Showing 16 open source projects for "mud mapper linux"

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  • 1
    SimpleDCS
    SimpleDCS is a Distributed Control System made easy - fully configurable both on hardware and a software level. Experimental stage (alpha)
    Downloads: 0 This Week
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  • 2
    BarraCUDA Fast Short Read Aligner
    Barracuda is a high-speed sequence aligner based on Sanger's BWA and utilizes the latest Nvidia CUDA architecture for accelerating alignments of sequence reads generated by next-generation sequencers.
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    Downloads: 0 This Week
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  • 3
    olego

    olego

    OLego – short or long RNA-seq read mapping to discover exon junction

    OLego is a program specifically designed for de novo spliced mapping of mRNA-seq reads. OLego adopts a seeding and extension scheme, and does not rely on a separate external mapper. It achieves high sensitivity of junction detection by using very small seeds (12-14 nt), efficiently mapped using Burrows-Wheeler transform (BWT) and FM-index. This also makes it particularly sensitive for discovering small exons. It is implemented in C++ with full support of multiple threading, to allow fast...
    Downloads: 0 This Week
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  • 4
    OpenOrienteering

    OpenOrienteering

    Former project page

    See https://www.openorienteering.org/apps/mapper/
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    Downloads: 14 This Week
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  • 5

    Automalator

    State Dependency deconstructor and mapper for C source code.

    Flowcharts not telling you what you want to know about some C source code? Try a State Dependency map! Every C source file is an implemention of a state machine. Implicit in the definition of a state machine is a network of dependencies between the states. The Automalator * deconstructs the C code into the core state machine * collates the transactions into the dependency net * generates a diagram-format file with the states and dependencies as the nodes and edges. ...
    Downloads: 0 This Week
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  • 6

    smalt

    A mapper for DNA sequencing reads

    SMALT aligns DNA sequencing reads with genomic reference sequences. It employs hashing combined with dynamic programming.
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    Downloads: 56 This Week
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  • 7
    Fast Alignment Search Tool suite. A fast sequence read mapper suite for short reads generated with the Illumina platform. Contains mrFAST and mrsFAST. Joint development by University of Washington and Simon Fraser University
    Downloads: 1 This Week
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  • 8
    A set of very optimized tools for indexing/querying huge genomes/files. Provided so far: a very fast exact mapper, and an unconstrained split-mapper
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    Downloads: 6 This Week
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  • 9
    CTruck3D _Open

    CTruck3D _Open

    realistic truck & car simulator, with OpenGL graphics

    update: https://sourceforge.net/projects/newctruck3drally/ It's a 3D, physically realistic truck/car simulator, oriented to dirt tracks. This is subsancially kept as hystorical. The environment is a hilly terrain which can also be user-defined in the form of a Bitmap image file (where intensity of red component defines height). It's similar to the classic "Terep 2". Particular care for internal cam. Written in standard C. There's a Windows executable ready for use, but it's compilable...
    Downloads: 1 This Week
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  • 10
    BSmapper - Sequence mapper for bisulfite sequencing reads for DNA methylation studies. Can handle Sanger and 454 reads for mapping to whole genomes or target regions.
    Downloads: 0 This Week
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  • 11
    The NetEpi project is developing open-source, network-enabled tools for epidemiology and public health practice.
    Downloads: 0 This Week
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  • 12
    smem-map is a tool used to profile a process's virtual memory to identify address ranges who's contents remain static.
    Downloads: 0 This Week
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  • 13
    UDSL is abreviation of Universal Distributed Simulation Library. This is library for building flexible distributed simulation systems. This library uses Object Oriented appoach and based on distributed and decentralized architecture.
    Downloads: 0 This Week
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  • 14
    Maiden-core is a Linux kernel robotics API module, extensible in Erc. The Maiden Project also documents and develops the Maiden architecture for mobile robots, a set of (optional) designs and standards for robots using the Maiden-core API.
    Downloads: 0 This Week
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  • 15
    Atomatrix is a multithreaded execution system of atomic matrices with a dynamic compiler and a network eviron. It is the next generation object-orientated environment. XML, MUD-OO CLI, GnucDNA support, windows and many subprojects are built-in.
    Downloads: 0 This Week
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  • 16
    The VP7 WKP is a GTK program which simulates the decay of radioactive nuclei. The user can do decay/activity measurements on various pre- or user defined materials. It is also possible to study the effectivity of aluminium, paper and lead as shields. This
    Downloads: 0 This Week
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