Search Results for "link"
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Showing 36 open source projects for "link"
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BoPlanets planetarium
BoPlanets shows planets relatively to an observing planet.
BoPlanets is a virtual planetarium showing the planets relatively to any observing planet. The planets can be viewed in ecliptical-, equatorial- or horizontal view. The times of rise, transit and set of a planet can be determined. Click on the link below to the web site of BoPlanets to see the help file of BoPlanets. -
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PUPIL (Program for User Package Interface and Linking), is a software environment that allows developers to link quickly and efficiently together multiple pieces of software in a fully automated multi-scale simulation. More specifically, it supports QM/MM MD simulations where the user might choose among any of the different MD engines and QM engines, which are connected to PUPIL as external programs through a tiny specific interface. One of the main advantages here is that the user can use most of the functionalities that may have those external programs interfaced without the necessity to be reimplemented again on independent interfaces. ...
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StatisticsTables
This is a Java APP for Probability and Statistics Tables
...You can also download the Java code used to create this APP. There are 2 zips. One is for a working windows APP, and the other with complete code and file structure. I used Eclipse to develop the APP. Click the link you want to download to get the Statistics Tables Windows.exe or OS X zipped files. After saving Windows file, just click the jdistabs_win.exe file to install. If you use OS X for MAC, download to the Download directory in the Finder. Then copy to the Desktop folder. Click on the jdistabs_osx.zip to unzip. In the jdistabs_osx folder that is created, create an alias file from the jdistabs_osx.jar file and drag it to the Desktop. ... -
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Javaluator
A java infix evaluator based on "Shunting Yard" algorithm.
... - Fully documented Please visit the project site to learn more : http://javaluator.fathzer.com If you use Javaluator in your product, we will be happy to add a link to your product in the Javaluator web site. Send an email to javaluator@fathzer.com. If you think Javaluator is valuable, vote up below. -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Android Gps to Sms
Android Phone app that sends your GPS location in a SMS to a recipient
This app can be useful for you if you need to send your GPS location in an SMS to any recipient that is in your contact list (or a phone number that you can enter). The sent SMS contains a link to a Google Map with the position that you have sent. The app has been developed in french and english (US). -
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MarDRe
MapReduce-based tool to remove duplicate DNA reads
...This tool allows bioinformatics to avoid the analysis of not necessary reads, reducing the time of subsequent procedures with the dataset. MarDRe is the Big Data counterpart of ParDRe (link above), which employs HPC technologies (i.e., hybrid MPI/multithreading) to reduce runtime on multicore systems. Instead, MarDRe takes advantage of the MapReduce programming model to significantly improve ParDRe performance on distributed systems, especially on cloud-based infrastructures. Written in pure Java to maximize cross-platform compatibility, MarDRe is built upon the open-source Apache Hadoop project, the most popular distributed computing framework for Big Data processing. -
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HSRA
Hadoop spliced read aligner for RNA-seq data
...This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a distributed computing framework for scalable Big Data processing. HSRA currently supports single-end and paired-end read alignments from FASTQ/FASTA datasets. Moreover, our tool uses the Hadoop Sequence Parser (HSP) library (link above) to efficiently read the input datasets stored on the Hadoop Distributed File System (HDFS), being able to process datasets compressed with Gzip and BZip2 codecs. -
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Smith Chart Calculator
Smith Chart Calculator JAVA
...Some features may not available with other OS (e.g. copy to clipboard) GENERAL PUBLIC LICENSE There is a pdf help file online take a look in the files section. There is also a link available in the program itself. -
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Ethernet POWERLINK XDD Tool Suite
Provides eclipse plugins for XDD edit, validation and OD generation.
...Please use the update site to install the plugin in your eclipse environment: http://sourceforge.net/projects/xddpluginsuite.openconf.p/files/update_site/ User Manual: https://goo.gl/hvtLAq XDD editor plugin user manual: https://goo.gl/Fo5pUQ Install via Eclipse marketplace: https://goo.gl/eAZAn9 Link to the openCONFIGURATOR parent project: https://sourceforge.net/projects/openconf/ -
Application Monitoring That Won't Slow Your App DownFull APM with errors, performance, logs, and uptime monitoring. 99.999% uptime SLA on the platform itself.
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GeoWE
GeoData Web Editing [core SIG Web]
GeoWE is an open free GIS platform oriented to advanced geodata editing on The Web. The main aim of this initiative is to move the strenghts usually linked to desktop GIS to a web environment, by leveraging open source technologies. This is a free software project that is part of the open source GIS world, and it is developed in Java using the Google Web Toolkit framework. The geowe-core is being developed using the following technologies: - GWT (Google Web Toolkit) - JBoss... -
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YoMo
You Only Meter Once - The open hardware smart metering system
...On top of the software runs a apache webserver that provides all estimated data on our yomo project homepage. The system does not need any maintenance and works out of the box after the devices were integrated into the households Wi-Fi network. Link to the scientific paper: http://link.springer.com/article/10.1007%2Fs00450-014-0290-8#/page-1 -
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Identifiers.org is a system providing resolvable and persistent identifiers, in the form of URIs, used to identify data for the scientific community, with a current focus on the Life Sciences domain. The provision of resolvable identifiers (URLs) fits well with the Semantic Web vision, and the Linked Data initiative. The resolving services of Identifiers.org rely on the information stored in the MIRIAM Registry.
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Universal Java Matrix Package
sparse and dense matrix, linear algebra, visualization, big data
...The Universal Java Matrix Package provides various visualization methods, import and export filters for a large number of file formats, and even the possibility to link to JDBC databases. Multi-dimensional matrices as well as generic matrices with a specified object type are supported and very large matrices can be handled even when they do not fit into memory. -
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Java Elastic Optical Link Simulator
Discrete event simulator for elastic optical links.
This simulator is primarily intented to test allocation policies for elastic optical links -
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TimeDoctor is a tool to visualize execution traces of tasks, queues, cache behavior, etc. While originally targeting embedded media processors and includes specific features for analyzing audio/video streaming applications it has wider applicability.
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SeqWare has moved to GitHub, see https://github.com/SeqWare SeqWare is a project to create a tool set to work with next generation genome sequencers (SOLiD & Illumina). It includes a LIMS, Pipeline, and Query Engine. Check out the wiki link below to see documentation. You can get the source from the Develop link.
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Autmated Peptide Screening
Screening peptides for MHC and/or MHC-T cell receptor affinity
...These allow for mutation of short 2-15 amino acid peptides, and associated screening of these using AutoDock or AutoDock Vina, allowing for 8 CPU systems to screen 10K peptides a day or 1-2K with flexible residues added in. A detailed method for determining the peptide ligand for any sequenced and modeled T cell receptor will be published and link added at some point. These scripts are written quickly in a couple weeks to meet a task and could be re-written more eloquently. I may or may not work on this project again, the goal would be to introduce amino acids into any protein in openCL to allow automated design on GPU's.Limits-The standard PDB codes used slightly modified, proline not at angles, peptide shld be linear, -
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...It implements a compact, binary format which allows rapid access to data, even with hundreds of thousands of observations. PLEASE NOTE: This source repository is no longer active. See the github link above for the latest version.
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A plugin for the VANTED system, called Glyph-based Link Exploration of Pathways (GLIEP). It helps to guide the navigation and exploration process of interconnected pathway visualization as well as insight into the overall interconnectivity.
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CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74
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ODSSA - is a system for storing, searching and viewing spatially and temporally indexed photos, videos, GIS tracks, ESRI shape, and other files. It consists of an import tool, open API Server, browser based Client for search and viewing files.
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A simple java program using PDFBox and Prefuse libraries to extract text from pdf and display as a graph. Can also link words based on their contexts.
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Goldify is a set of tools that allow automated addition of links into electronic documents. Its main purpose is to allow such addition of links into documents that wish to link to the IUPAC GoldBook (http://goldbook.iupac.org).
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Facelift is a visualization and analysis software for online social networking services. It displays a given community as a node-link diagram and provides several search / filtering functions as well as cluster analysis features.
