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ReactionLab is a software package aimed for a unified computer environment to kinetic modeling of chemical reaction systems. The present implementation is founded on Matlab and Java-Swing GUI, with an interface to legacy C (and Fortran) codes.
A plugin for segmentation and analysis of images of vascular networks.
A plugin package for ImageJ that assists with quantification and characterization of vascular networks. The tool regularizes lighting, segments the vessels, and generates a skeletal description that reflects the biological structures of interest.
A visual interface for leJOS. RCXDownload automatically sets the JDK-, leJOS- and ClassPaths, compiles the chosen Java-Source, shows the compiler messages and is able to link and load both, the compiled classes and the leJOS-firmware. RCXDirectMode direc
jFITS is a Java Swing based application and applet for quickly viewing and performing simple operations on astronomical FITS formatted CCD imaging data.
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Java Evolutionary MultiAgent System allows user to solve multiobjective optimization problems using evolutionary algorithms with energetical elitism in multiagent system. It allows also to perform test using varied metrics.
Set of Ant filters that can be used to gather statistics from files or resources. It is mainly used for log files analysis. It allows to: - count inputs - count occurrences of each input - calculate average, max and min values of floats in input
Bitnets instantiates and operates on graphs and subgraphs of large complex networks, such as kinship networks. Bitnets consists mainly of a java library, a number of use examples and an interactive interpreted language interface.
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JOrigami is a collection of algorithms for computational origami.
Some algorithms studied by computational origami does not have an implementation. JOrigami solves the famous and funny fold-and-cut using Demaine's disk packing implementation.
OBOES (Open Biomedical Ontology-Based Enrichment and Search) is an information-theory-based platform that embeds new integrative methods allowing biologists to evaluate new hypotheses.
PARs is a bioinformatics tool for the analysis of cis-regulatory DNA sequences. Composed of two parts: a suite of sequence analysis algorithms for predicting cis-binding sites in DNA sequences and a GUI for visualisation and exploration of the results.
Qualiweb aims at providing semantic web metrics for modeling a website visitors needs according to a given taxonomy or document classification. Web metrics provided by Qualiweb give an indication of how successful each of the website topics have been.
JTextPro: A Java-based Text Processing tool that includes sentence boundary detection (using maximum entropy classifier), word tokenization (following Penn conventions), part-of-speech tagging (using CRFTagger), and phrase chunking (using CRFChunker).
JSim8086 is platform-independent Assembly Language Simulator of the Intel 8086 CPU. It was designed to be a learning tool (CAL) for first year Computing students who are learning Computer Systems Organisation and Assembly Programming.
Crawl-By-Example runs a crawl, which classifies the processed pages by subjects and finds the best pages according to examples provided by the operator. Crawl-By-Example is a plugin to the Heritrix crawler, and was done as a part of GSoC06 program.
PGAT is a graphical interface to PostGIS focused in mapping the geo-spatial operations defined in PostGIS. The spatial operations are performed in the server side unlike most open source GIS.