44 programs for "input file" with 2 filters applied:

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  • 1
    crossmap

    crossmap

    convert genome coordinates betweeen assemblies

    CrossMap is a program for convenient conversion of genome coordinates and genomeannotation files between assemblies (eg. lift from GRCh36/hg18 to GRCh37/hg19 or vice versa).It support file in BAM, SAM, BED, Wiggle, BigWig, GFF, GTF format.
    Downloads: 23 This Week
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  • 2
    ransfoil

    ransfoil

    console to calculate airflow around an airfoil based on RANS approach

    ... and heat transfer and the effect of surface roughness on near wall flow are considered by this program, it can be used for engineering calculation of the friction drag and heat transfer coefficients on airfoil surface. RANSFOIL reads coordinates data from a 1D XYZ file which describes the grid points or control points on airfoil as only input, then outputs grid and solution files in 2D PLOT3D format to record grid coordinates and airflow data and a report file to show aerodynamic parameters.
    Downloads: 8 This Week
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  • 3
    Qgama

    Qgama

    Adjustment of local surveying networks, binary builds for Windows

    The archive has been moved to https://ftp.gnu.org/gnu/gama/windows/ GNU Gama is a project dedicated to adjustment of geodetic networks. It is intended for use with traditional geodetic surveying which are still used and needed in special measurements (e.g., underground or high precision engineering measurements) . Qgama is a Qt based user interface for GNU Gama adjustment of geodetic networks in which XML input is complemented with a database. The most simple case is Sqlite3 file...
    Downloads: 0 This Week
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  • 4
    AOFlagger

    AOFlagger

    RFI detector and quality analysis for astronomical radio observations

    The AOFlagger is a tool that can find and remove radio-frequency interference (RFI) in radio astronomical observations. The code has been highly optimized for speed and accuracy. It is used by default for the LOFAR radio telescope and thus is in productional stage. The software can run in a fully automated way, but a graphical interface is provided to analyse results and tweak the strategy. The preferred input file format is the Casa Measurement Set (MS) format. I believe that the AOFlagger...
    Downloads: 0 This Week
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  • 5

    pydatascope

    Software oscilloscope using Python and tkinter

    Software oscilloscope using Python and tkinter. Supports multiple sources: socket, file, audio, USB. Displays data by samples, time or frequency. Scales the input automatically or manually.
    Downloads: 2 This Week
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  • 6
    Talend Spatial Module (aka Spatial Data Integrator or SDI) is an ETL tool for geospatial. Based on Talend Open Studio, input, output and transform geocomponents are available. IO components read/write GIS formats(eg.PostGIS, GeoRSS). Transformers all
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    Downloads: 11 This Week
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  • 7

    queXC

    Web based system for cleaning and classifying open text fields

    An Open Source, web based data cleaning and coding system. queXC takes a data file (such as questionnaire data) and cleans the text input fields by spacing and spell checking them. Operators then code text fields using new/existing coding schemes.
    Downloads: 1 This Week
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  • 8
    finds exact gain, directivity and input impedance of Yagi or log-periodic antennas (planar symmetric array of cylindrical dipoles, many driven elements) for a range of specified frequencies, integrates 2D for segments on the same element, moment method
    Downloads: 0 This Week
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  • 9
    JLibModbus - Java Modbus Library

    JLibModbus - Java Modbus Library

    A modbus library implemented in Java.

    JLibModbus is an implementation of the Modbus protocol v1.1b in java language. The library supports the most popular communication libraries (jssc, rxtx, jSerialComm, purejavacomm, java comm api); Maven dependency: <dependency> <groupId>com.intelligt.modbus</groupId> <artifactId>jlibmodbus</artifactId> <version>1.2.9.7</version> </dependency> Implemented MODBUS functions: 0x01 Read Coils 0x02 Read Discrete Inputs 0x03 Read Holding Registers 0x04 Read Input Registers...
    Downloads: 12 This Week
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  • 10
    VideoMan Library

    VideoMan Library

    C++ library for image acquisition and visualization

    Library for capturing video from cameras, 3d sensors, frame-grabbers, video files and image sequences. It can also display multiple images using OpenGL with different layouts. Easy integration with OpenCV, CUDA... Perfect for computer vision. Keywords: video capture, computer vision, machine vision, opencv, opengl, cameras, video input devices, firewire, usb, gige
    Downloads: 0 This Week
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  • 11

    JSiteDescriptor

    Binding site descriptor generation for SVM based classification.

    A set of java programs that extract coordinate and chemical information from PDB files. The binding site regions are extracted using grid based scheme. For binding site, spatio-chemical descriptor is generated based on PocketMatch algorithm of Dr. Kalidas (author of this project too).
    Downloads: 0 This Week
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  • 12
    ICE (Interval Calculator for Engineer)

    ICE (Interval Calculator for Engineer)

    Interval Calculator for Engineer

    ICE is a simple mathematical calculator with very useful shortcuts for Engineer: works natively with tolerance, can run Monte Carlo analysis, uses engineer notation, includes most of the day by day functions used by engineers.
    Downloads: 2 This Week
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  • 13

    ooPorter

    A Porter stemming or stemmer algorithm coded in ooRexx

    This is an ooRexx line-by-line port from Ansi-C to ooRexx of the stemming routine published by Martin Porter 1980. The original source code from Porter has been commented out and emulated by the corresponding (oo)Rexx code as far as possible. This is not an example of good or fast (oo)Rexx programming, it is merely a demonstration of the Porter stemming routine ported to ooRexx, use and modify as necessary. Input to the program is a textfile with words to be stemmed, one per line. Output...
    Downloads: 0 This Week
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  • 14

    bnf2xml

    simple BNF parser makes xml markup of matches

    bnf2xml a simple BNF parser that takes text as input, searches according to a BNF query file, and outputs text marked up by the xml labels that show context. bnf2xml is as simple to use as any text binary ie, awk(1) grep(1). bnf2xml does not require C API because it outputs simple xml labeling. README is visible on file dl page. EXAMPLE: $ echo "hi" | bnf2xml patternfile <word><alph>h</alph><alph>i</alph></word> or <gas>hydrogen iodide</gas> patternfile says how to find...
    Downloads: 0 This Week
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  • 15

    PyLogAnalyser

    A Python multiplatform tool to filter, colorise and analyse logs

    PyLogAnalyzer is a tool that receives an input log in black and white, a configuration INI file, which contains the list of rules to process the input, and an output file where to save the results. These rules permit to detect an input line according to a regular expression (regex) or line number range, filter it, pass it, colorise in foreground and background, columnise the groups of the regex and enable or disable the rule. The final goal of this tool is to ameliorate reading long...
    Downloads: 0 This Week
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  • 16

    CONMAP

    Geobody connectivity analysis tool in geosciences. New version: 2.0

    CONMAP is a console program to aid in geobody connection analysis in geosciences. It accepts input and outpts results in GEO-EAS (GSLIB) format for easy interoperability with most geoscience softwares. To get help in usage, simply run the program without arguments. CONMAP is a Java 1.7 program. Open a command prompt, go to the directory where you download CONMAP.jar and enter the command "java -jar CONMAP.jar <arguments>" (without quotation marks) to run the program. Geobody...
    Downloads: 0 This Week
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  • 17

    PolySim

    Polymer simulation utilites

    Polymer simulation utilites for bead coarse-grained models of polymers. Includes 1) lattice monte carlo. Many kinds of lattices are supported. It shouldn't be a problem to implement any new specific one (discrete models) 2) off-lattice monte carlo and molecular dynamics (continuous models) Latter one is rebuild of earlier version of simpatico (http://gemini.cems.umn.edu/research/morse/code/simpatico/home.php) project. Input and output are based on PDB file format which is better...
    Downloads: 0 This Week
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  • 18
    trafalgar.map

    trafalgar.map

    Open Street Map (OSM) tools, OSM/XML parser, tag extractor

    This is going to be a set of tools which is intended to be used with huge OSM files like the planet files in XML format. The parser reads directly from packed *.gz files and it is not needed to unpack the OSM/XML data files to the local disk. Now in 0.3.0: osm_tags: tag analyzer (like tag watch) osm_split: split osm file in single files for nodes, ways and relations and collect some meta information (will be used as input for other tools). osm_cut: create rectangular extracts tr_view...
    Downloads: 0 This Week
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  • 19

    OSGC - OpenSource Geospatial Catalogue

    OpenSearch GeoSpatial Catalogue

    OSGC is an Open Source implementation of an OpenSearch GeoSpatial Catalogue compliant to OGC 10-32r3 specification, developed by EGI.eu (http://www.egi.eu/) under the ENVRI (http://envri.eu/) project. OSGC provides a catalogue engine built on top of a PostgreSQL+Postgis database, which exposes a cusmizable OpenSearch interface. Most of the application configuration can be set from the Admin web interface, while Data Administrators have a separated Dropbox interface, which ease the...
    Downloads: 0 This Week
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  • 20

    datadensityplot

    Creates a data density plot of a 2 dimensional data distribution.

    Shows the data density of a 2 dimensional distribution. The problem of showing data density visually is not mathematically well defined, and there are several methods. The program uses sum of reciprocal squared distance to calculate density at each point, with a smear factor to prevent points going to infinity. The smear factor also controls the amount of clustering. There are several options for colour output. Input is via a csv (comma-separated values) file. Now there's a nice GUI...
    Downloads: 0 This Week
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  • 21

    galplot

    Plot GALPROP output

    Plot package for GALPROP https://sourceforge.net/projects/galprop Plots models and data for cosmic-ray spectra, secondary/primary ratios, gamma rays, synchrotron. Includes gamma-ray source population synthesis and corresponding plots. For gamma rays, convolves models with the Fermi-LAT response. This release is to assess interest. It requires many input data files (not included) which will be made available as required. With the data provided cosmic-ray spectra and ratios and source...
    Downloads: 0 This Week
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  • 22
    cCNN

    cCNN

    A fast implementation of LeCun's convolutional neural network

    Code of this library is partialy based on myCNN MATLAB class written by Nikolay Chemurin.
    Downloads: 0 This Week
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  • 23

    fluids-sh

    acquire fluid properties from the NIST Chemistry WebBook

    fluid.sh is a shell script which utilized wget to acquire fluid properties from the NIST Chemistry WebBook in a format suitable for further processing with shell scripts or e.g. xmgrace. It supports the full functionality provided by the website! The script takes the same input as command line arguments you need to enter on the web forms. It produces a ASCII text file containing the respective data points in columns headed by a well readable description. The advantage is that you do not need...
    Downloads: 0 This Week
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  • 24
    Command line fibonacci series calculation program.
    Downloads: 0 This Week
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  • 25
    QMC Logic Minimizer

    QMC Logic Minimizer

    combinational logic functions minimization

    ... variables. - You can also reduce the number of table rows. - It allows you to name the input and output variables. - The table can be exported to HTML file and then you can use it in e.g. MS Word. - This program provides a comfortable interface, you can change fonts and colors. - It works on MS Windows, GNU/Linux, Mac OS.
    Downloads: 1 This Week
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