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Molevolve is a Java library for running a Genetic Algorithm to model the 3-dimensional structures of peptide chains from amino-acid sequences. Client code can specify its own peptide chain model, fitness functions and GA operations. Requires JDK 1.5.
CryptoHelper is a Java program designed to aid in the decryption of classical ciphers, ie pre WWII ciphers. It brings together tools like frequency analysis, friedman tests, enciphering/deciphering for several clasical ciphers, and brute force algorithm
JAligner is an open source Java implementation of the dynamic programming algorithm Smith-Waterman with Gotoh's improvement for biological local pairwise sequence alignment with the affine gap penalty model.
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Java Randomness Test Suite is a gui application to run randomness tests on random stream resource (file or algorithm). Application can be run in command line. Includes general statistical tests, NIST and DIEHARD tests.
IslandEv distributes a Genetic Algorithm (like <a href="/projects/jaga">JaGa</a>) across a network (see <a href="/projects/distrit">DistrIT</a>) using an island based coevolutionary model in which neighbouring islands swap migrating individuals every
SimAlgPro - it is a tool to simulate the main algorithms for processor planning. to contribute to the learning process. It allows visualize of interactive form the algorithm application and results.
Realistic Workplace Simulations that Show Applicant Skills in Action
Skillfully transforms hiring through AI-powered skill simulations that show you how candidates actually perform before you hire them. Our platform helps companies cut through AI-generated resumes and rehearsed interviews by validating real capabilities in action. Through dynamic job specific simulations and skill-based assessments, companies like Bloomberg and McKinsey have cut screening time by 50% while dramatically improving hire quality.
Simulated annealing package written in Java using simplex downhill algorithm from Numerical Recipies in C++/FORTRAN/C
It is intended for use "behind the scenes" in applications, and it is optimised for ease of integration.
Completely standalone,
A fast, simple method of establishing musical genre of arbitrary compressed audio files calculated by comparisons with training sets. Program currently consists of a java console program. GUI front end, algorithm upgrades to come.
This project comprises a collection of libraries and applications for the field of program analysis. The starting point is a type analysis for Java programs using Agesen's Cartesian Product Algorithm.
MAGMA: Multiobjective Analyzer for Genetic Marker Acquisition
A genetic algorithm for generating SNP tiling paths from a large SNP database
based on the competing objectives of cost (number of SNPs) and coverage (haplotype blocks):
Hubley R., Zitzler
Java port and extension of MLC++ 2.0 by Kohavi et al. Currently contains ID3, C4.5, Naive (aka Simple) Bayes, and FSS and CHC (genetic algorithm) wrappers for feature selection. WEKA 3 interfaces are in development.
A collection of implementations of the Lovins stemmer as described in "Development of a Stemming Algorithm" by Julie Beth Lovins (published in "Mechanical translation and computational linguistics", 11:22-31, 1968).
aVolve is an evolutionary/genetic algorithm designed to evolve single-cell organisms in a micro ecosystem. It currently uses the JGAP Genetic algorithm, but does include a primitive genetic algorithm written in Python.
A java command-line application where the main goal is to solve any simplex problem. It's a team-work school project. It can be usefull for other students who needs to understand the simplex algorithm.
The Stemmer class transforms a word into its root form. The input word is provided from the add() methods. The stem() method will return the stem as will toString() after stem() has been
called). The clear() method will wipe the Stemmer buffer and allow a new word to be input.
This version extends Martin Porter's original stemming algorithm by allowing capital letters to exist in words. This version should also be plugged in wherever the old algorithm is used with
few accommodations...
This project is an implementation of a BML realizer using ROS. The algorithm uses an event-driven architecture, based on Petri nets, to ensure synchronization constraints for robots.
GAZES - Genetic Algorithm Zombie Eradication Simulation Grid-based simulator for zombie scenario. The units will use genetic algorithm to determine their actions on a cycle by cycle basis. This is a school project, so is likely on hiatus for summer.