Showing 1773 open source projects for "graphical user interface"

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  • 1
    metawatt

    metawatt

    Binner for assembled metagenomes

    The Metawatt binner is a graphical binning tool that makes use of multivariate statistics of tetranucleotide frequencies and differential coverage based binning. It also performs taxonomic assessment of binning quality (via diamond BLASTx). Created bins can be edited and exported as fasta. The Metawatt is implemented in Java SWING and minimally depends on Diamond, HMMer3.1, BBMap, Prodigal and the Batik library for the export of SVG graphics. Citation: Strous M, Kraft B, Bisdorf R,...
    Downloads: 0 This Week
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  • 2

    Virtual Cell

    Former home of the Virtual Cell platform (VCell), see http://vcell.org

    This project and all source code has moved to GitHub, see https://github.com/virtualcell
    Downloads: 0 This Week
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  • 3
    An open source workbench for chemo- and bioinformatics built on the Eclipse Rich Client Platform (RCP).
    Downloads: 2 This Week
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  • 4
    Maltcms
    The Maltcms - Modular Application Toolkit for Chromatography Mass-Spectrometry is a JAVA API for preprocessing, alignment, analysis and visualization of data stored in open file formats used in Proteomics and Metabolomics research.
    Downloads: 0 This Week
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  • 5

    Discriminative Language Editor

    Discriminative language editor based on ontologies

    Text editor in Java that is able to detect discriminative expressions while the user is typing. When the internal ontology-based analyzer detects a potential discriminative expression the user is advised by underscoring the related words in the text. A descriptive message about the issue is also shown to the user when the cursor is placed over the potential discriminative expression.
    Downloads: 0 This Week
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  • 6
    Scommunication

    Scommunication

    Scommunication is easy to use rs232 rs485 communication application

    Scommunication is easy to use rs232 rs485, USB to serial communication application. All sent and coming data you can see ASCII HEX DECIMAL or BINARY. With timer -- timer add after version 2-- you can send data every second , half second or how you want This application written in java(fx) so you can use windows linux or mac. Tested with arduino uno,arduino nano, arduino mega, frdm-kl46z and frdm-k64f In some problem feel free to send me mail: hrasity@hotmail.com
    Downloads: 0 This Week
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  • 7
    INDI for Java

    INDI for Java

    INDI astronomical device control library for Java

    A Java library implementing the INDI distributed control protocol (http://indilib.org). Designed to easily implement new INDI Clients (graphical and not graphical ones), INDI Drivers and INDI Servers. We have started a complete overall of the project with many more drivers the staging site with the current development state can be found here http://indiforjava.sourceforge.net/stage/
    Downloads: 0 This Week
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  • 8
    Priority Estimation Tool (AHP)

    Priority Estimation Tool (AHP)

    PriEsT is a decision making tool for Analytic Hierarchy Process (AHP).

    Priorty Estimation Tool (PriEsT) is a decision analysis tool. You can use it for ranking the options you have, or alternatively, you may use it for resource allocation (budgeting) problems. In PriEsT, you enter a list of available options and then define your criteria for prioritization. After defining criteria, PriEsT allows you to enter your judgements against each criterion, which are then used to calculate the final ranking (or weights). Please cite this if you find it...
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    Downloads: 5 This Week
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  • 9
    Repast

    Repast

    The Repast Suite is a family of free agent-based modeling libraries.

    The Repast Suite is a family of advanced, free, and open source agent-based modeling and simulation platforms that have been under continuous development for over 20 years. Current source code and releases are hosted on Github https://repast.github.io/
    Downloads: 1 This Week
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  • 10
    Entrainer
    Entrainer is a Java program (JRE 1.8.0_40+ required, available from http://java.sun.com/javase/downloads/index.jsp) which creates binaural beat frequencies with sound, light and animations for the purpose of entraining one's brain waves.
    Downloads: 3 This Week
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  • 11
    SMT: SAR Management Toolkit

    SMT: SAR Management Toolkit

    Application for managing land searches for missing persons.

    Experimental application for assisting in the management of land searches for missing persons. Incorporates OpenJump for GIS rendering of segments, establishing intitial POA values for segments through consensus or mixed consensus and statistical distances, POS and POA recalculation based on PODs from applied resources, and task assignments suggested by missing person behavior profiles.
    Downloads: 0 This Week
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  • 12
    PANTHER project: software for modeling of protein sequence and function evolution, and tools for applying these data to the analysis of genome data, expression data and coding SNPs. Details available at http://www.pantherdb.org.
    Downloads: 2 This Week
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  • 13
    Astro And Calc

    Astro And Calc

    Calculate Astronomical Data

    Berechnung astronomischer Erscheinungen.
    Downloads: 0 This Week
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  • 14

    GFinisher

    genome assembler finisher, gap, gap close, sort contig

    GFinisher is an application tools for refinement and finalization of prokaryotic genomes assemblies using the bias of GC Skew to identify assembly errors and organizes the contigs/scaffolds with genomes references. contact dievalg at gmail.com
    Downloads: 0 This Week
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  • 15

    alkacalc

    Lye calculator for soapmaking

    AlkaCalc assists with the creation of soap recipes for either liquid (potassium hydroxide) or bar (sodium hydroxide) soaps by calculating the amount of lye needed to saponify any combination of soapmaking oils.
    Downloads: 0 This Week
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  • 16

    Ship Lock Scheduling

    Scheduling lockages at ship locks with several parallel lock chambers

    This Java software includes algorithms of combinatorical optimization for the NP-hard offline ship lock scheduling problem. Solutions and performed computations can be displayed graphically. Besides, there is a framework for generating test instances and running these in parallel, as well as R/JGR code for statistical evaluation. Some tools for estimating the quality of calculated solutions will be further improved. Initially the software was developed within a project of TU Berlin regarding...
    Downloads: 0 This Week
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  • 17
    ICE (Interval Calculator for Engineer)

    ICE (Interval Calculator for Engineer)

    Interval Calculator for Engineer

    ICE is a simple mathematical calculator with very useful shortcuts for Engineer: works natively with tolerance, can run Monte Carlo analysis, uses engineer notation, includes most of the day by day functions used by engineers.
    Downloads: 0 This Week
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  • 18

    CRAFTY

    Competition for Resources between Agent Functional Types

    CRAFTY is a large-scale ABM of land use change. It has been designed to allow efficient but powerful simulation of a wide range of land uses and the goods and services they produce. It is fully open-source and can be used without the need for any programming.
    Downloads: 1 This Week
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  • 19
    Etchimaths(A'LEVEL)

    Etchimaths(A'LEVEL)

    Etchimaths(A'LEVEL) is a typical Mathematics software for A'LEVEL

    Etchimaths(A'LEVEL) is a Mathematics software, a helping tool for Mathematics simulation(solving) and study for the GCE ADVANCED LEVEL standard.It is a solving machine as well as a teaching machine
    Downloads: 0 This Week
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  • 20

    YASIM Commander

    YASimCommander is a platform-independent editor for YASIM files.

    YASim Commander is a platform-independent, open source editor for creating and editing YASim aircraft models in Flightgear.
    Downloads: 0 This Week
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  • 21
    Syntainia
    The objective of this project is to provide an innovative tool for visualization of multiples genomes. Written in Java, it presents a simple and intuitive user interface to view and manipulate the relationships between groups of genes.
    Downloads: 0 This Week
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  • 22
    KAnalyze

    KAnalyze

    DNA/RNA Sequence K-mer Toolkit

    KAnalyze is a Java toolkit designed to convert DNA and RNA sequences into k-mers. It is both a command line application and an API.
    Downloads: 0 This Week
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  • 23
    Opt4J

    Opt4J

    Modular Java framework for meta-heuristic optimization

    ...It contains a set of (multi-objective) optimization algorithms such as evolutionary algorithms (including SPEA2 and NSGA2), differential evolution, particle swarm optimization, and simulated annealing. The benchmarks that are included comprise ZDT, DTLZ, WFG, and the knapsack problem. The goal of Opt4J is to simplify the evolutionary optimization of user-defined problems as well as the implementation of arbitrary meta-heuristic optimization algorithms. For this purpose, Opt4J relies on a module-based implementation and offers a graphical user interface for the configuration as well as a visualization of the optimization process.
    Downloads: 0 This Week
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  • 24
    ICon (Input Configurator) is a Java-based system for managing input devices and building advanced interaction techniques using a dataflow model. It contains a runtime engine, a rich library of input devices, several processing modules and a visual editor.
    Downloads: 0 This Week
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  • 25
    Visualization of Protein-Ligand Graphs

    Visualization of Protein-Ligand Graphs

    Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools

    NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/
    Downloads: 0 This Week
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