Search Results for "gnu/linux" - Page 29
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Showing 4673 open source projects for "gnu/linux"
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The JTS Topology Suite is an API for modelling and manipulating 2-dimensional linear geometry. It provides numerous geometric predicates and functions. JTS conforms to the Simple Features Specification for SQL published by the Open GIS Consortium.
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Java implementation of John Platt's Sequential Minimal optimization algorithm. This is an efficent Support Vector Machine solution.
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CRAFT HPC Floating-point Analysis
CRAFT: Configurable Runtime Analysis for Floating-point Tuning
CRAFT (Configurable Runtime Analysis for Floating-point Tuning) for HPC (High-Performance Computing) uses binary instrumentation to perform runtime analysis of floating-point code, detecting cancellations and making precision level recommendations. NOTE: THIS PROJECT HAS MOVED TO GITHUB!!!! https://github.com/crafthpc/craft -
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OpenOrienteering
Former project page
See https://www.openorienteering.org/apps/mapper/ -
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GMOD is a set of interoperable open source software components for visualizing, annotating, and managing biological data. See http://gmod.org for more.
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Notice: RMG-Java is no longer in active development. Please find the latest version written in Python at http://reactionmechanismgenerator.github.io To see the website o the old Java version of RMG, visit http://rmg.sourceforge.net RMG (Java version) is an automatic chemical reaction mechanism generator that constructs kinetic models composed of elementary chemical reaction steps using a general understanding of how molecules react (currently limited to C, H, O, and S atoms).
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Lucon
Lucene based concordancer
Lucon is a user friendly graphical concordancer. It runs on UTF-8 text and xml files and it allows to search for a sole word, for terms, for words at a certain distance and it displays the contexts of the searched terms. -
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***** Discontinued (direct part of NetLogo now (since NL v6)!) ***** This extension connects the simulation platform NetLogo with the statistical analysis software R. It adds some new primitives to NetLogo, which offers the interchange of data with R and the call of R functions from NetLogo. See the documentation for more details. There is also the possiblity to open an Interactive R Shell from NetLogo. _______________________________________ Please have also a look on our info...
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came
Identification of chromatin accessibility from NOMe-seq
Chromatin accessibility plays a key role in epigenetic regulation of gene activation and silencing. Open chromatin regions allow regulatory elements such as transcription factors and polymerases to bind for gene expression while closed chromatin regions prevent the activity of transcriptional machinery. Recently, nucleosome occupancy and methylome sequencing (NOMe-seq) has been developed for simultaneously profiling of chromatin accessibility and DNA methylation on single molecules. However,... -
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MorphoLim
MorphoLim : identifying city boundaries
MorphoLim has been moved to sourcesup (https://sourcesup.renater.fr/morpholim/). MorphoLim is dedicated to the identification of the morphological boundary of urban agglomerations. The method used avoids the need for any pre-defined maximum distance threshold between buildings. It is based on the conceptual and methodological tools of fractal geometry. Authors of the application: Cécile Tannier, Gilles Vuidel, and Pierre Frankhauser (ThéMA, Besançon, France) -
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The Tolven platform and ePHR and eCHR applications enable interoperability across electronic health records for consumers and clinicians. Using Java, EJB3, Faces, Facelets, AJAX, relational database, and LDAP for security.
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JMapViewer
Java Swing component for integrating OSM maps into your Java app.
This project offers the Mavenized format of the official "JMapViewer" project. Official project code on: https://trac.openstreetmap.org/browser/subversion/applications/viewer/jmapviewer?order=name Please, note that no development is performed in this SVN, just contains Maven artifact of official releases (starting from 1.14 version) If you want to give it a try, download code and run the Demo: > mvn compile package > cd target > java -jar JMapViewer-1.14.1-Demo.jar -
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OpenSeaMap's goal is to add nautical and tourism information a sailor could be interested in to OSM (OpenStreetMap) and to present it in a pleasing way. Those include beacons, buoys and other seamark and port information.
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openModeller is a complete C++ framework for species potential distribution modelling. The project also includes a graphical user interface, a web service interface and an API for Python.
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Collaborative infrastructure for Collaborative Product Development (manufacturing) within Extended and Virtual Enterprise.
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XR3FoodAnalyser
Analyze food ingredients!
Comments: Confirm that the food you eat is health with this app.Including over 5000 ingredients!!! System Requirements: Java 1.8.0_45++ required. -
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JUMP Database Query Plugin
DB Query Plugin for OpenJump
The JUMP DB Query Plugin is an extension for the OpenJUMP GIS platform that allows OpenJUMP users to give arbitrary database queries to retrieve and display geographic feature sets. Spatial databases currently supported are PostGIS, Oracle Spatial, MySQL, and SpatiaLite. -
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Open XAL
Accelerator Physics Framework
Open XAL is an open source development environment used for creating accelerator physics applications, scripts and services. This project is a collaboration among SNS, CSNS, ESS, GANIL, TRIUMF and FRIB. -
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physicsmata
API for all possible cellular automata that work same at all angles
Its strange how the "sorted pointers" normalizing makes just about any random function, as long as it connects the inputs to the outputs on some path, vibrate as some nonlinear shape of wave. This could be used as a game interface for evolvable musical instruments or fluid puzzle games. Physicsmata is similar in effect to SmoothLife but simpler and pure Java. The cellular automata API takes a function to run at each point. Its parameters are sums of screen brightness (n color dimensions are... -
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SyMAT
Old SyMAT releases
This is an archive of old releases of SyMAT. The latest version is found at the official website. -
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Systems Biology Simulation Core Library
Accurate and efficient Java library that simulates biological models
This project has been moved to https://github.com/draeger-lab/SBSCL. -
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MyOscar is a personal health record system. This project contains both the data storage server as well as a client / patient UI for accessing the data. Other data access clients can be / have been written, the Oscar EMR is one such client. The sourceforge myoscar-users@lists.sourceforge.net is the main mail list and form of communications for this project. The sourceforge Tickets system is the bug and feature tracker for this project. The sourceforge git repository is not the...
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Eviewbox is a java imaging suite, its purpose is to view and spread native DICOM medical images and allowing for 2D reconstructions. EViewbox applet will allow to see the DICOM images on every platform.
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JEXTools
Java software/gui for databasing/batch processing experimental data
This is the official binary download site. The official site for bug tracking and the code repository is at www.github.com/jaywarrick/JEX -
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An efficient Java-based Multi-agent Platform implementing the micro-agent concept µ² offering network support and multiple agent implementation languages. Detailed instructions and documentation can be found under http://www.micro-agents.net. This project has been moved to Github.
