Search Results for "graph library"
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Showing 39 open source projects for "graph library"
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Bifurcum
Software to run through a directional graph.
...Technically it is a front end for the library Bifurcumlib. -
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The Chemistry Development Kit (CDK) is a scientific, LGPL-ed library for bio- and cheminformatics and computational chemistry written in Java. The main home page of the CDK is now at: http://cdk.github.io
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In addition to computing co-expression clusters, Maccu fishes potential co-expressed genes for a given bait set. All results can be further processed via graph-level operations so that we can compare graphs based on different reference data.
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GeoTools, the Java GIS toolkit
Toolkit for working with and mapping geospatial data
GeoTools is an open source (LGPL) Java code library which provides standards compliant methods for the manipulation of geospatial data. GeoTools is an Open Source Geospatial Foundation project. The GeoTools library data structures are based on Open Geospatial Consortium (OGC) specifications. -
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Symja Java Computer Algebra
Symja - Java computer algebra language & symbolic math library
Symja - computer algebra language and Java symbolic math library. Moved to https://github.com/axkr/symja_android_library. The Android App can be found at: https://github.com/axkr/symja-example -
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JGraphT is a free Java class library that provides mathematical graph-theory objects and algorithms. JGraphT supports a rich gallery of graphs and is designed to be powerful, extensible, and easy to use.
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BifurcumLib
A library for running through a directional graph.
This is the library for the project Bifurcum. It does all the work. It has a simple algorithm (Deep First Search with modifications) and allows sorting children before traversing. This library sums up the authors 4-years experience when programming a commercial tool for graph traversing (which used a much more advanced algorithm) and coaching its users. -
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popt4jlib
Parallel Optimization Library for Java
popt4jlib is an open-source parallel optimization library for the Java programming language supporting both shared memory and distributed message passing models. Implements a number of meta-heuristic algorithms for Non-Linear Programming, including Genetic Algorithms, Differential Evolution, Evolutionary Algorithms, Simulated Annealing, Particle Swarm Optimization, Firefly Algorithm, Monte-Carlo Search, Local Search algorithms, Gradient-Descent-based algorithms, as well as some well-known network flow and other graph algorithms. ... -
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A spring-based 3D graph layout tool written in Java. Rendering is performed in OpenGL via the JOGL library.
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ThéMA libs
Commons and utils Java classes used in ThéMA projects
This project contains 7 Java libraries developped in ThéMA laboratory : - common - data - parallel - drawshape - graph - network - msca -
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JAGAL: Java Graph Library
Java graph library
JAGAL provides implementations for directed graphs (weighted and unweighted) and varoius types of transition systems as well as utils for graph traversal and modification. JAGAL builds upon the Java library TOVAL (located at http://sourceforge.net/p/toval). To use JAGAL, make sure the TOVAL library is on the build path. This library uses and encloses jGraphX (https://github.com/jgraph/jgraphx). A documentation for JAGAL can be found under http://doku.telematik.uni-freiburg.de/jagal. -
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SEWOL: Security-oriented Workflow Lib
Java Library for workflow handling
SEWOL provides support for the handling of workflow traces. It allows to specify the shape and content of process traces in terms of entries representing the execution of a specific workflow activity. Currently it supports plain text, Petrify, MXML and XES log file types. In order to specify security-related context information, SEWOL provides access control models such as access control lists (ACL) and role-based access control models (RBAC). SEWOL uses and encloses the following... -
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ISO GrAF
Experimental Java library for reading and writing GrAF/XML files.
The Graph Annotation Framework (GrAF) models linguistic annotations using a data model based on Graph theory and algorithms. The GrAF standard is a work product of ISO TC37SC4 Working Group 1. This Java library is NOT part of the GrAF standard and standoff annotation files produced by the library may not be GrAF compliant. -
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Java implementation of Fuzzy Cognitive Maps (FCM). Implementation aims to be: small (and fast), simple to use, flexible enough to be used as a basis for other projects / libraries.
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HRDAG
Framework for Hierarchical Graph Decomposition
This is a framework used to decompose hierarchical graphs, i.e.,graphs which were created from or contain a hierarchy of modules. Each module is reused several times in the hierarchy. This may be useful to reverse-engineer human constructs like electronic equipment, manufactured machines, or bureaucratic hierarchies; but also to decompose natural constructs like gene-relation or protein-relation nets. -
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Graph-RAT is a database abstraction layer designed to make it easy to use a large library of graph-analysis routines on a database as well as add new kinds of algorithms to data mining.
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Agent.GUI
The Project moved to github https://github.com/EnFlexIT/AgentWorkbench
The project has moved to github https://github.com/EnFlexIT/AgentWorkbench Agent.GUI is a simulation framework and toolkit based on the JADE framework. It provides functionalities for time aspects, agent-environment interaction, visualization and load balancing, Furthermore, the included application focuses the usability for end users. -
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MuLaViTo
A framework for the visualization of multi-layer networks
MuLaViTo is a multi-layer visualization framework which allows to visualize relations between multiple graphs in derived applications. Moreover, it provides helpful means like k-shortest path algorithms, running algorithms in a separate thread, ... -
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Plexus is a Java library with specifications and implementations for generic graph data structures. Like the Java Collections Framework, vertices and edges are containers for arbitrary user-defined objects.
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Graph visualization using hyperbolic geometry (hyperbolic trees, but also general graphs). Applications cover web site structures, topic maps, organisational charts and wikis.
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Java Universal Network/Graph Framework
Java graph/network library
JUNG provides a common and extendible language for the modeling, analysis, and visualization of data that can be represented as a graph or network. New version now available on GitHub: https://github.com/jrtom/jung/releases/tag/jung-2.1 -
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G.A.V. (Graph Algorithm Visualizer) is a tool that visualizes algorithms from graph theory. A step-by-step visualization from each different algorithm allows the user to understand the particular algorithm very easily.
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Aim is to extract the information from the cadastral maps which is stored as scanned images. The extracted information is stored using graph representation. Then we convert these infomation in to CityGML format to visualize and communicate.
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Knotwork is a graphical application to create knotworks in a celtic, arabic or viking style. User draws a graph defined by vertices and edges, which gives the basis for building the knotwork. Web page: http://knotwork.sourceforge.net/index.html
