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  • 1
    jmathstudio - Java Image/Signal toolkit

    jmathstudio - Java Image/Signal toolkit

    Java toolkit for discrete Image and Signal processing.

    JMathStudio is a Java based digital image and signal processing toolkit/library. It is simple to use, portable, light (~300 Kb), extendable and free. Full source code available at https://github.com/bhavyaajani/jmathstudio Android compatible JMathStudio is available @ https://sourceforge.net/projects/jmathstudio-android/
    Downloads: 0 This Week
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  • 2
    IMPACT_S

    IMPACT_S

    Integrated Multiprogram Platform Analyze & Combine Tests of Selection

    Maldonado E, Sunagar K, Almeida D, Vasconcelos V, Antunes A (2014) IMPACT_S: Integrated Multiprogram Platform to Analyze and Combine Tests of Selection. PLoS ONE 9(10): e96243. doi: https://doi.org/10.1371/journal.pone.0096243
    Downloads: 0 This Week
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  • 3
    Mechaglot, Calculate Semantic Similarity

    Mechaglot, Calculate Semantic Similarity

    Calculate semantic similarity for any human and human-like languages

    ...The goal of this project is simple: Input two sentences of the same language, and obtain the number (from 0 to 1) denoting the similarity between the inputted sentences, according to semantic categories. This project models my previous project: https://sourceforge.net/projects/semantics/ Difference is, this project does not use any database and computes any Strings as an input. JAVA was the language of choice, due to availability of modelling tools. This work is licensed under the Creative Commons Attribution-ShareAlike 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/4.0/. ...
    Downloads: 0 This Week
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  • 4

    picard

    A set of tools for working with high-throughput sequencing data

    A set of tools (in Java) for working with next generation sequencing data in the SAM/BAM format. Note that development has moved to GitHub at https://github.com/broadinstitute/picard and support is available on the GATK forum at http://gatkforums.broadinstitute.org/categories/ask-the-team
    Downloads: 54 This Week
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  • 5
    Agent.GUI

    Agent.GUI

    The Project moved to github https://github.com/EnFlexIT/AgentWorkbench

    The project has moved to github https://github.com/EnFlexIT/AgentWorkbench Agent.GUI is a simulation framework and toolkit based on the JADE framework. It provides functionalities for time aspects, agent-environment interaction, visualization and load balancing, Furthermore, the included application focuses the usability for end users.
    Downloads: 0 This Week
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  • 6
    GeoGit

    GeoGit

    Geospatial Distributed Version Control System

    NOTE: this project has been renamed as GeoGig. Use this URL to get to the GeoGig downloads: https://sourceforge.net/p/geogig Welcome to the GeoGit project, exploring the use of distributed management of spatial data. GeoGit draws inspiration from Git, but adapts its core concepts to handle versioning of geospatial data. Users are able to import raw geospatial data (currently from Shapefiles, PostGIS or SpatiaLite) in to a repository where every change to the data is tracked. ...
    Downloads: 0 This Week
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  • 7

    Khawas

    An Arabic Corpora Processing Tool

    The new version is available at https://sourceforge.net/projects/ghawwasv4/
    Downloads: 0 This Week
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  • 8

    IQuant

    A pipeline for quantitative proteomics based upon isobaric tags

    ...This website contains the IQuant software, an example data labeled by iTRAQ-8plex for testing and a user's manual. If you have any question about IQuant, please contact me: wenbo@genomics.cn. The source code of IQuant can be found here "https://sourceforge.net/p/iquant/code/".
    Downloads: 0 This Week
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  • 9
    jmathstudio-android

    jmathstudio-android

    Android API for discrete Image and Signal processing.

    ...A minimum Android platform with API Level 3 is required for Android projects using this API. Author: Bhavya Ajani (jmathstudio@gmail.com) Refer pure Java based implementation @ https://sourceforge.net/projects/jmathstudio/ Android is a trademark of Google Inc.
    Downloads: 0 This Week
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  • 10

    javaGeom

    A geometry library for Java

    ...Provides a general framework for manipulating and creating geometric primitives, computing intersection points between shapes, composing them to create new shapes, and performing some measurements. Important note: the repository has now moved to GitHub: https://github.com/dlegland/javaGeom Please update bookmarks!
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    Downloads: 1 This Week
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  • 11
    The National Library of New Zealand's Metadata Extraction Tool automatically extracts preservation-related metadata from digital files, then output that metadata in XML formats. It can be used through a graphical user interface or command-line interface. Please take the latest code from 'https://github.com/DIA-NZ/Metadata-Extraction-Tool.git'. The code on source forge will not be updated henceforth as it is moved to github.
    Downloads: 6 This Week
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  • 12
    coalescent

    coalescent

    Software tool for Research in Computational Population Genetics

    Development of exact and approximate methods (Importance Sampling and MCMC based) for computing likelihoods under the standard population genetic models of mutation,migration & recombination. Project issues are mainatined at https://freecode4susant.atlassian.net/browse/COALESCENT
    Downloads: 0 This Week
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  • 13

    Quadriga

    Quadruple Network Management System

    Quadriga is a web-application that acts as a clearing-house for text annotations -- in the form of contextualized triples, or “quadruples,” that form complex graphs -- generated with the Vogon desktop application (https://sourceforge.net/projects/gobtan/), and as an environment for managing text-annotation projects. It relies on a central authentication system for user authentication, a dictionary service (Wordpower) and an authority file service (Conceptpower). Quadriga can connect to a DSpace repository, allowing users to select items stored in the repository for annotation. ...
    Downloads: 0 This Week
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  • 14

    JCycles

    [frozen] A library for computing cycles in graphs or in Java code.

    [This project is frozen, but has an offspring with more features: https://github.com/jeffhain/jadecy ] JCycles provides treatments to compute cycles, or just strongly connected components, in directed graphs in general, or in classes or packages dependencies graphs parsed from class files (major version <= 51, else does best effort). It uses Tarjan's algorithm for SCCs, and Johnson's for cycles, with continuations instead of recursion, which allows to handle large graphs (< Integer.MAX_VALUE vertices). ...
    Downloads: 0 This Week
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  • 15
    cy2fluxviz

    cy2fluxviz

    cy2fluxviz : Cytoscape 2 plugin for flux distribution visualization

    cy2fluxviz - Cytoscape 2 Plugin for the visualization of flux distributions in networks. Latest releases from https://github.com/matthiaskoenig/cy2fluxviz
    Downloads: 0 This Week
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  • 16
    An easy-to-use simulator for decentralized distributed scheduling in Clusters, Grids, and Cloud ecosystem MaGate 2.0 is now available from github! https://github.com/huangye177/magate
    Downloads: 0 This Week
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  • 17
    MobTracker

    MobTracker

    Android Mobile Tracking Platform

    Android Mobile Phone Tracking Platform merging sourceforge projects: https://sourceforge.net/projects/gpsmapper/ & https://sourceforge.net/projects/gpsinfo/ Android mobile GPS/Network location sended to server. Two kinds of viewers: 1. Google maps 2. NASA WorldWind
    Downloads: 0 This Week
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  • 18
    NanoTrackJ

    NanoTrackJ

    NanoTrackJ - Size characterization of freely diffusing nanoparticles

    NanoTrackJ moved to GitHub! Please see: https://github.com/thorstenwagner/ij-nanotrackj or http://fiji.sc/NanoTrackJ
    Downloads: 0 This Week
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  • 19
    Cuttlefish aims to be a highly extensible visualization and analysis platform for all kinds of network data. IMPORTANT: The Cuttlefish project has been migrated to github: https://github.com/dev-cuttlefish/cuttlefish
    Downloads: 1 This Week
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  • 20
    Topiary Explorer
    TopiaryExplorer has moved to GitHub. Find the new project info page here: https://github.com/qiime/Topiary-Explorer. If you need help or would like to add a bug/feature request, please do so there.
    Downloads: 0 This Week
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  • 21
    HAWK - PDF Text Search Java Project

    HAWK - PDF Text Search Java Project

    No more support for this project - TAKE A LOOK AT FALCONSEARCH

    No more support for this project - TAKE A LOOK AT FALCONSEARCH "https://sourceforge.net/projects/falcontextsearch/"
    Downloads: 0 This Week
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  • 22

    Evidence bucket

    A minimalist cross-platform transcription software

    This project was moved to https://code.google.com/p/evidence-bucket/
    Downloads: 0 This Week
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  • 23

    algebrain

    Math Parser for Java

    Moved to GitHub https://github.com/fedups Algebraic equation processing at run time for Java programs. Supports variables, functions with parameters, rate table lookups, an embedded "if" function... Infinitely extensible, very small footprint.
    Downloads: 0 This Week
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  • 24

    LQFB-analyser

    A lqfb delegation analyser. A 3d directed weighted multi graph.

    A rich client to analyse data from a liquid-feedback (http://liquidfeedback.org/) instance, for now it's a 3d graph explorer to inspect the delegations. It's an application based on the eclipse platform (indigo). To be precise its a directed weighted multi graph browser in 3d. Find out more in the wiki https://sourceforge.net/p/lqfbanalyser/wiki/Home/ . Generated reports https://sourceforge.net/p/lqfbanalyser/wiki/generated%20lqfb%20reports/ .
    Downloads: 0 This Week
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  • 25

    BioLemmatizer

    Lemmatization tool for morphological analysis of biomedical literature

    ...It focuses on the inflectional morphology of English, including the plural form of nouns, the conjugations of verbs, and the comparative and superlative form of adjectives and adverbs. README: https://sourceforge.net/projects/biolemmatizer/files/ The BioLemmatizer 1.2 release adds an optional functionality to normalize British English spellings into American English spellings and then retrieve corresponding lemmas. If you use the BioLemmatizer to support academic research, please cite the following paper: Haibin Liu, Tom Christiansen, William A Baumgartner Jr, and Karin Verspoor BioLemmatizer: a lemmatization tool for morphological processing of biomedical text Journal of Biomedical Semantics 2012, 3:3.
    Downloads: 0 This Week
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