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Showing 58 open source projects for "it department"
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coronavirus
The coronavirus dataset
..., European Centre for Disease Prevention and Control, and Australia Government Department of Health. -
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ToxTrac
Free Animal Tracking Software
.... and Andersson, M. (2018). ToxTrac: a fast and robust software for tracking organisms. Methods in Ecology and Evolution. 9(3):460–464 Rodriguez, A., Zhang, H., Klaminder, J., Brodin, T., and Andersson, M. (2017). ToxId: an algorithm to track the identity of multiple animals. Scientific Reports. 7(1):14774. Contact Magnus Andersson, Department of Physics, Umeå University magnus.andersson@umu.se **Support** Alvaro Rodriguez, Main Developer a.tajes@udc.es -
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Dike-ED
Simulator for medical emergency departments
Discrete-event simulator for medical emergency department resource allocation. -
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XRD CUBIC
Simulate crystal cell length (a), Miller indices {h, k, l}, d-spacing
... and maximum diffraction angle as 2-theta (in Degrees) 3. Enter minimum and maximum unit cell length (in Angstroms) All the possible cubic crystal parameters, as well as diffraction angle with reference to d-spacing between the given Miller indices (h k l planes), will be simulated. Designed by: Dr. M Kanagasabapathy, Asst. Professor, Department of Chemistry Rajus’ College, Madurai Kamaraj University, Rajapalayam, (TN) INDIA 626117 Home Page: https://www.enote.page/2021/12/XRD-Cubic.html -
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ArcGIS-NRA-Tool
National Responsibility Assessment for Endangered Species/Habitatats
ArcGIS Tool for the Assessment of National Responsibilities for Endangered Species and Habitats The aim of the source code is to develop a National Responsibility Assessment Tool that can be used as plug-in for ArcGIS . Copyright (c) 2020 Yu-Pin Lin / 林裕彬 Department of Bioenvironmental Systems Engineering National Taiwan University No. 1, Sec. 4, Roosevelt Road Taipei 10617 Taiwan R.O.C. Office Phone: 886-2-33663467; Fax: 886-2-2368-6980 E-mail: yplin@ntu.edu.tw http://homepage.ntu.edu.tw... -
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Crystalsim - XRD hkl simulation
X-ray diffraction (XRD) analysis for hkl simulation of any crystal.
... can also be entered manually. Processed data can be saved as .csv file format. Designed by M Kanagasabapathy, Assistant Professor, Department of Chemistry, Rajus' College, Affiliated to Madurai Kamaraj University Rajapalayam (TN) India email: rrcmks(at)gmail.com -
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Rocstar Multiphysics Application
Parallel coupled multiphysics simulation application
... developed at the University of Illinois Center for Simulation of Advanced Rockets (CSAR) under Department of Energy ASCI funding. Ongoing development of Rocstar is conducted by Illinois Rocstar LLC with company IR&D and continued DOE SBIR funding. -
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PMCGPU
Parallel simulators for Membrane Computing on the GPU
...). This project has been initiated by the Research Group on Natural Computing (Department of Computer Science and Artificial Intelligence, University of Seville). PMCGPU was born inside the P-Lingua project, of the same research group. PMCGPU is a GNU project, so all the applications developed within it are released under the GPLv3 license. Just contact us if you want to participate. Please, visit the Wiki of the project for further information. -
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JCVI VIGOR
Viral Genome ORF Reader
VIGOR (Viral Genome ORF Reader) is a perl application to predict protein sequences encoded in viral genomes. VIGOR determines the protein coding sequences by sequence similarity searching against curated viral protein databases. Please see the wiki to see list of all supported viruses. This work has been funded in whole or part with federal funds from the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services under... -
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Advanced Vehicle Simulator
Advanced vehicle simulator
... will be submitted for consideration as the next canonical version of the ADVISOR software. ADVISOR is a registered trademark of the Alliance for Sustainable Energy, LLC, the manager and operator of the National Renewable Energy Laboratory for the United States Department of Energy. Trademark used under license. -
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WorldVistA EHR is based on and compatible with the U.S. Department of Veterans Affairs (VA) world renowned EHR, VistA (R). Please refer to the WorldVistA website: http://worldvista.org/Software_Download for download and installation instructions
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GMOL
A tool for 3D genome structure visualization
GMOL is an application designed to visualize genome structure in 3D. It allows users to view the genome structure at multiple scales, including: global, chromosome, loci, fiber, nucleosome, and nucleotide. This software was built upon the pre-existing Jmol package by Prof. Cheng's group. The software is developed in Prof. Jianlin Cheng's Bioinformatics, Data Mining and Machine Learning Laboratory in the Computer Science Department at the University of Missouri - Columbia, USA. The project... -
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MANTIS R Package
Multi-locus ANTIgenic Simulator R-package for multi-strain pathogens
This repository contains the most updated code version of MANTIS, the Multi-locus ANTIgenic Simulator R-package. MANTIS is developed and maintained by the Evolutionary Ecology of Infectious Disease (EEID) research group at the Department of Zoology, University of Oxford, UK. For theoretical background please refer to 'MANTIS: an R package that simulates multilocus models of pathogen evolution' (https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0598-9 OPEN ACCESS... -
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PADIC
A multilingual Parallel Arabic DIalectal Corpus
PADIC (Parallel Arabic DIalectal Corpus) is a multi-dialectal corpus built in the framework of the National Research Project "TORJMAN", led by Scientific and Technical Research Center for the Development of Arabic Language and funded by the Algerian Ministry of Higher Education and Scientific Research. PADIC is composed of 6 dialects: two Algerian dialects (Algiers and Annaba cities), Palestinian, Syrian, Tunisian, Moroccan) and MSA. Mourad Abbas Computational Linguistics Department... -
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coizfm
COI ZFM tools
Tools for Medical Physics Department -
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MGSyn
MGSyn - Automatic Synthesis for Industrial Automation
MGSyn (Model, Game, Synthesis) is an open-source tool which integrates game-based synthesis into model-driven development for industrial control and automation. It is served for research and educational purposes. MGSyn has been originally developed by Department of Informatics (Unit 6), TU München and fortiss GmbH and is now maintained by fortiss GmbH. The software is released under the GNU General Public License Version 3.0 (GPLv3). Please download the tutorial for step-by-step... -
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Projects and applications developed from the lab of Yuval Kluger at the Pathology department at Yale
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Fielddata Mgr
Land survey field crew data management for .RAW and .JOB file types.
Fielddata Mgr Overview This is a Python program, which means that one must install the open source freely available Python interpreter and a few required also open source, freely available modules that support the functionality of the program. The program "Fielddata Mgr", is customized for the Rick survey department, in such that it supports up to 9 chiefs, each having their own folder in one location, 2 supervisers, each with a PC on the network, and access to a main server... -
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GAVS+
An open platform for the research of algorithmic game solving
GAVS+ (Game Arena Visualization and Synthesis, Plus!) is an open-source tool which enables to visualize a broad spectrum of algorithmic games used in verification and synthesis, and offers a standard interface with utility functions to establish connection with engineering practice. It is developed by Department of Informatics (Unit 6), TU München. The tool is mainly is served for research and educational purposes. The software is released under the GNU General Public License (v3... -
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... suite to examine differential gene expression levels using an R and C++ hybrid computational pipeline." Source Code for Biology and Medicine, 2014 9:30] HeatmapGenerator source code is available at: https://github.com/Bohdan-Khomtchouk/HeatmapGenerator Bohdan Khomtchouk wishes to acknowledge the support of the Department of Defense (DoD) through the National Defense Science & Engineering Graduate Fellowship (NDSEG) Program. HeatmapGenerator is released under the GNU GPL.
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Accelerated Feature Extraction Tool
A fast GPU accelerated feature extraction software for speech analysis
A fast feature extraction software tool for speech analysis and processing. It incorporates standard MFCC, PLP, and TRAPS features. The tool is a specially designed to process very large audio data sets. It uses GPU acceleration if compatible GPU available (CUDA as weel as OpenCL, NVIDIA, AMD, and Intel GPUs are supported). CPU SSE intrinsic instruction set is used in cases where no compatible GPU present. The output files are stored in HTK format. The software is developed at Department... -
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Gen3D
A tool for 3D genome and chromosome structural model construction
Gen3D is an application designed to determine three-dimensional genome and chromosome models. It uses chromosomal contact data to construct three-dimensional conformations. This method can generate three-dimensional chromosomal models satisfying a large portion of chromosomal contacts. The software is developed in Prof. Jianlin Cheng's Bioinformatics, Data Mining and Machine Learning Laboratory in the Computer Science Department at the University of Missouri - Columbia, USA. The project... -
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EPx
A modified version of EnergyPlus v. 7 or 8.
EPx is a "modified version of EnergyPlus v. 7 or 8", a fork of the open-source building energy simulation engine developed by the US Department of Energy. This project also contains the canonical open-source releases of the unmodified EnergyPlus source code. -
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HHS Digital Media API Platform
Syndicate text and multimedia content with this API and storefront.
...) and the Department of Health and Human Services (HHS) Assistant Secretary for Public Affairs office (ASPA) developed these APIs in collaboration with the Food and Drug Administration’s (FDA) Center for Tobacco Products (CTP). The CDC, FDA/CTP, HHS/ASPA, and the National Institute of Health’s National Institute for Allergy and Infectious Diseases (NIH/NIAID) use these platforms. https://syndication.hhs.gov http://tools.cdc.gov http://tools.niaid.nih.gov http://tools.fda.gov -
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hbgm
'Hierarchical Bond Graph Modelling of Biochemical Networks'
Scripts and supplementary data for the manuscript 'Hierarchical Bond Graph Modelling of Biochemical Networks': Peter J. Gawthrop(1), Joseph Cursons(1,2), and Edmund J. Crampin(1-4). (1) Systems Biology Laboratory, Melbourne School of Engineering, University of Melbourne, Victoria 3010, Australia. (2) ARC Centre of Excellence in Convergent Bio-Nano Science, Melbourne School of Engineering, University of Melbourne, Victoria 3010, Australia. (3) Department of Mathematics and Statistics...