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graphite: a portable graphics library, written in Java, JOGL and Postscript that allows rapid generation of high-quality graphs using an efficient, compact Java engine.
CryptoHelper is a Java program designed to aid in the decryption of classical ciphers, ie pre WWII ciphers. It brings together tools like frequency analysis, friedman tests, enciphering/deciphering for several clasical ciphers, and brute force algorithm
Wordcorr automates the tedious and risky process of tabulating and managing the sound correspondences used in working out the historical development of natural languages. Initial support was from NSF.
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SACIC - Semi-Advanced Command Interpreting Calculator - is a small calculator application capable of evaluating mathematical expressions with arbitrary precision, handling variables, drawing graphs, solving equations and more. It also supports simple scr
msgnet is a library that implements a simulation framework with visualisation for message passing networks.
This might be useful for teachers and students of distributed systems courses.
ISYS (Integrated SYStem) is a Java-based plugin framework for loosely-coupled integration of independently developed components. It provides both service-oriented and event-based communication whose semantics may be contributed by component developers.
Framework for storing and editing Forestry-related XML data, with a specialised graphical interface for each object type. Plug-in API for adding functionality. Coded in Java, uses WebStart for distribution, swing GUI, ~100k lines of code.
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CRANKS is an Java application that uses the Swing toolkit to provide an interactive environment for the animation and kinematic synthesis of four-bar mechanisms created through a series of geometrical constructions.
neochip is a collection of algorithms for high-density oligonucleotide microarrays. The current version contains heuristic algorithms that attempt to improve the quality of arrays by re-designing their layout (the location of the probes on the chip).
DNAGalaxy is an attempt to produce an open-source bioinformatics software alternative to the expensive DNAStar Lasergene software. Its features currently include Blast and Entrez searching, a frontend to clustal and a sequence editor. It requires java1.5
ISAS is a configurable computer instruction set architecture simulator, written in Java, that can be used to quickly define, test and measure performance of computer instruction set architectures.
MicroArray Genome Imaging and Clustering Tool (MAGIC tool) is a platform-independant java program for analyzing MicroArray data (.tiff scans & .txt godlists) via graphs and clustering operations (including QT-clustering). http://www.bio.davidson.edu/magic
GiANT is a graphical interface for computer algebra systems (OS X/UNIX/Win). Currently GiANT lets the user work with number fields via KASH, but we aim to develop it into a GUI Library to run on top of any CAS and expose any of its functions.
Alan is a Java Implenmentation of a Turing Machine for educational purpose. Features include: - Easy to use GUI - Many example Programs - ReUsable Turing Machine Component
brCluster is a class library, written in java, that implements generic clustering algorithms carefully designed to allow its aplication in any kind of data. The algorithms implemented are K-means and Hierarchical Clustering (Simple and Complete Link).
TurboGPS is a Java application giving a comprehensive solution for GPS handling. This includes easy editing, sorting and displaying (on a map) waypoints. TurboGPS supports Garmin serial devices and WGS84/RT90 Datum.
EM Demonstration is a little tool for Physics teachers and students that helps model electric fields in flux lines as well as draw equipotential regions. Simply put, it is a classroom demonstration/modeler. Please help support us and donate.
FormantStat is a collection of tools for formant
statistics (phonetics and linguistics): Data Splitter/Extractor,
Plotter, Analyzer and Normalizer. It is (being) written
to help the research on the formant patterns of vowels
in human speech.
Mobile Agent Server and Controller(MASC) - is a server, controller and viewer for aglets, written in Java, with an attractive and user-friendly GUI .MASC is easy to install and configure.It also provides mail notification,schedule,aglet class browser,etc.