Search Results for "k-meleon"
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63 programs for "k-meleon" with 2 filters applied:
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Red Hat Enterprise Linux on Microsoft AzureRed Hat Enterprise Linux (RHEL) on Microsoft Azure provides a secure, reliable, and flexible foundation for your cloud infrastructure. Red Hat Enterprise Linux on Microsoft Azure is ideal for enterprises seeking to enhance their cloud environment with seamless integration, consistent performance, and comprehensive support.
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Armadillo
fast C++ library for linear algebra & scientific computing
* Fast C++ library for linear algebra (matrix maths) and scientific computing * Easy to use functions and syntax, deliberately similar to Matlab / Octave * Uses template meta-programming techniques to increase efficiency * Provides user-friendly wrappers for OpenBLAS, Intel MKL, LAPACK, ATLAS, ARPACK, SuperLU and FFTW libraries * Useful for machine learning, pattern recognition, signal processing, bioinformatics, statistics, finance, etc. * Downloads:... -
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Subread
High-performance read alignment, quantification and mutation discovery
... in the following paper: Yang Liao, Gordon K Smyth and Wei Shi. "The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote", Nucleic Acids Research, 2013, 41(10):e108 -
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ransfoil
console to calculate airflow around an airfoil based on RANS approach
RANSFOIL is a console program to calculate airflow field around an isolated airfoil in low-speed, subsonic, transonic or supersonic regime by numerically solving the Reynolds averaged Navier-Stokes (RANS) equations using mature computational fluid dynamics (CFD) method. As postprocess results, the aerodynamic parameters of the airfoil, e.g., lift coefficient and drag coefficient, can be integrated from the airflow distribution near wall boundary. In addition, the coupling between airflow and... -
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MLPACK is a C++ machine learning library with emphasis on scalability, speed, and ease-of-use. Its aim is to make machine learning possible for novice users by means of a simple, consistent API, while simultaneously exploiting C++ language features to provide maximum performance and flexibility for expert users. * More info + downloads: https://mlpack.org * Git repo: https://github.com/mlpack/mlpack
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illness index
illness_index A Computer Program of a Medical Textbook.
A computer scientist has attempted to program a textbook of British general practice (primary care) medicine, that is, Hodgkin K (1978) "Towards Earlier Diagnosis....", 4th Edition, Churchill Livingstone. If a patient types presenting findings (such as headache, cough), the program prompts the user for expansion/denial of appropriate findings, in order to construct a list of patient findings. The program also calculates a list of likely diseases, which the user can use the web to find out... -
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An R package for metrology. metRology provides classes and calculation and plotting functions for metrology applications, including measurement uncertainty estimation and (eventually) inter-laboratory metrology comparison studies.
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popt4jlib
Parallel Optimization Library for Java
popt4jlib is an open-source parallel optimization library for the Java programming language supporting both shared memory and distributed message passing models. Implements a number of meta-heuristic algorithms for Non-Linear Programming, including Genetic Algorithms, Differential Evolution, Evolutionary Algorithms, Simulated Annealing, Particle Swarm Optimization, Firefly Algorithm, Monte-Carlo Search, Local Search algorithms, Gradient-Descent-based algorithms, as well as some well-known... -
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MRiLab
A Numerical MRI Simulation Platform
The MRiLab project is moving to GitHub, the latest version can be obtained from https://leoliuf.github.io/MRiLab/ The MRiLab is a numerical MRI simulation package. It has been developed and optimized to simulate MR signal formation, k-space acquisition and MR image reconstruction. MRiLab provides several dedicated toolboxes to analyze RF pulse, design MR sequence, configure multiple transmitting and receiving coils, investigate magnetic field related properties and evaluate real-time imaging... -
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Suite of tools for DNA sequence analysis - searching (EST, mRNA, sequencer reads); aligning (ESTs, mRNA, whole genome); and analysis (repeats, kmers).
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runjags
The 'runjags' R package and standalone JAGS extension module
This package provides high-level interface utilities for MCMC models via Just Another Gibbs Sampler (JAGS), facilitating the use of parallel (or distributed) processors for multiple chains, automated control of convergence and sample length diagnostics, and evaluation of the performance of a model using drop-k validation or against simulated data. Template model specifications can be generated using a standard lme4-style formula interface to assist users less familiar with the BUGS syntax... -
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The Virtual Math Teams (VMT) Project (vmt.mathforum.org) at the Math Forum enables K-12 math collaborative learning, professional development of educators, & group cognition research. VMT is now integrated with GeoGebra (http://www.geogebra.org/).
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KAnalyze
DNA/RNA Sequence K-mer Toolkit
KAnalyze is a Java toolkit designed to convert DNA and RNA sequences into k-mers. It is both a command line application and an API. -
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Belief Reviser
Belief Revision via PS-Merge under constraints belief merging operator
Belief revision is a central topic in knowledge representation and reasoning. It consists in incorporating a new belief, changing as few as possible of the original beliefs while preserving consistency. Revision always considers new evidence as a better belief. Such new evidence is usually represented in the form of a propositional formula which must be preserved after the revision. Here, the Δps (PS-Merge) belief merging operator is extended in order to consider constraints, and ... -
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Circuit simulator SPECI-SPICE
Circuit simulators like SPICE for low memory computers
SPECI-SPICE is a subset of SPICE intended to run on low powered computers like Amstrad CPC, ZX Spectrum, CP/M machines, old PC machines, some programmable calculators,etc. by keeping most important functionality of SPICE 2. -
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bnf2xml
simple BNF parser makes xml markup of matches
bnf2xml a simple BNF parser that takes text as input, searches according to a BNF query file, and outputs text marked up by the xml labels that show context. bnf2xml is as simple to use as any text binary ie, awk(1) grep(1). bnf2xml does not require C API because it outputs simple xml labeling. README is visible on file dl page. EXAMPLE: $ echo "hi" | bnf2xml patternfile <word><alph>h</alph><alph>i</alph></word> or <gas>hydrogen iodide</gas> patternfile says how to find... -
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BamBam
Tools for genomic analysis
BamBam includes numerous tools for analyzing DNA next-generation sequencing data. Tools are provided for calling SNPs and indels, identifying large scale deletions, tabulating counts of mapped reads, methylation analysis, and more. Depends on SAMtools (http://samtools.sourceforge.net/) and BAMtools (https://github.com/pezmaster31/bamtools). Also uses BioPerl, which is included in the download tarball. -
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LaNet-vi provides images of large scale networks on a two-dimensional layout. The algorithm is based on the k-core and k-dense (m-core) decomposition. For more details see http://lanet-vi.fi.uba.ar.
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Virastyar
Virastyar is an spell checker for low-resource languages
Virastyar is a free and open-source (FOSS) spell checker. It stands upon the shoulders of many free/libre/open-source (FLOSS) libraries developed for processing low-resource languages, especially Persian and RTL languages Publications: Kashefi, O., Nasri, M., & Kanani, K. (2010). Towards Automatic Persian Spell Checking. SCICT. Kashefi, O., Sharifi, M., & Minaie, B. (2013). A novel string distance metric for ranking Persian respelling suggestions. Natural Language Engineering, 19(2... -
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libsombrero
Astronomical object/structure detection from 1D and 2D data sets.
Sombrero is a fast wavelet image processing and object detection C library for astronomical images. Sombrero is named after the "Mexican Hat" shape of the wavelet masks used in image convolution and is released under the GNU LGPL library. -
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Trowel - Sequencing Error Corrector
Error Correction Module for Illumina Sequencing Reads
Trowel is an error correction module for Illumina sequencing reads, which is based on the k-mer spectrum approach. This tool is the first tool that uses a quality threshold instead of a coverage cutoff in order to extract trusted k-mers. This tool guarantees high accuracy and speed. This tool has been developed since 21. Jan. 2013 by Euncheon Lim in Prof. Dr. Detlef Weigel's Lab in Max-Planck Institute for Developmental Biology. First of all, you have to install the exact version of boost... -
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Adaptive Gaussian Filtering
Machine learning with Gaussian kernels.
Libagf is a machine learning library that includes adaptive kernel density estimators using Gaussian kernels and k-nearest neighbours. Operations include statistical classification, interpolation/non-linear regression and pdf estimation. For statistical classification there is a borders training feature for creating fast and general pre-trained models that nonetheless return the conditional probabilities. Libagf also includes clustering algorithms as well as comparison and validation... -
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An implementation of the Kernel-based Orthogonal Projections to Latent Structures (K-OPLS) method for MATLAB and R. The supplied functionality includes e.g. cross-validation, kernel parameter optimization, model diagnostics and plot tools.
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igafem
Open source 3D Matlab Isogeometric Analysis Code
Isogeometric analysis (IGA) is a fundamental step forward in computational mechanics that offers the possibility of integrating methods for analysis into Computer Aided Design (CAD) tools and vice versa. The benefits of such an approach are evident, since the time taken from design to analysis is greatly reduced leading to large savings in cost and time for industry. The tight coupling of CAD and analysis within IGA requires knowledge from both fields and it is one of the goals of the... -
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IMPACT_S
Integrated Multiprogram Platform Analyze & Combine Tests of Selection
Maldonado E, Sunagar K, Almeida D, Vasconcelos V, Antunes A (2014) IMPACT_S: Integrated Multiprogram Platform to Analyze and Combine Tests of Selection. PLoS ONE 9(10): e96243. doi: https://doi.org/10.1371/journal.pone.0096243 -
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resParser
Command line scientific calculator
... * Infinite number of variables * Specific functions for computation of resistors value (E12, E24) rounding, parallel computation, k = 000, M = 000000 * Store the status (hystory of the commands, variables status) between sessions This software is OPEN SOURCE and released under GPL license so you can feel FREE to use, copy, share, (but above all) to study, analyze and modify it as you like (within the terms of the license).