Search Results for "tools + java"

We present ERNE (Extended Randomized Numerical alignEr), a short string alignment package whose goal is to provide an all-inclusive set of tools to handle short (NGS-like) reads. ERNE comprises ERNE-FILTER (read trimming and continamination filtering), ERNE-MAP (core alignment tool/algorithm), ERNE-BS5 (bisulfite treated reads aligner), and ERNE-PMAP/ERNE-PBS5 (distributed versions of the aligners),

The Avalon Cheminformatics Toolkit contains tools to render and canonicalize SMILES and manipulate MOL file and related formats as well as structure fingerprinting.

...Minor setup- and make reconfiguration bugs, no changes planned. The Command Centre is a Simulation Programming Framework for advanced Command and Control Simulators on Linux/Windows using C/C++ and Java. The Framework integrates with Leading Tools like Visual Paradigm (UML), Net Beans 7.0 (Java), and Code Warrior (C/C++). The codebase supports building Heterogenous Command and Control Consoles and Accelerated User Attached Audiovisuals. The Command Centre Real Time Simulation Framework (under RT Linux) allows designers to build Fast Prototyped Consoles for advanced Simulations running on Local Area Networks.

Cross-platform data acquisition and visualization software with an embedded HTTP-server, binary protocol parsing library, protocol emulation server, remote secure administration server, embedded Groovy scripting facilities and HMI (SCADA) visualization module.