Search Results for "wiki" - Page 2
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Showing 67 open source projects for "wiki"
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PMM-Lab
Predictive Microbial Modeling plug-in for KNIME
...PMM-Lab has been initiated and provided by the Federal Institute for Risk Assessment - BfR (Berlin, Germany). The software is in Beta status. Before using the software you have to read and accept the license and disclaimer (https://sourceforge.net/p/pmmlab/wiki/Disclaimer/). If you do not agree, do not use this software. -
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Data2FCS
Data2FCS is a simple tool to convert text data files to FCS3.1 data.
...A special treat is the possibility to transform categorical data into numerical data. The resulting FCS data file can be analysed in regular flow cytometry softwares, such as the open source FCSaylzer. For more info, take a look at the Wiki. Data2FCS needs Java 1.7 or higher to run. -
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Ship Lock Scheduling
Scheduling lockages at ship locks with several parallel lock chambers
...Some tools for estimating the quality of calculated solutions will be further improved. Initially the software was developed within a project of TU Berlin regarding the Kiel Canal. See project wiki for conditions that should be met by applications. -
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DCMLinux - Dicom Linux Distribution
Dicom PACS solution for free.
...Just download the iso, burn it to a CD and boot it up. No need to configure any files of dcm4chee, DCMLinux installer asks for everything it needs to configure a running PACS in minutes. Project Wiki : http://wiki.dcmlinux.org Project Forums: http://forums.dcmlinux.org -
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Bamformatics
Toolkit and GUI for sequencing data analysis
...Its toolkit includes, among others, programs to identify variants and to compute various types genomic tracks. It also provides a graphical user interface to facilitate general bioinformatic workflows. The project wiki contains further details. -
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GeneticThesaurus
Annotation of genetic variants in repetitive regions
GeneticThesaurus enables analysis of genetic variation in repetitive regions. See project wiki for details. -
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SoNIA (Social Network Image Animator)
Social Network Image Animator creates animations of network data
SoNIA (Social Network Image Animator) is a Java-based package for visualizing dynamic or longitudinal network data and rendering it out as animations. The home page with examples is located at http://sonia.stanford.edu Documentation is at https://sourceforge.net/p/sonia/wiki/Main_Page/ -
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TUIT
Taxonomic Unit Identification Tool
For the installation instructions please see Wiki page: https://sourceforge.net/p/tuit/wiki/ IMPORTANT: since version 1.0.4.0 TUIT allows to select RDP-like formatted output to improve out of the box compatability with tools, that assume RDP-formatted input. A new field has been added to the properties.xml, please make sure to update it to contain <OutputFormat format="tuit"/> or <OutputFormat format="rdp"/> in the <BLASTNParameters> section. -
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Bibtex Import
Imports bibtex references from MathSciNet
Uses MathSciNet to search for bibtex references. The matching references can then be edited and added to a local file. For information on how to use this software please consult the wiki. Requires a MathSciNet subscription. -
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Energistics Transfer Protocol
Real-time Low Latency High-Frequency data streaming API
This project contains the working artifacts for the development of the Energistics Transfer Protocol. There is NO Wiki. To review documentation, clone or download the repository and look in the documentation directory. You can access on line using the [Browse Code] button. -
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VarImpact
Extracting effects of mutations on molecular properties from text.
...This allows to annotate sequencing results with observed impacts, gather information about the mutational landscape observed in disease populations, and to study disease mechanisms. Check our Wiki for more! -
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TriageTools
Tools for partitioning and prioritizing fastq data
TriageTools is a collection of tools for partitioning raw data (fastq reads) from high-throughput sequencing projects. The tools are designed for basic data management as well for prioritizing analysis of certain subsets. The project wiki contains usage information. -
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Handwritten Signature SDK
Java SDK useful to develop handwritten signature verification app
Handwritten Signature SDK supports: dynamic time wrapping (DTW), extended regression (ER), signature sampling, direction hash and features extraction: see wiki for more info. -
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OpenME Interface
simple event-based plugin interface to open up hardwired software
News: since 2015 we continue all related developments within Collective Knowledge Framework: http://github.com/ctuning/ck/wiki Simple and universal event-based plugin framework and interface to open up hardwared black-box software (tools, application), make them interactive through external plugins, and connect them with other higher-level tools such as Collective Mind. For example, it is used to open up compilers (GCC, LLVM, Open64) for external tuning of optimization of internal heuristics, or to open up applications for online tuning and adaptation particularly on heterogeneous systems. ... -
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LQFB-analyser
A lqfb delegation analyser. A 3d directed weighted multi graph.
A rich client to analyse data from a liquid-feedback (http://liquidfeedback.org/) instance, for now it's a 3d graph explorer to inspect the delegations. It's an application based on the eclipse platform (indigo). To be precise its a directed weighted multi graph browser in 3d. Find out more in the wiki https://sourceforge.net/p/lqfbanalyser/wiki/Home/ . Generated reports https://sourceforge.net/p/lqfbanalyser/wiki/generated%20lqfb%20reports/ . -
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The Environment State Virtual Sensors for Android is a library that allows recognition of environmental scenarios in which an Android device can be found. The basic scenarios types are: Motion states, Noise states, Proximity state, ringer-mode state.
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ECG2HRV
import and store ECG, associate to clinical data, automatic HRV
...It also performs automatic QRS complex detection and RR interval classification showing the output in a visual chart that the user can edit to correct sources with artifacts or pats with bad detections. This project was developed using Netbeans 7.3 IDE. For further questions or feature requests please contact me at mamenarguez@ou.edu Please read wiki for initial setup -
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PARSEC - PAtteRn SEarch / Context
PARSEC - PAtteRn SEarch and Contextualization
...PARSEC represents an intuitive, modular (easily extensible) and all-in-one solution for the efficient integration of lots of diverse genomic information in order to perform nonlinear localization and characterization of biological sites in a user-friendly environment. See the wiki for hardware requirements and supported browsers. -
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SeqWare has moved to GitHub, see https://github.com/SeqWare SeqWare is a project to create a tool set to work with next generation genome sequencers (SOLiD & Illumina). It includes a LIMS, Pipeline, and Query Engine. Check out the wiki link below to see documentation. You can get the source from the Develop link.
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Multilingual Content Synchronization with Wikis: CoSyne is a Research and Technological Development project co-funded by the European Union. Details: http://cosyne.eu
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OGEMA allows software applications aiming at energy management and energy efficiency to be executed on an embedded computer (the Gateway) connected to building automation systems. OGEMA wiki https://www.ogema-source.net/wiki/
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Java Dynamic Component Framework
This is a lightweight java dynamic component framework
...The components are pure Java classes file using a pure Java middleware. Each component may be packaged in a jar or several related components may be packaged together. Component migration over the network is planned. Go to the Wiki to have an overview. -
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locsmoc
piecewise polynomial curves for genomic signals
Locsmoc produces piecewise polynomial models for one-dimensional signals of the type encountered in genomics. The project wiki contains an overview of the tool and usage examples. -
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WindTunnel
A 3D wind tunnel simulator created in 2008 by a group of undergrads
A 3D wind tunnel simulator created in 2008 by a group of COMP314 students at The University of Waikato. The user is able to insert objects into the windtunnel and view a (very) rough simulation of the wind flowing around it. View the Wiki for detailed instructions on how to use it. Created by: Sam Sarjant, Kias Hafiz, David Spooner, Sam McIntosh, Kieran Ryan, Yong Chun Fu -
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Java Decision Diagram Libraries (BDD)
Java Decision Diagrams (BDD) libraries: JDD and JBDD
This project has been moved to bitbucket.org: - https://bitbucket.org/vahidi/jbdd/wiki/Home - https://bitbucket.org/vahidi/jdd/wiki/Home It includes two libraries for working with decision diagrams: - JBDD: a Java interface to two popular BDD libraries, CUDD and BuDDy - JDD: a native Java library supporting BDD, Z-BDD
