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The program simulates N trials of the Monty Hall Problem and outputs the successes of both switching and not switching the doors. http://en.wikipedia.org/wiki/Monty_Hall_problem http://www.youtube.com/watch?v=cXqDIFUB7YU
Knime (http://www.knime.org) nodes for sequence bioinformatics. Sequime is an eclipse plug-in for the KNIME data mining platform, providing additional nodes for reading, processing and visualizing sequence information.
This is a pipeline that is used to store an EST or Genome assembly information including reads and their alignment in a mysql database. Further more, it provides a set of scripts to mine SNPs and other statistics from the assembly.
Parsers for biological data based on scanner generators like Flex (C), Re2c(C), Jflex (Java) and Ifickle (Tcl). This scanner generators are providing easier maintainance, development and higher speed than hand written scanners. Scanner output is SQL.
Java ILP is a simple java interface to (mixed) integer linear programming solvers such as lp_solve, Glpk, Gurobi, SAT4J (0-1 ILP), MiniSat+(0-1 ILP), CPLEX, or Mosek. (documentation at http://javailp.sourceforge.net/)
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Corra [BMC Bioinformatics 2008] is a computational framework & tools for discovery proteomics using label free LC-MS and ATAQS [BMC Bioinformatics 2011] is a computational framework & tools for validation proteomics using SRM LC-MS method.
Josceleton is a Java library providing access to the Microsoft Kinect. It allows you interact with multiple users by either looking at their raw coordinates of several joints, or simply use the pre-built detectors for certain gestures and posi
GenoGUARD is a DNA sequence screening software that implements the best match method recommended by the federal government to detect the presence of biosecurity threats in synthetic DNA orders.
A prototype input method for OCZ's NIA headset allows full text entry. It is based on Morse Code (3 keystrokes generated from the NIA software) and can produce full English text with all ASCII symbols, uppercase and lowercase.
This software simulates cellular behavior based on specific rules (e.g. Game of Life or Wireworld). The UI will be replaceable and there will be a feature for importing rules from a file based on a format developed for this purpose.
PhyloSort sorts phylogenetic trees by searching for user-specified subtrees that contain a monophyletic group of interest defined by operational taxonomic units.
swIMP (swig-based Interfaces for Mathematical Programming) provides Java wrappers for solvers written in C or C++. The current focus is on accessing OSI-compatible linear programming (LP) solvers from the Coin-OR-project (e.g. Clp, GLPK, MOSEK, CPLEX).
HATS (Haplotype Amplification in Tumor Sequences) is a tool that calls the amplified alleles, and thus amplified haplotype, in copy number aberration regions in next generation sequencing tumor data. The amplified haplotype may reveal gene variants.
iGesture is a Java-based gesture recognition framework providing access to multiple gesture recognition algorithms and different input devices. The iGesture Workbench supports the definition and evaluation of customised gesture sets and algorithms.
Tifad is a framework to deal with Natural Gas (NG) dispatching for thermoelectrical generation networks. Project blog can be browsed here: https://tifadframework.wordpress.com/
SWARD (System for Weapon Allocation Research and Development) is a testbed for benchmarking weapon allocation algorithms against each other. It is intended for researchers within operations research, information fusion, and related areas.