Showing 1022 open source projects for "analysis"

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  • 1
    JAS-mine

    JAS-mine

    Toolkit for agent-based & dynamic microsimulation modelling

    ...In addition, the platform provides standard tools which are frequently used both in agent-based modelling and dynamic microsimulations, like design of experiments (DOE), run-time monitoring and visualization with plots and graphs (GUI), I/O communication and statistical analysis. JAS-mine source code can be found on GitHub, with the core repository at: https://github.com/jasmineRepo/JAS-mine-core and the GUI repository at: https://github.com/jasmineRepo/JAS-mine-gui
    Downloads: 7 This Week
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  • 2
    Zocalo Prediction Markets
    Zocalo is a toolkit for building Prediction Markets, markets in securities that pay out depending on outcomes of future events. A prediction market can provide estimates of the likelihood of specific outcomes that are more reliable than other sources of
    Downloads: 0 This Week
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  • 3
    Jam--Nuclear Physics Data Acquisition

    Jam--Nuclear Physics Data Acquisition

    Java-based nuclear physics data acquisition.

    This project now lives at https://github.com/dwvisser/jam-daq-code/ Jam is an easy-to-use self-contained data acquisition and analysis system for VME-based (or CAMAC-based) nuclear physics experiments. Jam has an easy, standard GUI for taking and sorting multi-parameter event-based data into 1-d and 2-d histograms.
    Downloads: 7 This Week
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  • 4
    CompleXChange

    CompleXChange

    differential analysis of combinatorial protein complexes

    The increasing wealth of transcriptomic data and current computational tools enable to infer how protein interactomes and complexomes may be assembled in specific samples. With CompleXChange this information can be exploited to conduct differential analyses of the dynamic protein complexome in a quantitative manner. The corresponding publication can be found on https://doi.org/10.1186/s12859-019-2852-z.
    Downloads: 0 This Week
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  • 5

    MarDRe

    MapReduce-based tool to remove duplicate DNA reads

    MarDRe is a de novo MapReduce-based parallel tool to remove duplicate and near-duplicate DNA reads through the clustering of single-end and paired-end sequences from FASTQ/FASTA datasets. This tool allows bioinformatics to avoid the analysis of not necessary reads, reducing the time of subsequent procedures with the dataset. MarDRe is the Big Data counterpart of ParDRe (link above), which employs HPC technologies (i.e., hybrid MPI/multithreading) to reduce runtime on multicore systems. Instead, MarDRe takes advantage of the MapReduce programming model to significantly improve ParDRe performance on distributed systems, especially on cloud-based infrastructures. ...
    Downloads: 0 This Week
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  • 6

    TEESer

    Tool for Engineering Emergent Selforganizing bEhavioR

    Teeser is a java-based integration framework for engineering emergent self-organizing behavior in distributed systems. It contains tools for analysis, tuning, macroscopic probing and simulations of distributed systems. Library of tools can be extended and everybody is encouraged to provide and share its tools with the community. The main idea is to provide application designers ability to seamlessly use tools which are helpful to design self-organizing behavior. Designers can continue to use their domain tools such as favorable simulator and by pluging it into the framework can take advantage of distributed simulations in the grid, various analyzers, optimizers (particle swarm optimization, genetic algorithms, ...). ...
    Downloads: 0 This Week
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  • 7

    Ghawwas_V4

    An open source system for Arabic corpora processing

    Ghawwas (previously known as Khawas) is an open source system for Arabic corpora processing. Ghawwas V4.0 provides the following main functions: a. Frequency list for single word and N-Grams b. Concordance c. Collocation (MI, CHI Squared, LL, T-Score, Z Score, Dice, Log Dice, Weirdness Coefficient) d. Lexical patterns search e. Two corpora frequency profile comparison based on MI, CHI, LL, T-Score, Z Score, Dice, Log Dice, Weirdness Coefficient f. Accept Windows and UTF-8 character...
    Downloads: 9 This Week
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  • 8
    X-RIME is a open source project devoted to provide Hadoop based solution for large scale social network analysis.
    Downloads: 0 This Week
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  • 9
    Effectopedia
    Effectopedia is open knowledge aggregation and collaboration tool that provides a means of describing adverse outcome pathways in encyclopedic manner.
    Downloads: 0 This Week
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  • 10
    Active Intelligence Server

    Active Intelligence Server

    Reporting, Dashboarding, Analytic, Self-service BI, Ad-hoc reporting

    Active Intelligence Server 2 (AIS) is a data visualization tool and fully featured reporting server which enable users from open source community to host any reports created using BIRT, Jasper and Pentaho community edition allowing organization to leverage open source technologies and enable them to use AIS as a reporting server to deploy their existing and new reports seamlessly onto AIS for secure sharing the information in different file formats and schedule to make system automation and...
    Downloads: 0 This Week
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  • 11
    RadiationHelper

    RadiationHelper

    Alpha, Beta, Gamma measurements and Nuclide exposure

    RadiationHelper is a data analysis tool for : 1. gross alpha and beta radiation measurement and detector calibration using experimental data (counts acquired by alpha-beta devices). 2. gamma spectroscopy measurements and detector calibration using experimental data (spectra acquired by acquisition software such as Assayer, Gamma Vision, Maestro) 3. gross alpha,beta, gamma detector efficiencies and gamma peak efficiency can be theoretical computed using Monte-Carlo simulation technique for radiation transport (based on EGSnrc toolkit) 4.dose assessment in human body exposed to radiations from nuclides in several common scenarios such as air exposure, water submersion, ground surface, internal ingestion or inhalation. 5. quick dosimetry and shielding computations. ...
    Downloads: 0 This Week
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  • 12

    The Sceptics Global Warming Analyzer

    Data Analyzer for Global Warming Sceptics

    A basic tool for importing, parsing, exporting, and analyzing the GHCN Weather Station Data.
    Downloads: 0 This Week
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  • 13
    OptFlux
    OptFlux is an open-source and modular software aimed at being the reference computational application in the field. It is the first tool to incorporate strain optimization tasks, i.e., the identification of Metabolic Engineering targets.
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    Downloads: 54 This Week
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  • 14
    Universal Tag Finder

    Universal Tag Finder

    Is tool for query HTML content

    Universal Tag Finder is a tool to query against html content in the file system. For developers it allows to find out relevant elements during the troubleshooting and validating periods. Does not need to bother on massive regex to find out elements.
    Downloads: 0 This Week
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  • 15

    ProMoVis

    A Tool for Control Structure Selection in Interconnected Processes

    ...The tool s implemented as either a standalone software for industrial use or as a research version which can run within Matlab, both released under the Apache Open Source license. ProMoVis is not limited to the control structure selection problem as additional analysis methods can be added easily. For the re-use of existing models a Modelica interface is under development. If you want to refer to ProMoVis in a publication, please use the following: "Wolfgang Birk, Miguel Castaño, Andreas Johansson, An application software for visualization and control configuration selection of interconnected processes, Control Engineering Practice, Volume 26, May 2014, Pages 188-200."
    Downloads: 0 This Week
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  • 16
    AcMus is a project on musical acoustics devoted to the development of models and computer tools for the study of room acoustics and focus on helping the investigation of issues related to the design, control and acoustic treatment of environments. AcMus has not been maintained for a few years now, but the code may still be useful. We consider the current repository to be at https://gitlab.com/ccsl-usp/acmus .
    Downloads: 0 This Week
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  • 17
    gvSIG CE (Community Edition)

    gvSIG CE (Community Edition)

    The full-featured, easy-to-use desktop GIS with real processing power!

    The Community Edition (gvSIG CE) is a fork of the gvSIG desktop GIS project (http://www.gvsig.org). It is open to external contributors and fully community-driven. Our official releases are designed to be portable and include all necessary binaries for Linux, Mac OS X and Windows. No installation necessary: Just download, unpack and run!
    Downloads: 2 This Week
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  • 18
    Viwks

    Viwks

    An application to download information on websites periodically.

    An application to download information on websites periodically. First you create a new 'task', then you select the URL and click on the 'load page' button, after you close the new window you can rename the task, choose the interval, choose the tag and so on, after that you click 'save'. Back at the main menu you can select the 'task' you want, select an output folder and hit 'run'. It's that simple.
    Downloads: 0 This Week
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  • 19
    FlexibleParser_Java

    FlexibleParser_Java

    Group of multi-purpose Java-converted-from-C# parsing libraries.

    FlexibleParser (Java) is currently formed by the following independent libraries/parts: - UnitParser. It allows to easily deal with a wide variety of situations involving units of measurement. - NumberParser. It provides a common framework for all the .NET numeric types. AUTHORSHIP & COPYRIGHT I, Alvaro Carballo Garcia (varocarbas), am the sole author of each single bit of this code. All the contents of this repository can be considered public domain. For more information about my...
    Downloads: 0 This Week
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  • 20
    A shell for using the methods of Contextual Logic to do qualitative data analysis, mathematical research on the theory underlying Conceptual Knowledge Processing, or learning Formal Concept Analysis. It uses the framework provided by the Tockit project..
    Downloads: 0 This Week
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  • 21
    The main purpose of CombiTagger is to read files generated by individual PoS taggers and use them to develop and evaluate combined taggers according to a given combination algorithm. http://aaai.org/ocs/index.php/FLAIRS/2009/paper/download/67/296
    Downloads: 0 This Week
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  • 22
    Astronomy CCD Calculator

    Astronomy CCD Calculator

    Plan and preview your astronomical shots

    A handy tool designed to help beginner Astronomers. The software Astronomy CCD Calculator uses NASA/SkyView survey resource which provides CCD images of the night sky.It helps you plan an observation by letting you play with different instruments resulting various "Fields Of View" so you can see what your camera will capture and choose the best target for the session.
    Downloads: 0 This Week
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  • 23
    CamShaft
    Calculation of camshafts - allows to define a camshaft profile on the set trajectory which should provide the given mechanism. The trajectory can be set graphically, co-ordinates or function.
    Downloads: 7 This Week
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  • 24
    FilteredPush
    Network software for annotation and quality control of distributed data. Supported by NSF: DBI 0646266 and NSF: DBI 0960535. http://wiki.filteredpush.org
    Downloads: 0 This Week
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  • 25

    BisSNP

    Bisulfite-seq/NOMe-seq SNPs & cytosine methylation caller

    Now in Github: https://github.com/dnaase/Bis-tools/tree/master/Bis-SNP BisSNP is a package based on the Genome Analysis Toolkit (GATK) map-reduce framework for genotyping in bisulfite treated massively parallel sequencing (Bisulfite-seq, NOMe-seq and RRBS) on Illumina platform. It uses bayesian inference with either manually specified or automatically estimated methylation probabilities of different cytosine context(not only CpG, CHH, CHG in Bisulfite-seq, but also GCH et.al. in other bisulfite treated sequencing) to determine genotypes and methylation levels simultaneously. ...
    Downloads: 1 This Week
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