Showing 32 open source projects for "packages"

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  • 1
    SCADA-LTS

    SCADA-LTS

    A comprehensive Supervisory Control, Data Acquisition, and Execution

    SCADA-LTS is an advanced FOSS, web-based, multi-platform environment designed to build your own Supervisory Control, Data Acquisition, and Management Execution Software - SCADA/MES. Its architecture provides a robust foundation for complex industrial automation and monitoring. Optimized for Smart Infrastructure, it is highly capable of managing industrial PV/BESS, Smart buildings, municipal Water networks or Wastewater treatment, ANPR telemetry, City-wide lighting, and other diverse data...
    Downloads: 14 This Week
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  • 2
    TXM

    TXM

    Unicode XML TEI text analysis platform

    ...rubrique61&lang=en TXM offers a comprehensive range of analysis tools (concordances, collocate search, frequency lists, etc.) based on the powerfull CQP full text search engine (http://cwb.sourceforge.net) and a range of statistical functions (factorial analysis, classification, cooccurrency analysis, etc.) based on R packages (http://www.r-project.org). Read the scientific background at the Textométrie project web site http://textometrie.ens-lyon.fr/?lang=en. Read a full description at the TEI Tools wiki http://wiki.tei-c.org/index.php/TXM.
    Downloads: 12 This Week
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  • 3
    ***** Discontinued (direct part of NetLogo now (since NL v6)!) ***** This extension connects the simulation platform NetLogo with the statistical analysis software R. It adds some new primitives to NetLogo, which offers the interchange of data with R and the call of R functions from NetLogo. See the documentation for more details. There is also the possiblity to open an Interactive R Shell from NetLogo. _______________________________________ Please have also a look on our info...
    Downloads: 0 This Week
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  • 4
    scipion-xmipp

    scipion-xmipp

    Image processing framework to integrate EM software packages.

    Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated into Scipion and contains the algorithms in the core libraries and command line programs.
    Downloads: 0 This Week
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  • MongoDB Atlas runs apps anywhere Icon
    MongoDB Atlas runs apps anywhere

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  • 5
    MolTPC

    MolTPC

    MolTPC provides a solution for fully automatic tautomer enumeration.

    ...Compared to the huge efforts made in experimental investigation of tautomerism, open and free algorithmic solutions for prototropic tautomer generation are surprisingly rare. The few freely available software packages limit their output to a subset of the possible configurational space by sometimes unwanted prior assumptions and complete neglection of ring-chain tautomerism. MolTPC provides an adjustable and fully automatic approach for this problem. The original publication can be found on http://onlinelibrary.wiley.com/doi/10.1002/jcc.23397/full.
    Downloads: 0 This Week
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  • 6

    JCycles

    [frozen] A library for computing cycles in graphs or in Java code.

    [This project is frozen, but has an offspring with more features: https://github.com/jeffhain/jadecy ] JCycles provides treatments to compute cycles, or just strongly connected components, in directed graphs in general, or in classes or packages dependencies graphs parsed from class files (major version <= 51, else does best effort). It uses Tarjan's algorithm for SCCs, and Johnson's for cycles, with continuations instead of recursion, which allows to handle large graphs (< Integer.MAX_VALUE vertices). Requires Java 5 or later.
    Downloads: 0 This Week
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  • 7
    This package contains code for use with Short Read DNA Sequencing technologies, and includes packages for ChIP-Seq, Whole Transcriptome Shotgun Sequencing, Whole Genome Shotgun Sequencing, SNP Detection, Transcript expression and file conversion.
    Downloads: 3 This Week
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  • 8

    JSci - A science API for Java

    A science API for Java

    JSci is a set of open source Java packages. The aim is to encapsulate scientific methods/principles in the most natural way possible. As such they should greatly aid the development of scientific based software.
    Downloads: 2 This Week
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  • 9

    Javafastcomplex

    Javafastcomplex has both mutable and immutable complex numbers

    Javafastcomplex is a fast complex number package for Java. Most existing complex number packages implement only immutable complex numbers, which is easy to understand given that immutable objects lead to more understandable code. Mutable complex numbers would avoid garbage-collection penalty and therefore be faster in calculations. Javafastcomplex implements both mutable and immutable complex numbers, and has a common interface for both, allowing users to write functions that can take either a mutable or an immutable complex number as an argument. ...
    Downloads: 0 This Week
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  • 10
    A collection of Java ports of open source terrain and solar system generation packages. Code has been extensively refactored, extended and documented. GPL License with exception for required libraries.
    Downloads: 0 This Week
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  • 11
    A simple java library for text and object oriented code. Among the different available packages, there are for text analysis (levenshtein and ngram fingerprinting), a grammar framework, simple object persistence (very light and dependence free), ...
    Downloads: 0 This Week
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  • 12
    Seqshell

    Seqshell

    A JAVA GUI for performing the function of Tophat and Cuffdiff

    Combines the Tophat and Cuffdiff functions in one GUI interface. tophat and cuffdiff are required to be pre-installed in the system. By modifying the program, it can be used to execute any command line programs even R packages since R can also be run from commandlines. New functions: Batch processing function for Tophat. You can now execute as many mapping jobs as you want with tophat. This program will save the output into separate folders. An alert email will be sent to your email address when the job is done. (You will need to modify the source code to change the content to meet your special needs) Run-time information will be displayed in a JAVA output window.
    Downloads: 0 This Week
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  • 13
    MetaMaster is a Java-based desktop application for defining, managing and manipulating metadata associated with a collection of data files or datasets (both locally and on the network) which are bundled together into "data packages". ANDS-funded
    Downloads: 0 This Week
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  • 14
    Its an Eclipse 3.5 Plugin. It can be used to find linear paths for unit testing of any method. The linear path covers all the child methods and till leaf level of the hierarchy. The packages which should be covered in the path can be controlled.
    Downloads: 0 This Week
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  • 15
    The final build of this software now is distributed in R, embedded in "RedeR': an R/Bioconductor package for hierarchical and nested network analysis... more about RedeR: http://bioconductor.org/packages/2.9/bioc/html/RedeR.html
    Downloads: 0 This Week
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  • 16
    J2dPathway project are composed of several packages: J2dPathway(biological pathway viewer), Pyrus Pathway Editor (biological CAD), and DNASequenceViewer (platform-independent sequence viewer).
    Downloads: 0 This Week
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  • 17
    JStatCom is a software framework that facilitates the creation of JAVA programs for data based analysis tasks in various domains. It provides ways to call routines from specialized software packages, like Matlab, Gauss, Ox, and possibly others.
    Downloads: 0 This Week
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  • 18
    Franklin Math
    Franklin Math is an open source Java symbolic computer algebra system (CAS), with similarities to commercial math packages such as MATLAB or Mathematica. It allows numeric and symbolic calculations, with built-in functions including plotting commands.
    Downloads: 1 This Week
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  • 19
    A Java Implementation of Ngram Statistic Packages
    Downloads: 0 This Week
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  • 20
    TekMath is a java/swing-based viewer for the Math Markup Language (MathML) that can be easily embedded in custom java applications. It supports both content and presentation markup languages, and depends on no external packages beyond the java runtime.
    Downloads: 0 This Week
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  • 21
    jCpSim (Java CardioPulmonary Simulations) is a set of Java packages for simulation of human physiology (respiration, circulation, ...) and of medical therapy (ventilation, ...). Creation of user interfaces and therapy optimization is supported.
    Downloads: 0 This Week
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  • 22
    Misc packages including a matrix application, a text based minesweeper, and simple console functions bundled to be run from a virtual console. Some packages are independently runnable. http://damf.sourceforge.net/ for more information.
    Downloads: 0 This Week
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  • 23
    BZbyte reports is a fully web based reporting solution created to provide a commercial quality cross platform professional open source alternative to expensive reporting packages such as Crystal Reports(tm), and others. Visit: http://www.bzbyte.com
    Downloads: 0 This Week
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  • 24
    Some Java packages and projects to simplify working with Java. Addionaly some example sourcecode for using special technics in Java.
    Downloads: 0 This Week
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  • 25
    JVClifford
    JVClifford is composed of Java/Java3D packages and executables jars that provide for Clifford element definition, Geometric Algebra operations and geometric scenes modelling and rendering using the n-dimensional geometric algebra affine model
    Downloads: 0 This Week
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