Search Results for "gnu science" - Page 8
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Showing 1765 open source projects for "gnu science"
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Semantic Assistants
Natural Language Processing (NLP) for the Masses
Semantic Assistants support users in content retrieval, analysis, and development, by offering context-sensitive NLP services directly integrated in standard desktop clients, like a word processor, and web information systems, like a wiki. -
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A spring-based 3D graph layout tool written in Java. Rendering is performed in OpenGL via the JOGL library.
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HermeneutiX
Your graphical tool for Syntactic/Semantic Structure Analysis of texts
HermeneutiX is a tool for diagramming syntactic and semantic structures of complex (not necessarily foreign-language) texts (e.g. bible or other historical excerpts). HermeneutiX is now part of SciToS (the scientific tool set). Starting with version 2.0.0, HermeneutiX can be found on GitHub. Please check out the release summary: https://github.com/scientific-tool-set/scitos/releases For an introduction, check out this video: https://youtu.be/uQjewyG0Ad8 PS: To run a Java... -
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The Helsinki Finite-State Transducer toolkit is intended for processing natural language morphologies. The toolkit is demonstrated by wide-coverage implementations of a number of languages of varying morphological complexity.
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circuitmod
The Future of the Java Circuit Simulator
Circuitmod is a circuit simulator that extend the capacity of the original Falstad's Java Circuit Simulator into CMOS Chips, Led Arrays, Led Matrix and PIC Programming. The Horizon is limitless. Try today. -
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zamiaCAD is a modular and extensible platform for HW design, analysis, and research. It translates a HW description (VHDL or Verilog) into a language independent IG structure. Applications like a simulator and an eclipse GUI build on top of the IG.
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freedomotic
Open IoT Framework
Freedomotic is an open source, flexible, secure Internet of Things (IoT) development framework, useful to build and manage modern smart spaces. It is targeted to private individuals (home automation) as well as business users (smart retail environments, ambient aware marketing, monitoring and analytics, etc). Freedomotic can interact with well known standard building automation protocols as well as with "do it yourself" solutions. It treats the web, social networks and branded frontends as... -
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MOIRAI
Simple Scientific Workflow System for CAGE Analysis
Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data.... -
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Java bio-informatics library to analyze and convert genomic sequence and assembly data. This library was created and used by the J. Craig Venter Institute (JCVI)
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jalicanto
Traveling Salesman Problem "window time based" aproximate solver
Time based Traveling salesman problem solver. Using iterated local search algorithm, implements xkick perturbation Programmed in Java. A class to use the TSP Suite(Thomas Weise, Raymond Chiong, J ¨org L¨assig, Ke Tang, Shigeyoshi Tsutsui, Wenxiang Chen, Zbigniew Michalewicz, Xin Yao, Benchmarking Optimization Algorithms: An Open Source Framework for the Traveling Salesman Problem. 2014.),is implemented. -
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spectralHMM
A spectral method for inferring selection from time series data
***WARNING*** This software was migrated to: https://github.com/popgenmethods/spectralHMM Support and updates will only be available at this new address. This software implements the algorithms described in the following paper: Steinrücken, M., Bhaskar, A. and Song, Y.S. A novel spectral method for inferring general diploid selection from time series genetic data. Annals of Applied Statistics, Vol. 8, No. 4 (2014) 2203-2222 -
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DataCleaner
Data quality analysis, profiling, cleansing, duplicate detection +more
DataCleaner is a data quality analysis application and a solution platform for DQ solutions. It's core is a strong data profiling engine, which is extensible and thereby adds data cleansing, transformations, enrichment, deduplication, matching and merging. Website: http://datacleaner.github.io -
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NOTE: Use of this codebase is NOT RECOMMENDED. This project has been migrated to github at http://jaerproject.net (or https://github.com/SensorsINI/jaer for the Java code). Commits have been disabled for the subversion sourceforge repository and new development is being done on the github repository. Java tools for Address-Event Representation (AER) neuromorphic processing. Uses USB hardware. See wiki at https://sourceforge.net/p/jaer/wiki/
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Maui
Maui is the Maltcms User Interface
Maui is the Maltcms User Interface, a rich client application for Chromatography-Mass Spectrometry and related research areas. -
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RDRPOSTagger
A Rule-based Part-of-Speech and Morphological Tagging Toolkit
RDRPOSTagger is a robust, easy-to-use and language-independent rule-based toolkit for Part-of-Speech (POS) and morphological tagging. RDRPOSTagger obtains fast performance in both learning and tagging process. RDRPOSTagger also achieves a very competitive accuracy in comparison to the state-of-the-art results. RDRPOSTagger now supports pre-trained POS and morphological tagging models for Bulgarian, Czech, Dutch, English, French, German, Hindi, Italian, Portuguese, Spanish, Swedish, Thai... -
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MELTING is a software to compute, for a nucleic acid duplex, the enthalpy and the entropy of the helix coil transition and then the melting temperature. Four types of hybridization are possible : DNA/DNA, RNA/RNA, RNA/DNA and mRNA/RNA.
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Java Information Retrieval System (JIRS) is an information retrieval system based on passages. This system has the advantage of being able to change to the different modules from the system and their functionality modifying the configuration XML file
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Analog Insydes is a Mathematica toolbox for symbolic analysis of analog electronic circuits. This project provides a set of free add-ons to Analog Insydes, including a Java front-end and a native netlister for Cadence's Analog Design Environment (ADE).
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VeriSiMPL
Verification via biSimulations of Max-Plus-Linear models
This toolbox is used to generate finite abstractions of autonomous Max-Plus-Linear (MPL) systems over R^n. Abstractions are characterized as finite-state Labeled Transition Systems (LTS). The LTS finite abstractions are shown to either simulate or to bisimulate the original MPL system. LTS models are to be verified against given specifications expressed as formulae in Linear Temporal Logic (LTL) and Computation Tree Logic (CTL). The toolbox intends to leverage the NuSMV model checker. Models... -
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Maps coloring
Four color theorem application
Search for a pencil and paper proof of the four color problem. See http://4coloring.wordpress.com for info. Please let me know what you think about this application. Also visit the youtube channel: http://www.youtube.com/user/mariostefanutti/videos -
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WrapImaJ
Multi-platform API for Image Processing systems in Life Sciences
WrapImaJ purposes to be a multi-platform wrapper for different Image Processing systems for: - using the Java programming language. The purpose of WrapImaJ is not to combine an exhaustive collection of all functionalities of different imaging system, but to offer a simple, concise Application Programming Interface (API) - allowing to develop imaging software, the source code of which is independent from the underlying imaging system on which it relies. In it's current form, it... -
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CamBA is a Linux package for statistical analysis, by script/GUI, of neuroimaging data (fMRI/sMRI), developed at the Brain Mapping Unit, University of Cambridge. Non-parametric permutation-based statistics. Input images: 4D NiFTI files, output: HTML/
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MoCObench
Benchmark instances for multiobjective combinatorial optimization
Benchmark instances for multiobjective combinatorial optimization -
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J-ICE stands for Jmol interface for crystallographic and electronic properties. Is an extension of the powerful, platform independent molecular visualizer Jmol, towards crystallographic and electronic properties. More info will be given soon.
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fantail-mlkit
The fantail machine learning toolkit (Moved)
Moved to https://github.com/quansun/fantail-ml
