Search Results for "structural software"

..."TomoJ: tomography software for three-dimensional reconstruction in transmission electron microscopy."Messaoudi C et al

A protein contact matrix is 2D representation of the distances between amino acid residues in a 3D protein structure. Protein Contact Map Generator (PCMGen) is a command line tool which takes protein 3D structures (PDB format files) as input and computes contact distances between two chains (from single or two different proteins). These matrix files can be further visualised as Contact Maps using other visualization tools/ programs (like R-heatmaps). Contact Maps can be used to understand...

PSA(Program for Structural Analysis) is able to analyse Framed structures using FEM(Direct Stiffness Method). Apart from giving the analysed results, PSA is able to give user the various stiffness Matrices generated during the analysis, as web page.

OpenFlux2 is an extended version of OpenFLUX (https://sourceforge.net/projects/openflux/) - the modern MATLAB-based modelling software for 13C flux analysis (MFA). The following features were implemented in OpenFLUX2, which were not present in original software: integrated support for calculation and analysis of parallel labeling experiments (PLE), extended statistical analysis of parameter estimation results, calculation of fluxes and measurements correlation, structural identifiability analysis and elements of experimental design.

This project is an open source implementation of axial space syntax software. Space syntax is an analytic urban theory used by researchers to understand elements of the structural aspects of design and how these effect pedestrians and social interaction.

PSIMAP is the Protein Structural Interactome MAP, a map of all the domain level protein-protein interactions in the Protein Data Bank (PDB). PSIsoft is an archive of the software used to generate and analyse PSIMAP.