis tool interactively or in the batch mode using NodeJS scripts based on the npm package icn3d. iCn3D synchronizes the display of 3D structure, 2D interaction, and 1D sequences and annotations. Users' custom displays can be saved in a short URL or a PNG image. The complete package of iCn3D including Three.js and jQuery is in the directory "dist" after you get the source code with the "Code...
    Downloads: 0 This Week
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  • 2
    QUAST

    QUAST

    Quality Assessment Tool for Genome Assemblies

    ... analysis results in summary tables (in plain text, tab-separated, and LaTeX formats) and colorful plots. The tool also produces web-based reports condensing all information in one easy-to-navigate file. QUAST and its three follow-up papers (MetaQUAST, Icarus, QUAST-LG) papers were published in Bioinformatics; the last paper (WebQUAST) is out in Nucl Acid Research.
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    Downloads: 55 This Week
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  • 3
    The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
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    Downloads: 54 This Week
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  • 4

    miRge3

    Comprehensive analysis of small RNA sequencing data

    An update to Python package to perform comprehensive analysis of small RNA sequencing data, including miRNA annotation, A-to-I editing, novel miRNA detection, isomiR analysis, visualization through IGV, processing Unique Molecular Identifieres (UMI), tRF detection and producing interactive graphical output. miRge3.0 is developed in python v3.8 and is a recent update of our previous version miRge2.0. This build includes command line interface (CLI) and cross-platform Graphical User Interface...
    Downloads: 11 This Week
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    PyAMS

    PyAMS

    PyAMS (Python for Analog and Mixed Signals) CAD approach

    PyAMS (Python for Analog and Mixed Signals) is used to simplify modeling analog elements and simulate electronic circuit The objectives of PyAMS is: - Drawing circuit by schematic (CAD approach); - Simulating the circuit; - Creating new symbols for models; - Creating new models of electrical elements by using Python language with pyams_lib; - Presenting simulation results in waveform or in probe; - PyAMS is developed with Python 3+, ElectronJS and NodeJs - Licensed under: PyAMS...
    Downloads: 4 This Week
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  • 6
    GNNePCSAFT

    GNNePCSAFT

    Smart Thermodynamic Modeling with Graph Neural Networks

    Embark on a cutting-edge journey with our project that harnesses the power of Graph Neural Networks to estimate pure-component parameters of the state-of-the-art Equation of State, ePC-SAFT. We aim to empower users to leverage this robust equation without the need for prior experimental data, revolutionizing the calculation of thermodynamic properties and enhancing process simulations. FeOS is used for the PC-SAFT calculations. The estimated parameters can be used in DWSIM and Aspen HYSYS...
    Downloads: 3 This Week
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  • 7
    Advanced Division

    Advanced Division

    Divide numbers with recurring decimals

    Library / application for dividing numbers with recurring decimals. Written in JavaScript, Python and Dart. Learn more: https://advdiv.ratajs.cz/ Installation instructions: https://sourceforge.net/projects/advanced-division/files/
    Downloads: 0 This Week
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  • 8

    MITRE Annotation Toolkit

    A toolkit for managing and manipulating text annotations

    The MITRE Annotation Toolkit (MAT) is a suite of tools which can be used for automated and human tagging of annotations. Annotation is a process, used mostly by researchers in natural language processing, of enhancing documents with information about the various phrase types the documents contain. MAT supports both UI interaction and command-line interaction, and provides various levels of control over the overall annotation process. It can be customized for specific tasks (e.g.,...
    Downloads: 0 This Week
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  • 9
    bioweb

    bioweb

    polyglot language framework to analyze genetic data

    polyglot framework using Python/C++/JavaScript to fast develop applications to analyze biological sequences
    Downloads: 0 This Week
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  • 10

    Brewery HMI

    Web app for all-grain brewers. Automate your electric brewery.

    This project is UI to guide the user through the steps of home brewing. Each beer has a recipe of ingredients, but it also has a “recipe” for the process to make the beer. This app allows you to load a recipe (BeerXML), guide you through the brewing steps and record any details so that you can improve next time. By default, this app relies on user inputs and feedback from the real-world. There are easy hooks to a link up a real system, so that if you wanted to automate some of the...
    Downloads: 0 This Week
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  • 11
    Tux Math Scrabble

    Tux Math Scrabble

    12÷16×3=9÷4

    Latest version 0.9.1 runs on Python3. Date: June 15, 2023 Online/touch-screen version: https://www.asymptopia.com/tuxmathscrabble Encourages kids to construct compound equations and consider multiple abstract possibilities.
    Downloads: 1 This Week
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  • 12

    weatherPi

    An extensible weather sensor recording network, based on Raspberry Pis

    A distributed network of sensors with a central data store, to record environmental data. Project goals include: * to serve as a teaching outlet for: ** sensor programming ** distributed data collecting ** web APIs ** database ** web UI for numerical data ** graphing data sensibly It also gives me some infotainment in new (to me) technologies, and as an excuse to scatter ever more Raspberry Pis around my home.
    Downloads: 0 This Week
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  • 13

    pyindi-client

    Python binding to the libindi library

    ... there are also bindings for node.js, Tcl (incomplete) and PHP (not useful). As application examples you will find a Python Websocket server with which you may build a web application interacting with Indi servers, and a simple PyQt application similar to the Kstars Indi Control Panel (was built as an exercise). Finally there is an equatorial mount 3D simulator written with Freecad and Python, planned to be connected with the PyIndi module. *** The pyindi-client binding has moved to github. ***
    Downloads: 0 This Week
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  • 14
    Xplico

    Xplico

    Xplico is a Network Forensic Analysis Tool (NFAT)

    Xplico is a Network Forensic Analysis Tool (NFAT). The goal of Xplico is extract from an internet traffic capture the applications data contained. For example, from a pcap file Xplico extracts each email (POP, IMAP, and SMTP protocols), all HTTP contents, each VoIP call (SIP, MGCP, MEGACO, RTP), IRC, WhatsApp... Xplico is able to classify more than 140 (application) protocols. Xplico cam be used as sniffer-decoder if used in "live mode" or in conjunction with netsniff-ng. Xplico is used...
    Downloads: 29 This Week
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  • 15

    GCB_package

    Stand-alone version of the Genome Complexity Browser

    This application allows observing genome rearrangements in prokaryotic genomes. It provides rearrangements frequencies profiles and genomes graph representation.
    Downloads: 0 This Week
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  • 16

    dadosSemiotica

    Collecter and manager of semiotica annalisis data

    This program is a web application to collect and organize data of text analysis. It works with sets of texts and the analysis are done on portions of the length of a sentence. One of the preprocessing modules is based on CoGroo (A LibreOffice & OpenOffice.org Portuguese Grammar Checker).
    Downloads: 0 This Week
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  • 17
    C++ Standard Airline IT Object Library
    That project aims at providing a clean API, and the corresponding C++ implementation, for the basis of Airline IT Business Object Model (BOM), ie, to be used by several other Open Source projects, such as RMOL, Air-Sched, Travel-CCM, OpenTREP, etc.
    Downloads: 0 This Week
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  • 18
    Open Automation

    Open Automation

    Building automation (like KNX or OpenHAB) software (like CometVisu).

    This project aims to provide software usefull in automation tasks like building automation. Different backends are supported like KNX or OpenHAB. Note: The project has moved to GitHub. Please consult: https://github.com/CometVisu/CometVisu - for the CometVisu https://github.com/OpenAutomationProject - for the different OpenAutomation subprojects
    Downloads: 1 This Week
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  • 19
    CircularLogo is a light-weighted, easy to use web application that visualizes the intra-motif dependencies of a DNA or RNA motif.
    Downloads: 0 This Week
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  • 20
    YoMo

    YoMo

    You Only Meter Once - The open hardware smart metering system

    Researches have shown that immediate feedback can increase energy saving dramatically. YoMo aims to empower people using low-cost open hardware smart meters in their household. The metering system consists of a coordination unit, a raspberry pi, and several smart meters, arduino boards equipped with communication shields and our self-designed yomo metering shield. The smart meters are attached to household devices and monitor their energy consumption. The gathered data is timestamped and...
    Downloads: 4 This Week
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  • 21
    C++ Airline Inventory Management Library
    That project aims at providing a clean API and a simple implementation, as a C++ library, of an Airline-related Inventory Management system. That library uses the Standard Airline IT C++ object model (http://sf.net/projects/stdair).
    Downloads: 0 This Week
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  • 22
    Travel Market Simulator

    Travel Market Simulator

    Travel Market Simulator

    That project aims at studying the impact of IT systems interactions on traveller demand and airline revenues. Passenger demand is generated (Monte Carlo) and injected into simulated CRS and airline IT systems. Differential analysis is then performed on various changes compared to a bottom line scenario.
    Downloads: 0 This Week
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  • 23
    Open Airline Revenue Accounting
    That project aims at delivering a reference implementation of a library, estimating and serving average prices paid for air travel products. It is not intended for use by an actual airline, but rather by simulators or other airline-related modules of
    Downloads: 0 This Week
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  • 24

    openSEQ

    NGS compute distro proloaded with pipeline analysis software

    Forked Ubuntu 14.04 minimal install with XOrg and FluxBox desktop environment for web-based pipeline construction and job submission. HOWTO: 1) Set VM network settings to a bridged adapter type. 2) Load VM to client 3) From host: $ ssh -X ubuntu@<foobar> 'firefox && butterfly.server.py --unsecure' --- passwd = 616287xx 5) or ssh into host with X forwarding, and type runme This will launch an X-session of Firefox on the client, which will then be forwarded to the host...
    Downloads: 0 This Week
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  • 25
    Ymap - Yeast Mapping Analysis Pipeline

    Ymap - Yeast Mapping Analysis Pipeline

    Pipeline for large-scale genome changes analysis of genome datasets.

    The active use repository has migrated over to: https://github.com/darrenabbey/ymap The repository here was errantly created with some large binary files included. Attempts to extract the files from the history here have failed. A copy of the history was successfully scrubbed and then hosted at github. -------- Eukaryotic pathogens have complicated and dynamic genomes. To facilitate analysis of copy number variations (CNV), single nucleotide polymorphisms (SNPs), and loss of...
    Downloads: 0 This Week
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