Showing 870 open source projects for "can"

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  • 1
    Ferox

    Ferox

    Ferox - Sequence Alignment with Fuzzy K-mers

    Ferox is a DNA sequence alignment application that uses fuzzy k-mers to quickly and accurately align sets of sequence reads against a reference genome. Ferox can also be used to align whole genomes. The seeding mechanism used by Ferox is highly configurable, allowing custom fuzzy seeds to be created declaratively in an XML configuration file.
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  • 2
    JOSM plug-in for importing of map data from Cadastral portal of Slovak Republic. Vector data can used for corrections of Openstreetmap for Slovakia.
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  • 3
    Geosearch

    Geosearch

    Allows you to monitor the movement of users on a Google map.

    Geosearch is a free/open source program to monitor the movement of users on a Google map. You can send SMS, make calls and find the optimal road to reach another user. Geosearch is an Android 4.0 application (API level 14).
    Downloads: 0 This Week
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  • 4

    Black Hole Cortex

    Sphere surface layers of visual cortex approach maximum info density

    ...SphereSurfaces outside it recursively have more neurons, more surface area, but less density since it has to eventually dimension-reduce to high level ideas, like there are 10000 Wikipedia page names that cover most parts of the world. We can think of Wikipedia as a layer above our brains, a global SphereSurface of large surface area (a cortex layered on billions of minds) and small (10000 most important pages) density.
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  • 5
    MoonPlanner

    MoonPlanner

    Moon calendar: shows moon's phase, signs and relatives plant's part

    MoonPlanner is a Java calendar that allow to view moon's phases, moon's signs (constellations in which the moon is), and show the part of the plant corresponding to each sign (flower, fruit, leaf or root). For every calendar's day the user can attach notes (that are stored in a persistent database). At the startup the program will remind you if there will be notes for current day. Timezones and localizations (En, IT) are supported by the application. This calendar is usable between 1900 and 2020. This tool can be useful to plan gardening tasks or to view some astrology informations. ...
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  • 6
    CUO

    CUO

    Codon Usage Optimizer

    ...The main function of the software at the current development stage is to optimize genes to be transformed into the Chlamydomonas reinhardtii chloroplast genome although it can be used to optimize genes into other hosts as well. The main tool in CUO, Moptimizer, introduces a semi-automatic way of gene optimization which provides more flexibility and accuracy during the optimization process. The future plan for CUO is to be developed into a multipurpose bioinformatics software where data, findings, planning and learning in biology labs can be created and shared at finger tips.
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  • 7

    Convert GPS-Tracks to KML

    Convert GPS-Tracks user-saved tracks to KML files for Google Earth.

    Convert user-saved tracks from GPS-Tracks for iPhone to KML files for Google Earth. The GPS-Tracks iPhone application is available from the App Store or from http://www.gps-tracks.com . It can save recorded GPS tracks to the iPhone storage. This little Java applet provides the functionality to convert these saved tracks to KML files, for use with Google earth. Under Windows, it uses the synced files from the iTunes phone files backup, and extracts the tracks from there. Under Linux, it uses the virtual file system provided by libgpod (which provides an iPhone-gvfs-bridge) and gvfs-fuse (which offers gvfs virtual filesystems as Linux FUSE filesystems). ...
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  • 8
    ImageJforXTF

    ImageJforXTF

    Open source software for processing XTF files

    ...ImageJforXTF extends the open source ImageJ software with functionalities that allow to open and manage XTF files. This kind of files is used to record sonar and bathymetric data. An user can choose to open any file with extension ".xtf" so that the program parses it and shows the resulting image. Then the user can resize the image, apply graphic filters, perform measurements and georeference the recorded data using GoogleMap and GoogleEarth, in addition to using the basic functionality offered by ImageJ.
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  • 9

    TextComparer

    Small Java program to compare two texts

    Small Java program to compare two texts, originally designed to be used to find quotations in a Byzantine anthology. It can quite likely be used to detect plagiarism between two texts as well Graphical interface which allows easy navigation between corresponding parts in the two different texts. Uses the http://software.jessies.org/salma-hayek/ Java TextArea for this. Probably very much can be done to improve this program and the algorithm which it uses.
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  • 10

    blutle

    Small wireless board to control tiny DIY toys over bluetooth

    Being powered with cell phone battery, this board can drive small toys - up to two DC motors, several input/output pins, discharge control.
    Downloads: 0 This Week
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  • 11
    ipmems

    ipmems

    Real-time data acquisition and visualization software

    Cross-platform data acquisition and visualization software with an embedded HTTP-server, binary protocol parsing library, protocol emulation server, remote secure administration server, embedded Groovy scripting facilities and HMI (SCADA) visualization module.
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  • 12

    QuartzCrystal

    Electric Behaviour of Crystals and Pierce Crystal Oscillators

    The Java applet QuartzCrystal shows the frequency response of quartz crystals and Pierce crystal oscillators. Crystal parameters can be freely choosen. Display is spectrum analyzer-like and shows the amplitude/phase and/or a Nyquist diagram. Crystals can be series resonant or with load capacitance. Adding of spurious resonances is possible.
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  • 13
    ezBioNet is a biological modeling and simulation tool of molecular interaction that occurred in a cell. We aim that this software can be used for collecting biological data and making biological models to simulate it by biological researchers. ezBioNet can build a detailed biological model including signal transduction, enzyme kinetics, expression network, etc. It also support number of numerical analysis method to simulate the biological reaction networks.
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  • 14
    Numeric Base Calculator

    Numeric Base Calculator

    Numeric base conversion & arithmatic operations

    'Numeric Base Calculator' is a console application developed in java.It allows you to do conversitions and simple arithmatic operations involving the most commonly used bases like 2,4,8,10 & 16.You can convert a digit from one base to another.You can perform arithmatic operations like addition,substraction,multipication & division using those bases.This is a handy tool for you to check or do your homework!
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  • 15
    Audivolv

    Audivolv

    Artificial intelligence evolves musical instruments played with mouse

    Artificial Intelligence (AI) evolves musical instruments you play with the mouse from small blocks of Java code that operate on numbers, each block designed to keep all numbers in range -1 to 1 if they started in that range, and combinations of these evolved codes running 44100 times per second for high quality 44.1 khz audio. You can also write the Java code into its window. Uses Javassist internal compiler on the new Java code assembled by renaming variables to overlap eachother and reordering, copying, and removing blocks of code. Listen to the recorded music in files section of sourceforge or try it for yourself. This branched into my other projects: GigaLineCompile, JSelfModify, JSoundCard, and Human AI Net as I got more into the AI and systems side of things and explored vision research as a better user interface to network minds together through the Internet. ...
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  • 16
    A very simple command line tool to convert OSM files to Shapefiles. Written in Java. Think of it as a self-study project.
    Downloads: 1 This Week
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  • 17
    Analysis

    Analysis

    Application to creating charts.

    ...It allows you to create your plugins or customize Analysis application (by changing installed plugins in application). The Application, thanks to JAVA technology, is portable on the most operating system. In Files page you can find the application and also patches to its.
    Downloads: 2 This Week
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  • 18
    EyeMap - Eye Movement Data Analyzer
    EyeMap is a visualization and analysis tool for text reading eye movement data. It can process Unicode, proportion/non-proportion and spaced/unspaced reading materials, which supports various languages and experiment methods.
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  • 19

    iPiG

    Integrating PSMs into Genome browser visualisations

    iPiG targets the integration of peptide spectrum matches (PSMs) from mass spectrometry (MS) peptide identifications into genomic visualisations provided by genome browser such as the UCSC genome browser (http://genome.ucsc.edu/). iPiG takes PSMs from the MS standard format mzIdentML (*.mzid) or in text format and provides results in genome track formats (BED and GFF3 files), which can be easily imported into genome browsers. For more details about iPiG and it's functionallity, please see "iPiG: Integrating Peptide Spectrum Matches Into Genome Browser Visualizations" Mathias Kuhring and Bernhard Y. Renard (http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0050246)
    Downloads: 0 This Week
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  • 20
    iTLogger

    iTLogger

    Log and evaluate data from your smartphone and OBD

    ...Its aim was to create an app and corresponding desktop programm, so that people could track their journey on forest roads and later evaluate the data on their desktop. With the logged data you can evaluate the quality of forest roads. Available on Google Play: https://play.google.com/store/apps/details?id=de.tui.itlogger
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  • 21

    Linking Yabi with RDA

    This software system enables publication of YABI workflows to the RDA.

    ...This website provides access to the workflows and datasets that have been made public. By login in, scientist can edit, manage and publish their collection descriptions to the Research Data Australia.
    Downloads: 0 This Week
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  • 22
    Tux Resistor

    Tux Resistor

    Electronics Tool to interpret Resistor Color Codes and viceversa.

    Tux Resistor is an Interactive Electronics Tool which can be used to convert Resistor color bands to Resistor values and vice versa.
    Downloads: 0 This Week
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  • 23

    samsn

    A tool to handle multi-stage mass spectrometry data

    The source code for SAMSN can be found in github at https://github.com/miquelrojascherto/samsn
    Downloads: 0 This Week
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  • 24
    PetriNetExec: Java Embeddable Petri Nets

    PetriNetExec: Java Embeddable Petri Nets

    PetriNetExec a library for embedding Petri Nets into Java applications

    .... * PetriNetExec is embeddable into your Java application. This means that you can build your own application and add Petri Nets into it. * PetriNetExec is open-source.
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  • 25

    jPeriodic

    jPeriodic is a table of elements written in Java

    ...Additionaly jPeriodic offers a small temperature converter which is able to convert between Celcius and Kelvin. Because jPeriodic is coded in Java the software is platform-independent, meaning you can run jPeriodic on Windows, Mac OS, Linux and many other operating systems which are able to run a Java Virtual Machine.
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