Search Results for "local"
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Showing 61 open source projects for "local"
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Bowtie 2
A fast and sensitive gapped read aligner
...It is especially effective for reads ranging from around 50 bases to hundreds or thousands of characters, and it supports modern sequencing workflows that require gapped, local, and paired-end alignment. The tool builds compact FM-index-based reference indexes, keeping memory usage low even for large genomes like the human genome. Bowtie 2 outputs alignments in SAM format and includes companion utilities for building and inspecting indexes. It is widely used in bioinformatics pipelines for RNA-seq, DNA-seq, metagenomics, variant analysis, and other sequencing-based research tasks. ... -
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GeographicLib
Geographic library
GeographicLib is a small C++ library for: geodesic and rhumb line calculations; conversions between geographic, UTM, UPS, MGRS, geocentric, and local cartesian coordinates; gravity (e.g., EGM2008) and geomagnetic field (e.g., WMM2020) calculations. -
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Astrolog
Astrology calculation, charting, and analysis
Astrolog is astrology software featuring many types of computation, display, graphics, comparison, and analysis. It supports multiple environments, such as MS Windows and Unix X Windows, with complete C++ source code available. For more information see the Web site: http://www.astrolog.org/astrolog.htm -
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AtteStat
The package for statistical data analysis and applied mathematics
...NOTICE FOR RF RESIDENTS: This software is not included in the Unified Register of Russian Programs for Electronic Computers and Databases. Support may be limited in the RF region due to local regulatory constraints. -
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StatAnt
The package for statistical data analysis
...NOTICE FOR RF RESIDENTS: This software is not included in the Unified Register of Russian Programs for Electronic Computers and Databases. Support may be limited in the RF region due to local regulatory constraints. -
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Criterial
The package for statistical data analysis and applied mathematics
...NOTICE FOR RF RESIDENTS: This software is not included in the Unified Register of Russian Programs for Electronic Computers and Databases. Support may be limited in the RF region due to local regulatory constraints. -
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ME.com
Mathematical & engineering components for software development
...NOTICE FOR RF RESIDENTS: This software is not included in the Unified Register of Russian Programs for Electronic Computers and Databases. Support may be limited in the RF region due to local regulatory constraints. -
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OSHMI - Open Substation HMI
SCADA HMI for substations, IoT and automation applications
Now with IEC61850 support! This project combines existing open source projects and tools to create a very capable, mobile and cloud-friendly HMI system that can rival proprietary software. This approach makes it possible to join forces of each project (Chromium, SVG/HTML5, PHP, Lua, SQLite, Inkscape, Lib61850, OpenDNP3, Nginx, Vega, PostgreSQL, Grafana,…) to achieve a great set of open, evergreen, modular and customizable tools for building great HMIs for automation projects. This is not... -
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MLPACK is a C++ machine learning library with emphasis on scalability, speed, and ease-of-use. Its aim is to make machine learning possible for novice users by means of a simple, consistent API, while simultaneously exploiting C++ language features to provide maximum performance and flexibility for expert users. * More info + downloads: https://mlpack.org * Git repo: https://github.com/mlpack/mlpack
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Qgama
Adjustment of local surveying networks, binary builds for Windows
...The most simple case is Sqlite3 file database, which does not need any special knowledge from the user. http://www.gnu.org/software/gama/qgama Command line program gama-local is distributed with Qgama in folder bin. -
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XIVO
X Inertial-aided Visual Odometry
...It is a simplified version of Corvis [Jones et al.,Tsotsos et al.], designed for pedagogical purposes, and incorporates odometry (relative motion of the sensor platform), local mapping (pose relative to a reference frame of the oldest visible features), and global mapping (pose relative to a global frame, including loop-closure and global re-localization, this feature, present in Corvis, is not yet incorporated in XIVO). XIVO runs at 140FPS on stored data (here from a RealSense D435i sensor) or on live streams with a latency of around 1-7ms, depending on the hardware. ... -
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FiboSearch
Efficiently locate minumum of function of non-negative integer
Fibonacci search for functions! Given a real-valued function of a non-negative integer with one minimum at i in {0, 1, 2, ..., n} and no local minima, efficiently locate that minimum in log (n) time. -
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GapFiller
A de novo local assembler for paired reads
GapFiller is a seed-and-extend local assembler to fill the gap within paired reads. It can be used for both DNA and RNA and it has been tested on Illumina data. GapFiller can be used whenever a sequence is to be assembled starting from reads lying on its ends, provided a loose estimate of sequence length. -
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gsasnp2
PubMed ID: 29562348 / DOI: 10.1093/nar/gky175
...GSA-SNP2 accepts human GWAS summary data (rs numbers, p-values) or gene-wise p-values and outputs pathway genesets ‘enriched’ with genes associated with the given phenotype. It also provides both local and global protein interaction networks in the associated pathways. * Article: SYoon, HCTNguyen, YJYoo, JKim, BBaik, SKim, JKim, SKim, DNam, "Efficient pathway enrichment and network analysis of GWAS summary data using GSA-SNP2", Nucleic Acids Research, Vol. 46(10), e60(2018). * PubMed ID: 29562348 * DOI: 10.1093/nar/gky175 -> PLEASE MOVE OR MAKE A COPY OF 'DATA' FOLDER INTO YOUR INTENSIVE TEST FOLDER (I.E. ... -
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Electronic Circuit Optimization
Optimer: a SPICE base electrical/ electronic circuit optimization tool
This project is dedicated to the optimization of (any) electrical and electronic circuits and components using evolutionary and heuristic algorithms incorporated with SPICE simulators (such as HSPICE, ngSPICE, etc.). We provide Optimer, which is a user graphical interface for circuit design and optimization. Website: https://www.circuitoptimization.com/ E-mail: contact@circuitoptimization.com/ -
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mssolutions
Makes magic squares.
These programs make magic squares and rectangles using "Constraint-Based Local Search". (For non-square rectangles, input the order as two numbers.) There are 3 similar programs: CompleteSquare, CompleteSquareSteps, and MagicSquares. Given an input square with some cell values between 1 and NxN specified, (and other cell values 0), CompleteSquare attempts to complete a magic square by placing the remaining values. -
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SparesPOP is a MATLAB implementation of a sparse semidefinite programming (SDP) relaxation method proposed for polynomial optimization problems (POPs). Please send a message to kojima-spop@is.titech.ac.jp if you have any question and/or request. We also release SparsePOPC++ and SparsePOPC++-windows. Both implementations are SparsePOP which does not use MATLAB, but only C++. In particular, SparsePOPC++-windows contains a binary file which works on Windows, and does not require to compile.
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JESUBOTs - FRC Team #5809
Rockhurst High School Robotics Team
...We intend to use Sourceforge to share all of our present and future robot hardware designs and software with anyone that is interested. The team transitioned to SolidWorks in the 2018 season since our local universities all teach using SolidWorks. Our rookie year was 2016 when we were honored to win the Rookie All-Star Award and had the pleasure of attending the FRC World's Competition in St. Louis, Missouri. Note: We're the team with the wooden bow-ties. SVN Project Root: https://svn.code.sf.net/p/rhsfrc/svn/ Mech Team Root: svn+ssh://sfusername@svn.code.sf.net/p/rhsfrc/svn/2017/mech SW Team Root: https://svn.code.sf.net/p/rhsfrc/svn/2017/sw Rockhurst High School, located in Kansas City, Missouri, is a Jesuit Catholic private college preparatory school founded in 1923 for boys grades nine through twelve. ... -
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2D Statistical Models. Building: shape model, texture model and concatenated appearance model; Fitting: 1D profile ASM, 2D profile ASM, direct local texture constrained(LTC) ASM, basic AAM, ICIA AAM, IAIA AAM, etc.
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ImatiSTL
Fix STL files for 3D printing
...It is particularly useful in 3D printing scenarios: the repairing functions provided by ImatiSTL bridge the gap between printable meshes and real-world meshes with diverse potential defects and flaws (e.g. degenerate triangles, self-intersections, surface holes, ...). ImatiSTL provides both functions for local mesh repairing and methods for global remeshing. Local repairing is useful when the available data must remain exactly as it is in the input STL file, whereas global remeshing may fix even highly corrupted meshes at the cost of a small distortion in the resulting fixed mesh. -
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HistoryCal
A calculator to work with historical dates and calendars.
...The calculator also has a script language that allows you to create variations of the built-in calendars: calendars that shift the new year to a different day; hybrid calendars that switch between schemes; local observational calendars that depend on a particular location; year counts that change for specific eras (regnal calendars) and calendars that require adjustment due to subtle differences in calculation. -
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Saguaro Genome-Wide is a program to detect signatures of selection within populations, strains, or species. It takes SNPs or nucleotides as input, and creates statistical local phylogenies for each region in the genome.
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MoleQueue
Desktop integration of high performance computing resources
MoleQueue is an open-source, cross-platform, system-tray resident desktop application for abstracting, managing, and coordinating the execution of tasks both locally and on remote computational resources. It is built and tested and Linux, Mac OS X, and Windows, with nightly binaries currently available for Mac OS X and Windows. Users can set up local and remote queues that describe where the task will be executed. Each queue can have programs, with templates to facilitate the execution of the program. Input files can be staged, and output files collected using a standard interface. -
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ezSIFT
An easy-to-use standalone SIFT library written in C/C++
*************************************************************************** Updated 06/28/2018 The ezSift project has moved to https://github.com/robertwgh/ezSIFT *************************************************************************** The SIFT (scale-invariant feature transform) algorithm is considered to be one of the most robust local feature detector and description methods. Most of the open-source SIFT implementations rely on some 3rd-party libraries. Some of them even rely on a few different large libraries. These dependencies make the installation, compilation and usage not easy. The ezSIFT library provides a standalone and lightweight SIFT implementation written in C/C++. ... -
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Manifold mesh processing
Mesh and point cloud processing tools
A suite of tools for processing and analyzing meshes and point clouds. 1) Ensuring that meshes are manifold, ie, "nice" 2) Simple smoothing/noise reduction 3) Bare-bones point cloud to mesh and robust normals for point clouds 4) Mesh simplification 5) Curvature calculation on meshes 6) Local shape descriptors on meshes
