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This package contains code for use with Short Read DNA Sequencing technologies, and includes packages for ChIP-Seq, Whole Transcriptome Shotgun Sequencing, Whole Genome Shotgun Sequencing, SNP Detection, Transcript expression and file conversion.
jCpSim (Java CardioPulmonary Simulations) is a set of Java
packages for simulation of human physiology (respiration,
circulation, ...) and of medical therapy (ventilation, ...).
Creation of user interfaces and therapy optimization is supported.