Showing 6 open source projects for "blast"

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  • 1
    Integrated Circuit Design Software that quickly automates design of analog and digital circuits for use in schematics, device modelling, design re-use, architecture, signal processing and IC manufacture.
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  • 2

    provean

    Predicting the functional effect of protein sequence variations

    PROVEAN (Protein Variation Effect Analyzer) is a software tool which predicts whether an amino acid substitution or indel has an impact on the biological function of a protein. The prediction is based on the change, caused by a variation, in the similarity of query sequence to closely related sequences collected through BLAST.
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    Downloads: 8 This Week
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  • 3
    Windows command line utility calculating protein orthologs using best reciprocal hit from BLAST alignment output
    Downloads: 0 This Week
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  • 4
    IMAS is a Visual Analytics system for the discovery of knowledge in genomic information. IMAS enables genomic scientists to rapidly analyze and visualize a set of microbial genomic sequences using tools such as Glimmer, Blast, Clustal-W, Primer3.
    Downloads: 0 This Week
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  • 5
    IGBM (Identification of gene blocks in microorganisms) implements a BLAST-like method to infer conserved gene clusters among closely related prokaryotes, and provides a graphical user interface to navigate the identified clusters and their annotated info
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  • 6
    BioSap-Blast Integrated Oligonucleotide Selection Accelerator Package. BioSap selects unique oligos for microarrays by detecting user-defined parameters and running parallel instances of Featurama and Blast on compute engines, producing xml output files.
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