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YANG (Yet Another Network Generator - Java) enables you to generate social networks given various social rules observed in the real population. Uses: generate realistic networks to be used in individual-centric models, teaching or benchmarking.
A group of useful tools for working with 802.15.4 networks. Currently includes a sniffer that interfaces with Wireshark in Windows/Linux (and maybe Mac OS X too), allowing you to do 802.15.4, ZigBee, and 6LoWPAN Sniffing.
This project aims the requirement of managed informations / documents in the treatment of patients, i.e. integrated care. The underlaying data model implements standards of electronic health recording, the project is based on a SQL db and Java EE framework. This is currently a student driven project for educational purposes.
Java Decision Diagrams (BDD) libraries: JDD and JBDD
This project has been moved to bitbucket.org:
- https://bitbucket.org/vahidi/jbdd/wiki/Home
- https://bitbucket.org/vahidi/jdd/wiki/Home
It includes two libraries for working with decision diagrams:
- JBDD: a Java interface to two popular BDD libraries, CUDD and BuDDy
- JDD: a native Java library supporting BDD, Z-BDD
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This project aims to be a easy-to-use toolkit of algorithms and utilities for semantic data mining. So far all algorithms are implemented as web services and we provide widgets for their use in the Orange4WS data mining platform.
The goal of the See&Touch project is to design/implement a special mouse for disabled people, which allows a person to fully control a computer by using just vision and one single body movement. This project develops hardware, firmware and software.
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Mostly academic research Project about next generation computing (Software only), trying to find new ideas and solutions how computers can work in the future using technologies like voice recognition and synthesisation. Everyone is invited to join in
Software application, firmware and U.I. for 4-motors 3-axis milling machine, open hardware, software and mechanics. See also project in details for schematics and images on http://www.contesti.eu/opensource/xyz-dc-motor-controller
The goal of this project is to develop open-source libraries for interval arithmetic and interval constraints in a wide variety of languages and for a wide variety of platforms. Demos and documentation will also be developed.
provided.
EMBOSS is a dynamic and comprehensive Open Source package for bioinformatics (DNA and protein sequence analysis, protein structure, phylogenetics, etc.). EMBOSS is written in C, also compatible with C++, and has a separate Java interface (Jemboss)
PACS - a system for managing and maintaining Radiology images. RIS - Radiology Information System for automating workflow in a Radiology Department. PACS/RIS - the union of the two.
Code for the SALAMANDER environmental sensor project. SALAMANDERs are wireless motes (Crossbow TelosB with MSP430 processor) with a string of sensors attached. Mote code is in nesC. DataGetter java code enables mobile phones to collect sensor data.
OpenDMTP is a protocol/framework that allows communications with small devices (mobile phones, PDA's, and other high-latency/low-bandwidth devices), especially geared towards the transmission of GPS, temperature, and other remote monitoring information.
A graphical MatLab framework for estimating the parameters of, modeling and simulating static and dynamic linear and polynomial systems in the errors-in-variables context with the intent of comparing various estimation strategies.
This desktop application provides graphical control of K8055, a USB Experiment Interface Board by Velleman (http://www.velleman.eu/). It will be mostly platform-independend at a later time. The current (beta) version is for windows 2000/XP/Vista/7 on 32Bit. It is incompatible with all other Operating Systems and with 64Bit architecture.
I stopped developing this application. Feel free to reuse the code or contact me on Questions.
Everyday Software for the Researcher of Restricted Means: This project is intended to offer scientists and students with small budgets advanced versions of aqua-built desktop-editing, graphics and statistical applications for MacOSX.
A fully customizable, extensible, scalable computational engine pluggable with various statistical and mathematical engines (R, Matlab, Octave, scilab...) The main focus and datatype considered is timeseries: the project contains also a portable and effi
The OsMoSys Framework is a research project implementing a multi-formalism multi-solution framework for defining and analysing complex systems models. It uses model composition to cope with systems complexity.
The Rossum Project is an attempt to collect and distribute robotics software. We are seeking help with our first project, a mobile-robot simulator featuring a 2-D virtual world, and new work including artificial intelligence and robot-control logic.
DNA sequencing quality values, base calling and trace processing
Tracetuner is a tool for base and quality calling of trace files from DNA sequencing instruments. Originally developed by Paracel, a Celera Business, this code base was released as open source in 2006. TraceTuner was used by Celera to call 30+ million reads from both Drosophila and human genome sequencing projects. In 2000, Applied Biosystems bundled TraceTuner with ABI3700 Genome Analyzers and shipped it to the customers of these capillary electrophoresis sequencers. Later versions of...