Showing 82 open source projects for "main"

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  • 1
    The Chemistry Development Kit
    The Chemistry Development Kit (CDK) is a scientific, LGPL-ed library for bio- and cheminformatics and computational chemistry written in Java. The main home page of the CDK is now at: http://cdk.github.io
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    Downloads: 33 This Week
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  • 2
    Geo Arbores
    Geo Arbores is a project for developing tools and extensions for the GIS software OpenJUMP
    Downloads: 21 This Week
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  • 3
    UMHDL

    UMHDL

    Integrated Development Environment (IDE) for learning HDL

    UMHDL is an educational Integrated Development Environment (IDE) intended for learning digital designing with programmable logic devices using Hardware Description Languages (HDL) through simulation. It is an open-source application created at the Miguel Hernández University (UMH). The aim for the UMHDL development was to have a graphical application that allows learning the VHDL language without licensing restrictions (using some existing open-source tools) and requiring few resources. So,...
    Downloads: 2 This Week
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  • 4

    LANGANA-E

    LANGANA-E is an English natural language parser

    LANGANA-E is an English natural language parser. It is the main structure that automatic understanding will be built upon. Automatic understanding can be used for answering questions automatically or finding an answer from a reference text archive.
    Downloads: 0 This Week
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  • Create a personalized AI chatbot for each team in minutes Icon
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  • 5

    Stanford Data Miner

    Tools for integration and analysis of heterogeneous immunological data

    An extensive description of this system is published in the Journal of Translational Medicine (http://www.translational-medicine.com/). In brief, the system consists of two main web applications, a data integration app and a data exploration app. The data integration app is a fully custom Java "Web 2.0" product called Sherpa. Sherpa uses Seam, a platform integrating Asynchronous JavaScript and XML (AJAX), JavaServer Faces (JSF), the Java Persistence API (JPA), and Enterprise Java Beans (EJB...
    Downloads: 0 This Week
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  • 6

    Biogenesis Color Mod

    Mod for evolution simulation and artificial life program Biogenesis

    You can download the Color Mod at the Biogenesis main site too (included in the main download now). You also find the sourcecode there. If you want to post a review, remember that this is only a modification, so comment on my changes, not on the simulation. Original project by Joan Queralt Molina: https://sourceforge.net/projects/biogenesis/ Includes Tyler Colemans "Features Mod": https://sourceforge.net/projects/biogenesisfeatu/ Biogenesis discussion forum: https...
    Downloads: 0 This Week
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  • 7
    mXparser - Math Parser Java C# Library

    mXparser - Math Parser Java C# Library

    A flexible mathematical expressions parser for JAVA, Android, C# .NET

    mXparser is highly flexible parser of math expressions. Software provides easy to use API for JAVA, Android, C# .NET/MONO (CLS). Main functionalities: - basic operators, i.e.: +, -, *, ^, ! - Boolean logic operators i.e.: or, and, xor - binary relations i.e.: =, <, > - math functions (large library of 1-arg, 2-arg, 3-arg - - functions) i.e.: sin, cos, Stirling numbers, log, inverse functions - constants (large library), i.e.: pi, e, golden ratio - n-args functions i.e.: greatest...
    Downloads: 3 This Week
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  • 8
    PUPIL
    PUPIL (Program for User Package Interface and Linking), is a software environment that allows developers to link quickly and efficiently together multiple pieces of software in a fully automated multi-scale simulation. More specifically, it supports QM/MM MD simulations where the user might choose among any of the different MD engines and QM engines, which are connected to PUPIL as external programs through a tiny specific interface. One of the main advantages here is that the user can use most...
    Downloads: 2 This Week
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  • 9
    JAS-mine

    JAS-mine

    Toolkit for agent-based & dynamic microsimulation modelling

    JAS-mine is a Java platform that aims at providing a unique simulation tool for discrete-event simulations, including agent-based and microsimulation models. With the aim to develop large-scale, data-driven models, the main architectural choice of JAS-mine is to use whenever possible standard, open-source tools already available in the software development community. It has built-in utilities for communicating with an underlying relational database. In addition, the platform provides...
    Downloads: 0 This Week
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  • Compliance Operations Platform. Built to Scale. Icon
    Compliance Operations Platform. Built to Scale.

    Gain the visibility, efficiency, and consistency you and your team need to stay on top of all your security assurance and compliance work.

    Hyperproof makes building out and managing your information security frameworks easy by automating repetitive compliance operation tasks so your team can focus on the bigger things. The Hyperproof solution also offers powerful collaboration features that make it easy for your team to coordinate efforts, collect evidence, and work directly with auditors in a single interface. Gone are the days of uncertainty around audit preparation and compliance management process. With Hyperproof you get a holistic view of your compliance programs with progress tracking, program health monitoring, and risk management.
  • 10

    TEESer

    Tool for Engineering Emergent Selforganizing bEhavioR

    Teeser is a java-based integration framework for engineering emergent self-organizing behavior in distributed systems. It contains tools for analysis, tuning, macroscopic probing and simulations of distributed systems. Library of tools can be extended and everybody is encouraged to provide and share its tools with the community. The main idea is to provide application designers ability to seamlessly use tools which are helpful to design self-organizing behavior. Designers can continue...
    Downloads: 0 This Week
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  • 11

    Ghawwas_V4

    An open source system for Arabic corpora processing

    Ghawwas (previously known as Khawas) is an open source system for Arabic corpora processing. Ghawwas V4.0 provides the following main functions: a. Frequency list for single word and N-Grams b. Concordance c. Collocation (MI, CHI Squared, LL, T-Score, Z Score, Dice, Log Dice, Weirdness Coefficient) d. Lexical patterns search e. Two corpora frequency profile comparison based on MI, CHI, LL, T-Score, Z Score, Dice, Log Dice, Weirdness Coefficient f. Accept Windows and UTF-8 character...
    Downloads: 3 This Week
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  • 12
    Viwks

    Viwks

    An application to download information on websites periodically.

    An application to download information on websites periodically. First you create a new 'task', then you select the URL and click on the 'load page' button, after you close the new window you can rename the task, choose the interval, choose the tag and so on, after that you click 'save'. Back at the main menu you can select the 'task' you want, select an output folder and hit 'run'. It's that simple.
    Downloads: 0 This Week
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  • 13
    chemicalInventory is a chemical intelligent tool for managing chemical inventories. Main features: Find chemicals via substructure or text searches. Manage container and shelf locations, check containers in and out or transfer containers between users.
    Downloads: 0 This Week
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  • 14
    The main purpose of CombiTagger is to read files generated by individual PoS taggers and use them to develop and evaluate combined taggers according to a given combination algorithm. http://aaai.org/ocs/index.php/FLAIRS/2009/paper/download/67/296
    Downloads: 0 This Week
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  • 15
    NOTE: For latest version, please visit https://github.com/ispasic/FlexiTerm. FlexiTerm is an open-source software tool for automatic term recognition. FlexiTerm uses a range of methods to neutralise the main sources of term variation. FlexiTerm is robust enough for less formally structured texts, such as those found in patient blogs or medical notes.
    Downloads: 1 This Week
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  • 16

    MOIRAI

    Simple Scientific Workflow System for CAGE Analysis

    Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data...
    Downloads: 0 This Week
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  • 17
    MSqBAT

    MSqBAT

    Label-free protein quantification for LC-MS

    MSqBAT is a freely-available all-platform software application for label-free quantification of proteins from LS-MS data. It was developed in the lab of Dr. Christoph Rösli at the Heidelberg Institude for Stem Cells and Experimental Medicine (HI-STEM) and the German Cancer Research Center (DKFZ). It’s main features are 1) Label-free, MS1-based quantification 2) Support both LC-MALDI-MS- as well as LC-ESI-MS data 3) Supports both GeLC-MALDI-MS- and GeLC-ESI-MS data 4) Convenient, graphical...
    Downloads: 0 This Week
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  • 18
    SmartHMA

    SmartHMA

    Mobile implementation of HMA standardised EO data sources

    The main objective of the SmartHMA project is to develop and validate an open source operational platform architecture which implements a set of HMA standards in native Android client for access to EO Ground Segment data and services. The aim of the project is the development of a mobile application for discovery and distribution of EO data in the acceptable by tablet devices form and entirely based on OGC and HMA specifications. Implementation focuses on accessing the ESA Fedeo environment...
    Downloads: 0 This Week
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  • 19

    WrapImaJ

    Multi-platform API for Image Processing systems in Life Sciences

    ... wraps basic functionalities of ImageJ. The developers of WrapImaJ intend the library to support compatibilty with the main imaging systems available in the Java language and broadly used in the field of life sciences.
    Downloads: 0 This Week
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  • 20
    GeoWE

    GeoWE

    GeoData Web Editing [core SIG Web]

    GeoWE is an open free GIS platform oriented to advanced geodata editing on The Web. The main aim of this initiative is to move the strenghts usually linked to desktop GIS to a web environment, by leveraging open source technologies. This is a free software project that is part of the open source GIS world, and it is developed in Java using the Google Web Toolkit framework. The geowe-core is being developed using the following technologies: - GWT (Google Web Toolkit) - JBoss ERRAI...
    Downloads: 1 This Week
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  • 21

    IQM-Plugin-FFI

    FFI - fractal fragmentation index

    ... newest jar file to the "Plugins" directory which should be located in the directory of your local IQM main application. IQM: https://sourceforge.net/projects/iqm/ Authors of this plugin: Ion Andronache, University of Bukarest, Romania Daniel Peptenatu, University of Bukarest, Romania Helmut Ahammer, Medical University of Graz, Austria
    Downloads: 0 This Week
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  • 22

    IQM-Plugin-frac2D

    Fractal and Lacunarity methods for 2D digital images

    This is an IQM plugin to compute fractal dimensions and lacunarities of 2D digital images using several methods. By Martin Reiss Installation instruction: Copy newest jar file to the "Plugins" directory which should be located in the directory of your local IQM main application. IQM: https://sourceforge.net/projects/iqm/
    Downloads: 0 This Week
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  • 23

    yb Medical Dictionary User Customizable

    java8 based yb (creator's name) medical mini dictionary with text file

    As a medical blogger, I felt that there is a need for platform-independent medical dictionary. Hence 'java 8'. The dictionary must be customizable ie. user should be able to add, delete words. Hence, the use of text file for medical data, instead of xml or some database or sql or some hard-to-understand things. Java 8 can be invoked even from usb pen drives. We have used only one .java file which contains the main class. Compiling it yielded only two classes. Thus simplicity...
    Downloads: 0 This Week
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  • 24

    TraceMetrics

    TraceMetrics is a trace file analyzer for Network Simulator 3 (ns-3).

    TraceMetrics is a trace file analyzer for Network Simulator 3 (ns-3). The main goal is to perform a quick analyzis of the trace file produced by ns-3's simulations and calculate useful metrics for research and performance measurement. Such tool is needed because a research simulation may generate a trace file with thousands of lines, becoming dificult to analyze manually. Due to this, this tool can be handy in case someone needs a metric that the tool already support. TraceMetrics...
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    Downloads: 46 This Week
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  • 25
    CanReg5 (moved to Github)

    CanReg5 (moved to Github)

    Canreg5 is a software package for population based cancer registries

    Cancer registries need a tool to input, store, check and analyse their data. If these data are also coded and verified in a standard way, it facilitates the production of comparable analyses across registry populations. The main goal of the CanReg5 project is to provide a flexible and easy to use tool to accomplish these objectives. CanReg5 is a multi user, multi platform, open source tool to input, store, check and analyse cancer registry data. It has modules to do: data entry, quality...
    Downloads: 0 This Week
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