Showing 42 open source projects for "java lab"

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  • 1
    OpenClinic GA

    OpenClinic GA

    Open Source Integrated Hospital Information Management System

    OpenClinic GA is an open source integrated hospital information management system covering management of administrative, financial, clinical, lab, x-ray, pharmacy, meals distribution and other data. Extensive statistical and reporting capabilities.
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    Downloads: 192 This Week
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  • 2
    Skippity

    Skippity

    Test and measurement automation for electronics, physics and more

    GET INVOLVED - see General Discussion Skippity is a versatile script-based automation controller for test and measurement instrumentation. It’s ideal for use on the test bench or for automating experiments in the lab. Skippity doesn't rely on instrument specific vendor drivers so it can communicate with both legacy and current commercial instruments and also with devices you've designed and built yourself. Once you've told Skippity about your instruments and their commands using simple...
    Downloads: 0 This Week
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  • 3
    As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the wiki: http://sourceforge.net/p/adamajava/wiki/Home/
    Downloads: 3 This Week
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  • 4

    MOIRAI

    Simple Scientific Workflow System for CAGE Analysis

    Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data....
    Downloads: 0 This Week
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  • 5
    MSqBAT

    MSqBAT

    Label-free protein quantification for LC-MS

    MSqBAT is a freely-available all-platform software application for label-free quantification of proteins from LS-MS data. It was developed in the lab of Dr. Christoph Rösli at the Heidelberg Institude for Stem Cells and Experimental Medicine (HI-STEM) and the German Cancer Research Center (DKFZ). It’s main features are 1) Label-free, MS1-based quantification 2) Support both LC-MALDI-MS- as well as LC-ESI-MS data 3) Supports both GeLC-MALDI-MS- and GeLC-ESI-MS data 4) Convenient, graphical user interface Acknowledgements The development of MSqBAT is kindly supported by YourKit Java Profiler.
    Downloads: 0 This Week
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  • 6
    PMM-Lab

    PMM-Lab

    Predictive Microbial Modeling plug-in for KNIME

    PMM-Lab is an open-source extension to the Konstanz Information Miner (KNIME). It consists of three components: • a library of KNIME nodes (called PMM-Lab), • a library of “standard” workflows • an HSQL database.to store experimental data and microbial models. Altogether these components are designed to ease and standardize the statistical analysis of experimental microbial data and the development of predictive microbial models (PMM). Users can apply PMM-Lab to proprietary or public...
    Downloads: 0 This Week
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  • 7
    GeOxygene
    GeOxygene aims at providing an open framework which implements OGC/ISO specifications for the development and deployment of geographic (GIS) applications. It is a open source contribution of the COGIT lab. at the IGN (the French National Mapping Agency).
    Downloads: 3 This Week
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  • 8
    klugerlab
    Projects and applications developed from the lab of Yuval Kluger at the Pathology department at Yale
    Downloads: 14 This Week
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  • 9
    CDSS for Allergy-Diagnosis

    CDSS for Allergy-Diagnosis

    A clinical Decision Support System for Diagnosis of Allergic Rhinitis

    A Clinical Decision Support System (CDSS) can be used for diagnosing allergic disorders. CDSS with rule based classification approaches, aid junior doctors and clinicians to diagnose and make reliable decisions. The results of an intradermal skin test is the input to the CDSS. The System predicts the presence or absence of ALLERGIC RHINITIS. The system is tailored to suit to the common allergens (inhalents and ingestants) prevalent in Chennai, South India. Intradermal Skin Test(IDST)data...
    Downloads: 0 This Week
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  • 10

    Lab Inventory

    Rediscover the Simplicity www.atgclabs.com

    Request new Lab Inventory feature or module and receive a free Single User version with new feature. Help us to improve Lab Inventory. We want to hear your feedback! https://www.atgclabs.com/products/li The Lab Inventory System is an innovative, easy to learn solution for research laboratories. You can quickly and easily upload your existing Excel based inventory and get started in minutes, manage laboratory inventory, place orders and keep track of them in one place. Lab Inventory...
    Downloads: 3 This Week
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  • 11

    Science & Engineering Inventory

    Rediscover the Simplicity http://www.atgclabs.com/

    Request new Lab Inventory feature or module and receive a free Single User version with new feature. Help us to improve Lab Inventory. We want to hear your feedback! https://www.atgclabs.com/products/li The Lab Inventory System is an innovative, easy to learn full-featured solution for research laboratories. You can quickly and easily upload your existing Excel based inventory and get started in minutes, manage laboratory inventory, place orders and keep track of them in one...
    Downloads: 0 This Week
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  • 12

    Lab Studies

    Rediscover the Simplicity http://www.atgclabs.com/

    Help us to improve Animal Studies. We want to hear your feedback! Request new Animal Studies feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/lp The Animal Studies stores and handles three classes of information: animal growth, phenotype screening and genotype analysis. Animal Studies requires minimal computing skills. Genetic and physiological data can be entered either manually or automatically when automated genotyping...
    Downloads: 0 This Week
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  • 13

    Lab Storage

    Rediscover the Simplicity http://www.atgclabs.com/

    Help us to improve Freezer Web Access. We want to hear your feedback! Request new Freezer Web Access feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/fw Freezer Web Access is a user friendly program designed to assist researchers with establishing an efficient system for storing frozen biological samples. FWA can track all of your research, development and process scale-up data in a single data storage platform, providing a...
    Downloads: 1 This Week
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  • 14

    Lab Processes

    Rediscover the Simplicity http://www.atgclabs.com/

    Help us to improve Lab Processes. We want to hear your feedback! Request new Lab Processes feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/lp Lab Processes is a comprehensive and straightforward application specially designed for biologists and chemists who need to conduct a wide variety of tests and experiments on animals. Lab Processes requires minimal computing skills. Genetic and physiological data can be entered either...
    Downloads: 0 This Week
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  • 15
    Systems Biology Simulation Core Library

    Systems Biology Simulation Core Library

    Accurate and efficient Java library that simulates biological models

    This project has been moved to https://github.com/draeger-lab/SBSCL.
    Downloads: 0 This Week
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  • 16

    Animal Studies

    Animal Studies

    Help us to improve Lab Processes. We want to hear your feedback! Request new Lab Processes feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/lp The Animal Studies module is a comprehensive and straightforward application specially designed for biologists and chemists who need to conduct a wide variety of tests and experiments on animals. Animal Studies requires minimal computing skills. Genetic and physiological data can be...
    Downloads: 0 This Week
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  • 17
    MD PnP | OpenICE

    MD PnP | OpenICE

    Open Source Integrated Clinical Environment

    As of 2015-06-23, this project may now be found at http://www.github.com/mdpnp/mdpnp. A prototype reference implementation of the standard for the Integrated Clinical Environment (ASTM F2761-2009)
    Downloads: 3 This Week
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  • 18

    JavaLabManagement

    Site for scientific lab management

    Aims - to try sourceforge in different aspects. This management include: - site building; - maintenance the laboratory; - scientific idea fixation.
    Downloads: 0 This Week
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  • 19
    Used to record and analyze some behavioural experiments in neuroscience (using usb webcam). it was developed in collaboration with neuropharmacology lab at Faculty of Medicine, Ain Shams University. it can use(JMF,OpenCV,JMyron & AGCamLib) for webcam
    Downloads: 2 This Week
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  • 20
    Laboratory Logbook
    The LabLog is a free tool to document projects running in a lab and to manage experimentally obtained data and its metadata. LabLog interfaces to a mySQL database that stores this information. Allows easy searching and retrieval of once recorded data.
    Downloads: 0 This Week
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  • 21

    TFAST

    Software for analysis of afSELEX-seq data

    Transcription Factor Analysis using SELEX with High-Throughput Sequencing (TFAST) is software developed by the Mobley lab at the University of Michigan designed to assist with transcription factor binding site discovery using data generated from aptamer-free SELEX-seq (afSELEX-seq).
    Downloads: 0 This Week
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  • 22

    LIMS-A

    Laboratory Information Management System with Complete Lab. Automation

    Laboratory Information Management System with Complete Laboratory Automation. This Project is created by Fatih University Computer Engineering Students .. Hasan SARMAN Hamadou Doudoun Niangadou Feugang Kemegni Fabrice it helps to automate complete lab system. its originally created to use on a R&D lab. if you wish you can use it on every kind of labs. it comes with Client Server based Access control Mechanism which cordinate access control with registered projects.
    Downloads: 0 This Week
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  • 23
    ImageJforXTF

    ImageJforXTF

    Open source software for processing XTF files

    This project was born from a stage at the "Signals and Images Lab (si.isti.cnr.it), Institute of Information Science and Technologies of the National Research Council of Italy". ImageJforXTF extends the open source ImageJ software with functionalities that allow to open and manage XTF files. This kind of files is used to record sonar and bathymetric data. An user can choose to open any file with extension ".xtf" so that the program parses it and shows the resulting image. Then the user can...
    Downloads: 7 This Week
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  • 24

    PHN/LAB file format converter

    Convert the format of speech label files

    Research in speech processing requires labeling and segmentation of speech signals, i.e., label files. Two useful formats for label files are the CSLU format (.phn extension) and the HTK format (.lab extension). This program converts speech label files from any of these two formats to the other one. Do this: 1- Provide the source directory (directory where the original label files are). 2- Provide the destination directory (directory where the new label files will be placed). 3-...
    Downloads: 0 This Week
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  • 25
    Screensaver is a Lab Information Management System (LIMS) for high-throughput screening of small molecule and RNAi biological assays. It is a Java/JSF/Hibernate/Spring web application that is actively being developed and used at Harvard Medical School. Note: The Screensaver project has moved to GitHub at https://github.com/hmsiccbl/screensaver.
    Downloads: 0 This Week
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