Search Results for "novel writing software"
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Showing 81 open source projects for "novel writing software"
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FourierFlows.jl
Tools for building fast, hackable, pseudospectral equation solvers
This software provides tools for partial differential equations on periodic domains using Fourier-based pseudospectral methods. A central intent of the software's design is also to provide a framework for writing new, fast solvers for new physical problems. The code is written in Julia. -
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Superstaq
Quantum software platform that is optimized across the quantum stack
This repository is the home of the Superstaq development team's open-source work. Our quantum software platform is optimized across the quantum stack and enables users to write quantum programs in Cirq or Qiskit and target a variety of quantum computers and simulators. -
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awesome-single-cell
Community-curated list of software packages and data resources
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc. List of software packages (and the people developing these methods) for single-cell data analysis, including RNA-seq, ATAC-seq, etc. Rapid, accurate and memory-frugal preprocessing of single-cell and single-nucleus RNA-seq data. Find bimodal, unimodal, and multimodal features in your data. Ascend is an R package comprised of fast, streamlined analysis functions optimized to address... -
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Gonum
Set of numeric libraries for the Go programming language
Gonum is a set of numeric libraries for the Go programming language. It contains libraries for matrices, statistics, optimization, and more. Gonum is a set of packages designed to make writing numerical and scientific algorithms productive, performant, and scalable. Gonum contains libraries for matrices and linear algebra; statistics, probability distributions, and sampling; tools for function differentiation, integration, and optimization; network creation and analysis; and more. We encourage... -
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CAMPARI
Software for molecular simulations and trajectory analysis
We are proud to introduce version 5 of CAMPARI. We have added a number of new features, most notably a Python interface for interpreting user-supplied code (with the help of ForPy), a novel trajectory storage standard (with the help of libpqxx/PostgreSQL), and a module for performing transition path theory. Naturally, CAMPARI continues to provide the reference implementation of the ABSINTH force field paradigm and implicit solvation model. CAMPARI is a joint package for performing... -
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libgwyfile
Read and write Gwyddion GWY files
Libgwyfile is a small, embeddable library for reading and writing of Gwyddion GWY files as foreign data. This means independently of Gwyddon and without adopting its data object model. -
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socan
A CAN Bus library for Linux that implements higher level functions.
This CAN bus library for Linux that implements higher level functions for writing CAN Bus applications. It is based on the SocketCAN interface, that is part of the Linux kernel. -
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SPSS i/o in Delphi
Delphi class for reading and writing SPSS SAV files
The TSPSSio class can be used to read a SAV file produced by IBM’s SPSS application, in uncompressed or byte-compressed format. It will allow you to write a SAV file in byte-compressed format. (Byte-compressed format is the defacto standard.) The class and its supporting software is written in Delphi XE and can be compiled without the need for external units. -
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ebfformat
An Efficient Binary data Format
EBF, which stands for Efficient Binary Format, is a binary file format for reading and writing binary data easily. Reading writing routines are currently available in C,C++,Fortran,Java, Python, IDL, MATLAB. A program called ebftkpy which has a set of utility functions to work with the .ebf files , e.g., viewing the contents and getting a summary, is also provided. The EBF specification is designed to be concise and easy to understand to make it easier for others to write their own code... -
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NUT Nutrition Software
nutrition software to record and analyze what you eat
nut is nutrition software to record what you eat and analyze your meals for nutrient composition. The emphasis is on personal dietary experimentation to determine the best possible diet. The software uses SQLite for a portable, os-independent application. -
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Pascalloid Calc
Hui or Pascal's Triangle into shaped Geometry, 3D
Pascal's Triangle has been taken into higher dimensions. The Five Platonic Solids are included in this software, along with various geometric algorithms to create a generative geometry system. Equations in combinatoric and algebraic forms are given. Tools to play with the data are given. There is now a way to create user-defined algorithms. Dodecahedral and Icosahedral Pascalloids are now geometrically perfect and include no 'folding errors'. A 'data only' data output mode allows users... -
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bwfinder
Exogenous feature extractor from brainwaves
..." utility, a set of EDF files with brainwave recordings in the "EDF/" directory and two empty destination directories named "founds/" and "losts/". This is my first Matlab/Scilab program, apologies for the poor style but Scilab lacks and bugs prevent the writing of a pure code. Use this software freely and fight the Remote Neural Monitoring system. -
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megatest
Run tasks/tests, get trustworthy pass/fail info rolled up
Distributed test running system. build for running simulations, quality assurance or similar where you need to run a large number of tests. Supports dependencies, iteration, disk space management and log file analysis. -
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Turn Visual Studio into a powerful HMI/SCADA development package by simply dragging and dropping, no coding required. DF1, Ethernet/IP for Allen Bradley PLC controllers, and many more drivers. Free
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SIVIC is an open-source, standards-based software framework and application suite for processing and visualization of DICOM MR Spectroscopy data. Through the use of DICOM, SIVIC aims to facilitate the application of MRS in medical imaging studies.
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Root Phenotyping Suite
Three different software tools for phenotyping plant root images
... scanning or by 3D digital camera imaging. The software provides a robust, efficient and accurate means of phenotyping of roots, by detecting individual root tips and classifying them as belonging to a primary or lateral root. RootGraph is a novel, fully automated and robust approach for the detailed characterization of root traits, based on a graph optimization process. The scheme, firstly, distinguishes primary roots from lateral roots and, secondly, quantifies a broad spectrum of root traits. -
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transitfeed
Tools for reading, validating & writing transit schedule info in GTFS
transitfeed helps to make public transit information projects more successful for agencies and other interested parties. It provides a library to help you parse, validate, and generate General Transit Feed Spec (GTFS) feed files. It contains several parts, including TransitFeed (Python package for reading, writing, and validating feeds); Feedvalidator (command line tool that checks a GTFS feed for problems); ScheduleViewer (application for exploring a feed on a map) and more; each... -
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chemfiles
Modern library for chemistry file reading and writing
Chemfiles is a modern and high-quality library for reading and writing trajectory files created by computational chemistry simulations program. These trajectories contains atomic positions, velocities, names, topology and sometimes more. Running simulations produce enormous amounts of data, which has to be post-processed to extract physical information about the simulated system. Chemfiles provides an interface to access this information which is - unified: the same code will work with all... -
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IPS Framework
A simple Python framework for loosely-coupled multiphysics simulations
The IPS Framework has migrated to https://github.com/HPC-SimTools/IPS-framework The IPS framework was developed to support loosely-coupled integrated modeling of fusion plasmas (and was originally the Integrated Plasma Simulator). However, the design is quite general, and is suitable for many scientific and engineering domains. In addition to plasma physics, it is also being used in the engineering of batteries. One of the novel features of the IPS framework is its ability... -
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pySBOL
SWIG-Python wrappers for libSBOL
pySBOL is a SWIG-Python wrapper around libSBOL, a module for reading, writing, and constructing genetic designs according to the standardized specifications of the Synthetic Biology Open Language (SBOL). This page provides binary installers for Windows operating system for Python 2.7 and 3.6. For installation instructions, visit: https://pysbol2.readthedocs.io/en/latest/installation.html For full documentation, visit: https://pysbol2.readthedocs.io/en/latest/index.html -
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Matlab/Octave Rotations Library
Library for working with 3D rotations in Matlab/Octave
The Matlab/Octave rotations library is a collection of functions, bundled as m-scripts, that address computations and numerical handling of rotations in 3D Euclidean space. The rotation representations that are supported are rotation matrices (Rotmat), Quaternions (Quat), intrinsic ZYX Euler angles (Euler), fused angles (Fused) and tilt angles (Tilt). Operations such as composition, inversion, ZYX yaw extraction, fused yaw extraction, random generation, equality detection, vector rotation... -
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Rotations Conversion Library
Library for working with 3D rotations in C++
The Rotations Conversion Library (RCL) is a collection of C++ functions that address common computations and numerical handling of rotations in 3D Euclidean space, including support for rotation matrices (`Rotmat`), Quaternions (`Quat`), intrinsic ZYX Euler angles (`Euler`), fused angles (`Fused`) and tilt angles (`Tilt`). In addition to the core competency of being able to convert between each of the representations, operations such as inversion, ZYX yaw extraction, fused yaw extraction,... -
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spectralHMM
A spectral method for inferring selection from time series data
***WARNING*** This software was migrated to: https://github.com/popgenmethods/spectralHMM Support and updates will only be available at this new address. This software implements the algorithms described in the following paper: Steinrücken, M., Bhaskar, A. and Song, Y.S. A novel spectral method for inferring general diploid selection from time series genetic data. Annals of Applied Statistics, Vol. 8, No. 4 (2014) 2203-2222 -
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SWire
A Stata plugin for connecting Stata with other software
SWire is a software interface enabling us to query Stata for the executing of basic operations like reading or writing data. The core of SWire is a Java plugin which functions as a server and it can be queried by using the HTTP protocol. SWire is in essence a wrapper around the Stata-Java API and all the functions relating to this API can, therefore, be externally called by clients. SWire can be interrogated on a local network and it accepts AJAX queries, thus enabling the development of web... -
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detectMITE
Detection of Miniature Inverted Repeat Transposable Elements
detectMITE - a MATLAB-based tool for detecting miniature inverted repeat transposable elements (MITEs) in genomes. [1] Who are we? Please visit website: http://bioinfolab.miamioh.edu [2] How to cite detectMITE? Ye C, Ji G, Liang C (2016) detectMITE: A novel approach to detect miniature inverted repeat transposable elements in genomes. Sci. Rep. 6, 19688. http://www.nature.com/articles/srep19688 Ye C, Ji G, Li L, Liang C (2014) detectIR: A Novel Program for Detecting Perfect...