Search Results for "raw"
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Showing 27 open source projects for "raw"
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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MeshLab
The open source mesh processing system
...The open source system for processing and editing 3D triangular meshes. It provides a set of tools for editing, cleaning, healing, inspecting, rendering, texturing and converting meshes. It offers features for processing raw data produced by 3D digitization tools/devices and for preparing models for 3D printing. -
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Grassroots DICOM
Cross-platform DICOM implementation
Grassroots DiCoM is a C++ library for DICOM medical files. It is accessible from Python, C#, Java and PHP. It supports RAW, JPEG, JPEG 2000, JPEG-LS, RLE and deflated transfer syntax. It comes with a super fast scanner implementation to quickly scan hundreds of DICOM files. It supports SCU network operations (C-ECHO, C-FIND, C-STORE, C-MOVE). PS 3.3 & 3.6 are distributed as XML files. It also provides PS 3.15 certificates and password based mecanism to anonymize and de-identify DICOM datasets. -
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The C-Munipack is an astrophotometry software package, which offers a complete solution for reduction of images carried out by CCD or DSLR camera, intended on a observation of variable stars, exoplanets and minor Solar System bodies. It provides a simple and intuitive graphical user interface.
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The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
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AI-generated apps that pass security reviewRetool lets you generate dashboards, admin panels, and workflows directly on your data. Type something like “Build me a revenue dashboard on my Stripe data” and get a working app with security, permissions, and compliance built in from day one. Whether on our cloud or self-hosted, create the internal software your team needs without compromising enterprise standards or control.
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PGMania
Astrophotography image & video processor. Full processing cycle
PGMania is a universal package for processing deep space images. The program provides wide and unique functionality, a powerful and flexible tool with a clear and user-friendly interface. The program performs all image processing cycles for astrophotography, including filtering, cleaning, aligning, image calibrating, stacking, post-processing, format conversion, cropping, rotations, many special operations and much more. PGMania is environmentally friendly - it does not clutter your photos... -
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Comet MS/MS search engine
Comet open source tandem mass spectrometry (MS/MS) search engine.
...Comet currently exists as a simple Windows or Linux command line binary that only does MS/MS database search. Supported input formats are mzXML, mzML, ms2, and Thermo RAW files. Supported output formats are tab-delimited text, Percolator pin, SQT, and pepXML Documentation and project website: http://comet-ms.sourceforge.net -
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sRNAWorkbench
The UEA sRNA Workbench
A suite of tools for analysing small RNA (sRNA) data from Next Generation Sequencing devices. Including expression profiling of known mirco RNA (miRNA), identification of novel miRNA in deep-sequencing data and identification of other interesting landmarks within high-throughput genetic data -
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QModMaster
Modbus TCP,RTU Master Software.
QModMaster is a free Qt-based implementation of a ModBus master application. A graphical user interface allows easy communication with ModBus RTU and TCP slaves. QModMaster also includes a bus monitor for examining all traffic on the bus. QModMaster is based on libmodbus <http://www.libmodbus.org/> for modbus communication and on QsLog <https://bitbucket.org/codeimproved/qslog> for logging. Supports both Windows and Linux. For Windows a pre-compiled binary is availiable. It does not... -
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BinCoMerge
Compare binary files in hexadecimal view
BinCoMerge is a binary files diff at byte resolution. It shows hexadecimal and raw ASCII data. BinCoMerge is seeking for common blocks from the bigger ones to the lower ones. It works by levels of minimum block sizes which are powers of 2. For example, with a file sizing between 16 KiB and 32 KiB, Bincomerge will firstly seek for all common blocks bigger than 16 KiB. Then, it will seek for all common bigger than 8 KiB, then 4KiB, 2KiB, 1024 Bytes... -
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fcGENE: Genotype format converter
Format converting tool for genotype Data (e.g.PLINK-MACH,MACH-PLINK)
Main application is twofold: first to convert genotype SNP data into formats of different imputation tools like PLINK MACH, IMPUTE, BEAGLE and BIMBBAM, second to transform imputed data into different file formats like PLINK, HAPLOVIEW, EIGENSOFT and SNPTEST. Readable file formats: plink-pedigree (ped and map), plink-raw, plink-dosage, mach , minimac, impute, snptest, beagle and bimbam. Similarly all kinds of imputation of outputs are also accepted. Formats which can be generated by fcGENE: plink-pedigree, plink-raw, plink-dosage, mach-inputs, minimac-inputs, impute-inputs, beagle-inputs and bimbam-inputs, HAPLOVIEW-inputs, EIGENSOFT-inputs. ... -
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ImatiSTL
Fix STL files for 3D printing
ImatiSTL is a C++ library for applications that need to finely post-process raw polygon meshes represented by STL files. It is particularly useful in 3D printing scenarios: the repairing functions provided by ImatiSTL bridge the gap between printable meshes and real-world meshes with diverse potential defects and flaws (e.g. degenerate triangles, self-intersections, surface holes, ...). ImatiSTL provides both functions for local mesh repairing and methods for global remeshing. ... -
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UPDATE March 14, 2018 Repository and tracking officially moved to github. https://github.com/opticks-org/opticks Sourceforge mailing lists are still in use. Opticks is an open source remote sensing application and development framework.
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adc2pc
Capture & visualize digital measurements on PC
Application was designed to provide user a capability to visualize ADC measurements flow on PC monitor and to save data on a hard disk. At a present moment application uses serial port connection for data capturing. That is why at first you should provide all hardware drivers and other resources for ADC that allow to communicate with PC. -
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FamSeq
Variant calling on the basis of pedigree information
...In family-based sequencing studies, information from all family members should be utilized to more accurately identify new germline mutations. FamSeq serves this purpose by providing the probability of an individual carrying a variant given his/her entire family’s raw measurements. FamSeq accommodates de novo mutations and can perform variant calling at chromosome X. To accommodate variations in data complexity, FamSeq consists of three distinct implementations of the Mendelian genetic model: the Bayesian network algorithm, Elston-Stewart algorithm and Markov chain Monte Carlo algorithm. To make the software efficient and applicable to large families, we parallelized the Bayesian network algorithm that copes with pedigrees with inbreeding loops without losing calculation precision on an NVIDIA® graphics processing unit. -
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DRAMMS
A Deformable Medical Image Registration Toolbox
DRAMMS is a software package designed for 2D-to-2D and 3D-to-3D deformable medical image registration tasks. Released by Section of Biomedical Image Analysis (SBIA) at the University of Pennsylvania. Some typical applications of DRAMMS include, -- Cross-subject registration of the same organ (can be brain, breast, cardiac, etc); -- Mono- and Multi-modality registration (MRI, CT, histology); -- Longitudinal registration (pediatric brain growth, cancer development, mouse... -
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FantasticLifeExpectancyCalculator
Calculate your and your spouse's life expectancy !
Using statistical modelling against raw data obtained from a USA Annuity mortality table, the Fantastic Life Expectancy Calculator allows users to input a number of parameters to determine their life expectancy. This calculator is provided free and for entertainment purposes only. It does not claim to accurately predict life expectancy for a specific individual or a specific couple. -
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AstroAviBrowser
Editing tool for astronomical videos
AstroAviBrowser is a small tool for astronomy imaging capture/processing. With AstroAviBrowser, you may open a video file, select the good frames and save the new sequence in a new avi file. It also debayer your raw sequences. -
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noise-free-cnv
program for analyzing and manipulating DNA microarray data
...The visualization and the suppression of genomic waves, the comparison of two datasets by subtraction and the simultaneous inspection of LRR and BAF values are amongst the most frequent applications of this software. This program is able to read and write files suitable for PennCNV or raw files containing measured values of any kind. -
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WaveSorter
A powerful, versatile tool for offilne spike analysis and sorting
WaveSorter emphasizes dynamic visualization and versatility. Slider controls let the user select any coefficient or sample from any of several transforms, which can then be plotted to either axis of a 2D histogram (scatterplot). Within the waveform space, cursor-based controls let the user select subregions of the waveform space or individual waveforms to view. The user may cluster waveforms manually or via one of several popular clustering programs. The classification along with waveform... -
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any2ufmf
Compress videos to ufmf format (micro fly movie format)
any2ufmf reads in videos of various formats and outputs a compressed UFMF (micro-fly movie format) video. I'm not sure what kinds of videos it reads -- whatever OpenCV reads. It has worked on uncompressed AVIs (BI_RGB Raw Bitmap), motion JPEG AVIs, and H.264 Quicktime MOV files. I wrote this program when debugging my video data capture code. It's interface is rather bare, but it may be useful to someone. Requirements: Windows 64 Operating System Microsoft Visual C++ 2010 Redistributable Package, available for download here: http://www.microsoft.com/en-us/download/details.aspx?... -
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Interactive viewer for ngspice raw files. Provide interface to view analog waveforms, results of ngspice simulator. Allows printing, saving as image, copy to clipboard. Uses wxWidget, but heavily tailored to UNIX OS. Tested on Ubuntu 10.04
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Vijner 974 E-Sys (2048 bits and unlimited encryption). Enables easy (un-)encryption from text input or .txt file, and to (un-)encrypt raw files, with Vigenère Algorithm + unlimited encryption keys. Simple and powerful. Adapt to fit your needs.
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Post-processing navigation software for raw GPS/GNSS receiver data (pseudorange, Doppler, and carrier phase data) in stand-alone, and differential mode. Portable C foundation code. C++ for more advanced apps. NovAtel OEM4 and RINEX supported.
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SureFit generates 3D mesh surfaces (in VTK and Caret formats) from 3D structural MRI volumes (in formats such as Analyze, AFNI, raw).
